Nothobranchius furzeri (turquoise killifish): 107381246
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Entry
107381246 CDS
T05163
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107381246 (chd9)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107381246 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
Chromo_MIT1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
107381246
NCBI-ProteinID:
XP_015808313
UniProt:
A0A9D3BLG7
LinkDB
All DBs
Position
sgr07:7726784..7844590
Genome browser
AA seq
2953 aa
AA seq
DB search
MDFFDDTNLFVGDLEGLEEDDFPSGPSLVDELNLSSDFEPLPVASLGPGKHQDMMPTASS
HQVMPCYNQPMPHFIGTKAQNPMGQAFSGSGSSGAIPEQHGQYHNAALSQVTQSNGLFCN
NRSPMWGNHDQNGNAFHPLAQPQQQVCHQQLHSQQLHVRQHPQQQSHAHHHPHHHQEEQQ
HRLQQHLLNQHQQISTPAVSLQQQQHHSFTFHQRSQNNCQHQMQPSHPQVQQQLPVTETH
FHSRALPSKSYLESQGRYQLLRRGQAFSASGLEDSHLAFPMHSSSVVHSLPTCSVGSANA
YQPAEFPAYPGEPEIPGLSQQSLSSTCRPIASGAACQFQPSALMSQLHSRTAVSRADECP
FRALRSSGEIQGNCKSSEMLDKPVSCYPSIANHLPSEQPLSCGAINTNGYQAFGDNYLSS
EAQDGDLEGLGPPDLLPDLLPQLQDDCRDQNKSSCSWVDSSLKRGLEKSQATAVETKDEK
PRKNANGPGSQVRVPSPTLKSSSSSSSSSSSSSSSSSSSSEKRAPRRKQHQMEPNLQEKQ
EKANRIISEAIAKAQQRGEKNIPRVMSPESFPSSSAQHKARRREHKGNGKTRSKEKACIV
PSSKPKQKSKIGKIVIKFGKKKKRKPESSEEESDGDTPLRHTFKDDDSKRRSNRQVKRKK
YAEELEARLSDDDVKVIVKAKKSNTGASKDPAVQLFVENPTEEDAAVVDKIMSSRIVKKE
ASPGVMVEVEEFFVKYKNYSYLHCEWATEQHLEKDKRIQQKIKRFKMKQAQRALFFTDME
EEPFNPDYVEVDRVLEVSYCEEKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEF
EQLQAVKPDSRRVERPPANMWTKRDQSREYRNSNTLRDYQLEGVNWLLFNWYNRRNCILA
DEMGLGKTIQSITFLEEIQRVGIKGPFLIIAPLSTIANWEREFHTWTHLNVIVYHGSMVS
RQMLQQYEMYFRDAQGRVIRGAYKFQAVITTFEMILGGCPELNAIEWRCTIIDEAHRLKN
KNCKLLEGFKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENNFMQEFGDLKTE
EQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKG
AGQSNMPNLVNTMMELRKCCNHPYLIKGAEEKILEDFREVHSPAAVDFHLQAMVQSAGKL
VLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQKRYLYERIDGRVRGNLRQAAIDRF
SKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQDKAVKVY
RLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSLGGGTGGGAAQQQLSKKEVEDLLR
RGAYGAIMDEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISL
DDPNFWDKWAKKADIDMEMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGESENDET
KPKLRRNERLNNYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRALLA
YCLVHYRGDDKIKSFMWDLIAPTEDGRTKELQNHLGLSAPVPRGRKGKKMKTQSSSFDIH
KAEWLRKHNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQKVLDGVDSSE
VKIWVPDPDHSELPALWWDAVADKCLLLGVFKHGYEKYNTIRADPTLVFLDRVGRPDEKA
IAAEQRGNDFMDGDVDDPEYKPAPALIKDDMEDDASSPGDLVVSDNAGDAAPVTEGQTSY
WPSPSVLTARLRRLITASQRFTKTRQILHIHQAQSHTQQTTMLPAPLYPLPPTLNDTLNP
KMAAKIERQQRWTRREEADFYRVVSTFGVVFDPSLGRFDWTKFRAMARLHKKTDESLQKY
LCAFTAMCRRVCRLPPKEGDSSVDPSLTIQPITEERASRTLYRVELLRQVREQVLRHPLL
YERLRLCQMSSDLPVWWEVGTHDRDLLIGAAKHGVSRTDYHILRDPDLSFMAAQRNYSQM
KTAAPPQQRTSTPLLQPQHQVASSLITGSPLPLPAQREADPCGAEPKVEPASEEEEEAKP
KQGDSWSPPRPPATPTGLEKKPFPATSDSDRQMVAARTKPLTPNSSERKPKKASKRGRRE
ARRGSEYNSDGSSSSSSSRSSSSSSSSSSSSSRTGSSSSSSSSSCSSGSSSSSSSSSSSD
