Nothobranchius furzeri (turquoise killifish): 107381233
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Entry
107381233 CDS
T05163
Name
(RefSeq) usherin-like
KO
K19636
usherin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nfu03037
]
107381233
Cilium and associated proteins [BR:
nfu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
107381233
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
fn3
Laminin_G_3
Pur_ac_phosph_N
Laminin_G_2
EGF_LMN_ATRN
FN3_DSCAM-DSCAML_C
Laminin_G_1
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
107381233
NCBI-ProteinID:
XP_015808295
LinkDB
All DBs
Position
sgr07:complement(3351919..3505902)
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AA seq
1787 aa
AA seq
DB search
MSEWLKPGPMNSLNHQNCHLEKCPMKNGATQKQKRFVPKTLQILSRGCWTIWLKGSDENG
ENLSEMYFEKPGEIMQMGQCVWIKNPIFGVLWTSPWKNRDENMKKQANLFRPRWHHVFLC
FHLLLLSLCAKPASSQGHFPRMENIAAFKPVSASPPWSTCGVPERSSSCQPPSSKAELLT
CYQAVCDQECPYRSSTPPHAPLLLAAHRGNCVTEDITDTRPGTRTETGISLDGLPAGSGS
VLFQPGKDGCAVTPPPQSLGARGSLTLALWIKPSSSEEMMLLEKSFGKRLVFSLTVSEKS
VTLRYGHSKGQTSLTVSFSTEGRLLPEKWSHLTLQIYDRRASLFLDGLEEDGTPFDTKHL
TNALSDVGEDATMWVGLGANGSNQFIGRMQDFRFYPATLTNREIVELFSGVLPQLHVQSE
CRCPPTHPRVHPLVDRYCIPNAVEDTTNDRVLRLNLNAHPLSYINDQDMGTTWQSKIMTA
QELDEGLTVTVDLVNGQYQVFYIIVQFEGLLPESVVIQRRAFNLSDPDSAIKTEQLWLDW
QYMARNCSVFDMQNNGWLPRPDSVNCLQLPSDVPFSGGNFTFSLLTTHPSVRPGYNDFYR
TPALQEMVQATHVRIHMRGQYHTKTAGVNPQHRHFAIREITISGRCDCHGHADHCDTSVS
PYRCLCLPESHTTGHNCQHCALLYNDKPFRSGDQLQPMNCRPCQCNGHAHSCHYDIRADD
QPHEHYRGGGGVCDHCMHNTTGKNCELCINGFFRLVDSDPSSADVCRPCDCYTAGTVDGN
MDCPQIGGQCQCKAAATGRRCADCLPGWFGLSAKNPNGCLSCNCSDLGVIKTSATAVSHC
NQHTGQCHCKLHVTGALTLTTHKPEKRISLHLFRKTFLCLFLFPGLSCDRCAFGFWNLSH
PDGCIPCDCDPLGSLSSFCEPEGGQCECKPGVGGRQCGSCGSGLYGLKLDGSCAPCNCSH
EGTVPGTDCDPYTGQCVCKACCTLSHFHIGTREHVEGRRCDYCLRGYHTLERRNSLGCLP
CVCDISGTVPEGVCDMWTGQCPCKEGVEGLHCTSCRHNYYNRSLDLLNGLSQGCVPCICD
PRGTVMGSVCDRNTGQCVCVPTRHGKDCSSCRPGFYLSADHSVCLECDCHPMGSVQQNCE
SRSGQCVCAHPSVAGRQCNQCREMFFGFNPGLGRCQPCACDQVGSVNGSCNPDTGVCVCK
LLVSGEKCDSCQPGASHFDPENHFFGCSKAPSQQPAPSGFALSYSSISLSWNPPDSPNSN
RLKYTLIRDGQSVYTIHSRYPFRPESYEDHGLFPFTNYSYWLITASVAGETLSAAASYQT
LGAPPAADQLSLNLLGRPGPTSASFNWSTPRNDTGPVERFVLSSMESFHEAEPVIHYTGS
STDAVAGGLKPFTQYTAILEVCSSGGCTSSPPLSFLTAAAPPQNQPPPQVTATGPYTLQA
VWDPPSQPNGIITRYDVFLRGPMDSQNLSGVLDEKKVFHSSGWLDPSVYMERSQANSTLS
PPENRAIVKNLQAFSTYQLRVVSISSAGGVSSEWTTAHTMEGVPEFVAPPDVSALSSTSL
KVTWNSTEGHGVIAGGQVTEFWVNMLTEQTSNPYAPPVVSQVLHRMAASSQPFYIVKELK
PYHVYNFTITLCTRMGCITSLPGTGQTLPAVPTGLSSPQIHPINDTTIQIDWDPPATPNG
PNPLYQVERTDLSFSDPREPVVRGTRFPGNGYYQFPSNTLPSNTDFTGVQLSFKTWSPDG
LLLCAFSPEDQVEFLALQIKNGQPYFLFDPQEMPGWCSRASPAVSET
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtggctaaaacctggacccatgaactccttaaaccatcaaaattgccactta
gagaaatgcccaatgaagaatggagcgactcaaaaacaaaaaagatttgttcccaaaaca
