Nothobranchius furzeri (turquoise killifish): 107381114
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Entry
107381114 CDS
T05163
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107381114
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
107381114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_4
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
107381114
NCBI-ProteinID:
XP_015808143
UniProt:
A0A1A7ZYF4
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All DBs
Position
sgr06:complement(54219878..54302923)
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AA seq
925 aa
AA seq
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MVQKDHVEVGEGPVLDQEPDLEYLHVAGADRQAGAADGPPAMEEQGETSGHTTTASFTPP
VLREDSGGSDAVCRPSPPSNSAHAAGGDSDGEEGTSTHSKNTHQPLCRTPCVDLGTEGPP
DPPCVDTLIQSSGEQDPLQTSSTSEPASKARGKDYQAKLEFALKLGYSEETVRLVLSKLG
PDTLINDILGELVKLGTKPDGEQPVGILTSASSTSSSASSCGCSDVLEGQRSDSPCPSES
ICDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLECGHQNITVFVPAWRKEQSR
PDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRD
LANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVMPEQKKQPCPY
GKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVASKNQGDAGLVKSHSVPAGTIEA
KKGAPKRQSDPSIRALSYSDAEEKLLAKSQKGSLCGSSSSSSSSSIGCSMSLAPGGPLSG
HGLPSDQQSRLVTHLPAPGHDLYPHCESPDISYYSVTRAYSGLSLTSRRSPDCRFPNDTD
LRHSSMGSAGSECGSESSVSCGSSCDSYSERSCPGCPPDPLLEDSVHFANPHSWLYPHHM
SSNHELCAIHAAEYPSIQHSHTSNPALHTYHLSAACVHEPPPEAPPKRPLYPLPPHLQHQ
PLAARSSCPGDYHSVPQSNHQPPGSPLGRCLAPTRAESVSDSHLYENLSAPHHHHRPKAL
PNWDSYYRHPLLPSSRYESSTFQSPPDTRQSSWHAPPWPQDSYTQHHSSHPALHPSPTHY
LSPPPPHSPHSPYSSHLTVPSHGPPPYPESPGHSRYEDIREKVYMNLCNIFPSELVSRVM
SRSPHITDPQQLAAAILAEKSQTSY
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggttcagaaggaccatgtggaggtgggagaaggccctgtccttgaccaggaaccggac
ctggagtatctccacgtagctggggctgaccggcaggctggcgccgctgacggaccccct
gctatggaggagcagggggagacctccggccacaccaccacagccagtttcactccacca
gttcttcgggaggacagcggtgggtccgacgcagtgtgcaggccgtcgccaccttctaac
tccgcacacgctgcaggtggagactcagacggagaagagggtacgtctactcacagtaaa
aacacccaccagccgctgtgtcggaccccatgtgtggacttgggcactgaggggcctccc
gaccctccgtgcgtggacacgctcatccagtcctcaggtgagcaggaccctctgcagact
tcctccacgtctgagccggcgtccaaggcgagaggaaaagactaccaggccaagctggag
tttgctctgaagctgggctactccgaagagacggttcgactggtgctgtccaagctcggc
cccgacaccctcatcaacgacatcctgggagaactggtcaaactgggcaccaagcctgac
ggcgagcagcccgttgggatattaacttccgcctcatccacgtcctcttctgcgtcgtcc
tgtggctgctccgatgtgctggaaggccagcggtcggactcgccctgcccttcagagtcc
atctgcgaccaggacaacctgcggccgattgtggtggacggcagcaatgtggccatgagc
catggcaacaaggaggtgttttcctgtcaaggcatccagctggctgtagattggttccta
gagtgcggccatcagaacatcaccgtttttgtgcctgcgtggaggaaagagcagtcccgc
cctgatgccccaataacagatcaggagatcctgcgtcgcctggagaaggagaaaatcctc
gtcttcactccctcacggcgcgtacaaggcaggcgcgtggtctgctatgacgaccgcttc
atagtcaagctggcttatgagtcagacggcatcatcgtctccaatgacaactacagagac
ctggctaacgagaagcctgagtggaagaagttcatagacgagcgtctgctcatgtactcc
ttcgtcaatgacaaattcatgccacctgatgaccctctcggtcgtcacggccccagttta
gacaacttcctgaggaagaagcccgtcatgcctgagcagaagaaacaaccctgtccatac
ggaaagaagtgcacctacggccacaagtgtaagtactaccaccctgagagaggggcccag
cctcagcgggcggtggcggatgagctgcgtgctagcgccaagacctgcgtcgcctccaag
aaccagggggacgctggacttgtcaagagccacagcgtgccagctggcaccattgaggca
aaaaaaggtgcccccaaaaggcaatcggaccccagcattcgagctctgtcctacagtgat
gctgaagagaagctgctggctaaaagccagaagggcagcttgtgtggcagcagcagtagc
agctccagcagcagcatcgggtgcagcatgtctttagccccaggcggacctctgtccggt
catggccttccatcagaccaacagtccagattggtgacacacctcccagcccccggccat
gatctctaccctcactgtgagtctccagacataagctactactctgtaacgcgggcctac
tctggcctgagccttacctcccgccggagcccagactgccgcttccccaacgatacggac
ctgcgacacagttcgatgggctcagcgggttctgaatgtggcagtgaaagcagcgtcagc
tgtggcagcagctgcgactcctacagtgaaagatcctgtcctggatgtcctccagaccca
ttactggaggacagcgtccactttgccaacccccacagctggctgtatcctcatcatatg
tcctccaaccacgagctgtgtgccatccacgctgccgaatacccaagtatccaacacagc
cacacgtctaaccccgcgctccacacctaccacctcagtgcagcatgtgttcacgagcct
ccaccagaggctcctccaaagcgacccctctaccctttacctccccacctccaacaccaa
cccctggctgctcgctccagctgcccaggcgactaccactcagttccccagtccaaccac
caacctcccggctctcctcttggccgctgcttggccccgacacgagctgaaagcgtgtct
gactcccacctttacgagaacctctctgcaccacaccatcaccatcgacctaaagcttta
cccaactgggactcgtactacagacaccccctgctgccatcgtccaggtatgagtcatct
acctttcagagcccgcccgacacgcggcagtcatcctggcacgccccaccgtggccacag
gacagctacacccagcatcactcctctcacccggctctccatccttcacccacgcattac
ctgagcccccctccccctcactctcctcactcgccgtacagctctcacctcacagttccc
tcccacggacctcccccttacccggagtcccccgggcacagccgctacgaggacataaga
gagaaagtgtacatgaatctttgtaacatcttcccctcggagctggtgagccgcgtgatg
tccagaagtccccacatcactgacccccagcagctggctgctgccatcctcgcagagaag
tctcagaccagttactga
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