DSESEGEEAKKKIPVATSVKGFDEDSVASLSTMQDETQDAHMAENGVTNSSSHPFQGGGY
MMAASYWPKDRVIINRLDSICQAVLKGKWPGPRRVYEPGGAVTSFYTTKLLDSANSLSED
PSASPQGSKVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPTKRPLESEEGPQAQQQYLA
RLHELQSASDTGLADITKPQSSFQTAPPPLSGQSRPNGALDFQPIAKKRRGRRKNVEGMD
LLFMNKNQVSVAPSQAPSGWGGIGQVGMPGAAVPGCSQSVTPILVETETRVPVINLKDGT
RLAGDDAPMRKELEQWLKEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNK
IDVNSLTGEERVQIINRRNARKIGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYL
PESMFDRILTGPIVPEEVSRRGRRPKNPLAKVAAAAAAPNPAATGLGLNPLATNGLLSGM
DLSSLQAFQQNLQSFQSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMTGLPNLLGMS
SLLGKTTQEGAGGSEETTKGTGEPPAAPPHTSDAKGERTEGLNTTPSSTSSCASSTTSTQ
SASAAPAASGHSLTLNPLLISSMLYPGMLLTPGLNLPVSATQLQSSNSDPSSLPPAAPPA
ASPSSSKEKQQPRERDGEEDETPEEAGDEEDEEERAEQKENSGPESSTKADSSSSDSGSS
SSSSDDSDSSDED
NT seq
8862 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttgatgacaccaacctctttgttggggatttggaaggactggaggaggac
gacttcccttcgggaccttcacttgttgatgagttaaacctcagttcagactttgaaccc
ctcccagtagcatcacttggcccagggaaacaccaagacatgatgccaacagcctcatcc
catcaagtcatgccctgttacaatcagccaatgcctcacttcataggcaccaaggcacag
aatcctatggggcaggcgttttctggctccgggagctcaggcgccattccagagcaacat
ggccagtaccacaatgccgctctgagccaagtcacccagtccaacgggttgttctgcaac
aacagaagtccaatgtggggcaatcatgaccaaaatgggaatgcgttccacccgttggct
caaccgcagcaacaggtttgtcatcagcaactgcatagccagcaacttcacgtgagacag
catcctcagcagcagagccatgctcatcatcatcctcatcatcatcaagaagagcaacag
cacagacttcagcagcacctgttaaaccagcaccaacaaattagcacaccggcagtttcc
ctgcagcaacagcagcatcacagtttcacttttcaccagaggagtcaaaacaactgccag
catcagatgcagccatctcacccgcaggtgcagcagcagctacctgtaaccgagacccac
tttcattccagagctcttccgagtaagtcttatctagaaagtcagggtaggtaccagttg
ctcaggagaggtcaggccttttctgcatcaggactggaagactctcacctggcattcccc
atgcattcatcatctgttgttcactccctgcccacatgctctgttggttctgctaacgcc
taccaaccagccgagttccctgcctaccctggcgagccagaaatacccgggctcagtcag
cagtcgttgtcttcgacgtgtaggcctatcgcatcaggggcagcatgtcagtttcagccc
tcggccctcatgagtcagttgcactcgagaacagcagttagccgagcagacgagtgtccc
ttcagagcactgcgctcttctggggaaatccagggaaactgcaagtcatctgagatgctt
gataaaccagtgagttgctatcccagcattgctaatcacctgccctctgagcagcctctg
agctgcggggcaatcaacactaatggataccaagcctttggagacaactatctgtcgtca
gaggcccaggatggagacttggaaggactggggcctcctgaccttttgcctgacctgctg
cctcagctgcaggacgattgcagggatcagaacaaatccagctgttcgtgggtcgattcc
agcctgaagagggggcttgagaaaagccaagcgactgctgttgagacaaaggatgaaaaa
cctcgaaagaacgccaatggtcccggtagccaggtgcgggtccccagtcccacgctgaag
agcagctcttcatcctcctcctcctcctcatcatcctcatcttcgtccagctcctcgtca
gagaaaagggcgccacggaggaagcagcatcagatggagccaaatctgcaggagaagcag
gagaaggccaacaggattatatcggaggctatcgctaaggcccagcagcgcggggagaag
aacatcccacgggtcatgagcccagagagcttccccagctcctcggcccagcacaaggcc
cgtcgccgtgagcacaaaggcaacggcaagacccggtccaaggagaaggcctgcatcgta
ccctcctccaagcccaagcaaaaatccaagatcgggaaaatcgtcatcaagtttggaaaa
aagaaaaaacggaagccggagtcttcagaggaggagtcggatggtgacactccccttcgt
cacacatttaaggatgacgactcgaagaggcgctccaaccgtcaggtgaagaggaagaag
tacgctgaagagctggaggccaggctgtcggacgacgacgtcaaggtcatcgtcaaagcc