ttgcaaatattgagcaggggatgttggacaatttggttaaaaggaagcgatgaaaatggg
gaaaatctttcagaaatgtattttgaaaaaccaggtgaaatcatgcaaatgggccaatgt
gtttggataaaaaatcctatttttggcgttttgtggacttcaccctggaaaaatcgagac
gaaaacatgaagaagcaagcaaaccttttcaggccaaggtggcatcacgtcttcctgtgc
ttccatcttctgttgttaagcctttgtgcaaaacctgcttcatcacagggacattttcca
cgaatggagaatattgcagctttcaaacccgtgtccgcctctcctccttggtccacctgt
ggtgttccagagcggagcagctcctgccagccaccttcttccaaggctgaactactgaca
tgttatcaagctgtttgtgaccaggaatgcccctatagatcctccacaccaccacatgcc
ccactgctgctagctgcacacaggggtaactgtgtaactgaagacatcactgacactcgt
cctggtactagaacagaaaccggaatcagtttggatgggcttccagctggatctggtagt
gtgctgtttcaaccaggaaaagatggatgtgccgtcacccctcccccacagagtctagga
gcacggggttctctcaccttagcattgtggataaaaccaagttcttctgaagaaatgatg
ctgctggagaagagttttggaaagcgtctggttttttctctgactgtgtcagagaagtcc
gtgaccctgcggtacggtcactcaaagggtcagacgtctctcacagtcagctttagcaca
gagggacgacttctaccagagaagtggagtcatctcactctgcagatctatgatcgacgt
gcgagtcttttcctggatggccttgaggaggatgggacaccatttgatacaaaacacctg
accaacgcactcagtgatgtcggcgaagatgccaccatgtgggtgggacttggcgctaat
gggtctaatcagttcattgggcgaatgcaggactttagattttatcccgccactttgacc
aacagggaaattgtggagttgttctcaggagtcctgcctcaactccatgtccagtctgag
tgtcgctgtcctccgactcacccgagagtacaccctttggttgacagatactgcattccc
aatgcggtggaggataccactaatgaccgggtgttgaggctgaatctcaatgctcacccg
ctgagttacatcaatgatcaggacatggggaccacctggcagtctaagatcatgactgca
caagaactggatgaaggactcacagttactgtggatttggttaatggacaataccaggtt
ttctacattatagttcagtttgagggtcttctgcctgagtcggttgtgatccagcgaagg
gcgtttaacctctcagaccctgacagcgccattaagaccgaacagctctggttggactgg
cagtatatggccagaaactgcagtgtgtttgatatgcagaacaatggatggttacctaga
ccagactcagtcaactgtctgcagttgcccagtgacgtgcccttctcaggaggaaacttc
acattcagtctgctgaccacacatccaagcgtgaggccggggtataatgacttctacaga
acgcctgccctgcaggagatggtccaagcaacccacgtccgaattcacatgagaggacag
taccacactaaaacagctggggtcaatccacaacacagacactttgccattagagagatc
acaatcagtggcagatgtgattgtcacggccatgcagaccactgtgacaccagtgtgtcc
ccgtaccgctgcctatgcctcccagagagccacaccacaggccacaattgccagcattgt
gcattgctttacaatgacaaacccttcaggtcaggtgatcagctccagccaatgaactgc
cgtccttgtcagtgtaatggccacgcccactcttgccattatgacatccgagctgatgac
caaccgcatgaacactacagaggcgggggaggagtctgtgaccactgcatgcacaacacc
acagggaagaactgtgagctgtgcattaatgggttcttcaggctggtggactctgatcct
tcttcggctgatgtgtgccggccctgtgattgctacactgctggaactgttgatggcaac
atggattgtccccagattggaggtcagtgtcagtgtaaggctgcagcaacaggtcgtcgg
tgtgcagactgtttgcctggttggttcggtctcagtgctaaaaatccaaatggctgcttg
tcctgcaactgtagtgatttgggtgtcatcaaaacctcagcaacagcagtttcccactgt
aaccagcacacagggcagtgtcactgtaaacttcacgtcacaggcgccttgactctgacc
actcacaagccagagaagaggatttcacttcacctttttaggaaaacatttctttgtctt
tttctctttccaggtctatcatgtgaccgctgtgcgtttggtttttggaacctttcccac
ccagacggctgcatcccttgtgactgtgacccgttgggttccctcagctcgttctgtgag
cctgagggcgggcagtgtgagtgcaaacctggggtgggaggccgacagtgtggctcctgc
ggcagcggcctgtatggtttaaaactcgatggatcctgtgcgccctgtaactgctcacac
gaggggacagtacctggaacagactgtgatccttacacaggacagtgtgtgtgcaaggca
tgttgtactttgtcacattttcatattggaaccagagaacatgtggagggccgtcgctgt
gactattgccttcgtggttatcacaccctggagcgccgtaactccctgggctgcctgccg
tgcgtgtgcgacatcagtggaactgtgccagagggtgtatgtgatatgtggaccggacaa
tgcccatgcaaggaaggggtggagggtttacactgtaccagctgtcgtcacaattactac
aacagaagtttagacctcctgaatggtttgtctcagggatgtgtgccatgtatctgcgac
cccaggggaacagtgatggggtcagtctgtgacaggaacacaggacaatgtgtctgtgtc
ccaacacgtcatggaaaggactgcagtagctgccgacctggcttctatctctcagcggat
cacagcgtgtgtttagagtgtgactgccatccgatgggttcagtgcaacagaattgtgag
agccggtctggacagtgtgtgtgtgcgcatccctcagtggctgggcgacagtgtaatcag
tgtcgagagatgttctttggcttcaaccctggtctgggaagatgtcagccttgtgcgtgt
gaccaagtgggcagtgtcaacggttcctgcaatccagacacaggggtgtgtgtatgtaag
ctgctggtatctggagaaaagtgtgattcatgccagccaggagcgagtcactttgatcct
gaaaaccatttctttggttgcagtaaagctccatcccagcaacctgctccatcaggcttc
gctcttagttactcctccatctctctctcttggaatccacctgattcaccaaactcaaac
agactcaaatacacgctcatcagagatggacagtcggtgtacaccatccacagtcgctac
cctttcagacctgaatcctatgaggaccacggtttgtttccgtttaccaactactcttac
tggctgataacagccagtgtagctggtgagacactaagtgcagcagcatcgtaccaaact
ctaggtgcaccccccgctgcagaccaactgtctttaaacctcctggggcgaccaggtcca
accagtgctagctttaactggagcacaccgagaaatgacacgggaccagttgagaggttt
gtgttatcttccatggagtcctttcatgaagcagagccagtcattcactacacaggctca
tctacagacgctgttgcaggtggcctgaagcctttcacacaatacacagcaatactggag
gtgtgttcatctggagggtgcacctctagcccaccgctgtcttttctgacagctgctgcc
cccccacagaaccaacctcctccccaagtcactgctactggaccttacacgctgcaggct
gtttgggatccccctagtcagccaaatggtatcataacgagatatgatgttttcctgcga
ggcccgatggactcacagaacctgtctggtgttctggatgagaagaaagtgtttcacagc
tctggatggctggatccaagtgtctatatggaaaggagccaggccaacagcacactgtca
cctccagaaaacagagcaattgtgaagaatcttcaggcgttttcaacctaccagctgaga
gttgtgagcatcagcagtgcaggaggtgtctcatctgagtggaccactgctcacactatg
gagggagtcccagagttcgtggctcctccagacgtgtcagcactgtcgtccaccagtctc
aaagtcacatggaactctactgagggtcacggggtcatagcaggaggacaagtcacagaa
ttctgggtcaacatgctcactgagcagacctccaatccctacgcccctccagttgttagt
caggtgttgcataggatggcagcgtcatcacagccgttttacatcgttaaagaactgaag
ccttaccatgtgtacaacttcaccatcactctctgcacaagaatgggctgcatcaccagt
ctgccaggcacaggacaaaccctaccagcagtgccaacaggactgtcctcaccccagata
catcctataaatgatacaaccattcagatagactgggacccccctgcaactcctaacgga
ccaaatccactctatcaggtggagagaacagacttatccttctccgacccacgagaacca
gttgttcgaggaaccagatttccagggaatggttattatcagtttcccagtaacactctg
cccagtaataccgacttcacaggtgttcagttgagtttcaagacttggtccccagatggc
ctcctgctttgtgccttctccccagaagatcaagtggagtttctggctcttcagataaaa
aatggacagccatactttctatttgatcctcaggagatgcccggctggtgcagcagggct
tctccggctgtctcagagacgtga
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