aagaaatccaacacaggagcatccaaggaccctgctgttcagctgtttgttgagaatccg
actgaggaagatgcagctgttgtcgacaaaatcatgtcttcccgcatcgtaaagaaagag
gcgtctccgggggtgatggtcgaagtggaggagttctttgtaaaatacaaaaattattcc
taccttcactgcgagtgggccacagagcagcaccttgagaaggacaagaggattcagcag
aagatcaaacgcttcaagatgaaacaggcacagagggcactcttcttcacagatatggaa
gaggagccgtttaacccggactacgtagaggtggacagggttctagaggtatcctattgt
gaggaaaaagacacaggagaggaagtggtgtactacctggtgaagtggtgctcgctgcca
tacgaggacagcacctgggagttgaaggacgacgtcgatcagagcaagatagaggagttt
gagcagctgcaggcagtgaagccagactcgcgcagggtggagcgacctccagccaacatg
tggacgaagagggatcagtcgagggaataccggaacagcaacaccctcagggattaccag
ctggagggggtcaactggcttctgtttaactggtataacaggcgcaactgcatcctggcg
gacgagatgggcctgggaaagacaatccagtccatcacattcctggaggagatccagcgc
gttggcatcaaggggcccttcctcataattgcccccctctccaccatcgccaactgggag
cgcgagttccacacttggacccacctcaacgtcatcgtctaccacggaagcatggtcagc
aggcagatgctgcagcagtacgagatgtacttcagggatgcacagggtcgtgtgattcgt
ggcgcctacaagttccaggccgttatcaccacgtttgagatgatcctgggcggctgcccc
gagctcaacgccatcgaatggcgctgcaccatcatagacgaggcgcatcggctcaagaac
aagaactgcaagctgctggagggcttcaagctcatgaacctggagcacaaagttctgctg
acgggcacccctcttcagaacacggtggaggaacttttcagcctcctccacttcctggag
ccggcgcgcttcccctcggaaaacaacttcatgcaggagtttggagacctcaagacagaa
gagcaggtccagaaacttcaggccatcctgaagcctatgatgctgcggcgtctgaaggag
gacgtggagaagaagctggctcctaaggaggaaaccatcatcgaggttgagctcaccaac
atccagaagaaatactaccgcgccatcctcgagaagaacttctccttcttggctaaagga
gccggtcagtccaatatgcccaacctggtcaacaccatgatggagctgaggaagtgctgc
aaccatccctacctcatcaaaggggcagaagagaagattctggaggatttcagggaagtc
cacagtcctgctgctgttgacttccacctgcaggcgatggtgcagtccgccgggaagttg
gtgcttatcgataaactgctgccgaagatgaaggcaggaggccacaaggtcctcatcttc
tcccaaatggtgcgctgtctggatatcctggaagactacctgattcagaaaaggtacttg
tacgagcgtattgatggacgtgttcgcgggaacctgagacaggctgcaatagaccgcttc
agtaaacccgactcggaccgctttgtgttcctgctgtgcacgcgagccggcggcctggga
atcaacctgaccgctgcagacacctgcatcatcttcgactctgactggaacccgcagaac
gacctgcaggctcaggctcgctgccatcggatcggtcaggacaaggcggtgaaggtgtac
cgcctcatcaccaggaactcgtacgagcgggagatgttcgaccgcgccagcctcaagctg
ggcctggacaaggctgtgctgcagagcatgagcggtcgcgacaacagcctgggagggggc
accgggggaggggctgcgcagcagcagctgtccaagaaggaggtggaggacctgctccga
cgcggcgcctacggggccatcatggacgaggaggacgaaggggccaaattctgtgaggag
gacatcgaccagatcctgcagcgcagaacgaagaccatcaccatcgaatccgagggacga
ggatccacttttgccaaggccagttttgttgcatccggaaaccgcacagacatctctctg
gatgaccccaacttctgggacaagtgggccaaaaaggctgacatcgatatggaaatggtc
aacggcagaaacagcctggtgatcgacactccccgtgtacggaagcagacccggcccttc
agcgccaccaaggacgagttagccgaactctcagagggtgaaagcgagaacgatgaaacc
aagccgaagctcaggcgaaacgaacgcctgaacaactacggtcgcaccgagtgcttcagg
gtggagaagaacctcctggtttatggatggggccgctggaaggatattctcaaccacggc
cgcttcaagaagcagctaacggagtgggatgtagagtccatctgcagggccctgctggcc
tactgcctggtccattaccgtggcgatgacaaaatcaagagcttcatgtgggacctcatc
gctccaacagaggacggacgcaccaaggagctgcagaatcacctgggcttgtcggctcca
gtccctcgaggcaggaagggaaagaagatgaagacccagtctagttcttttgacatccac
aaggccgagtggctccggaagcataaccccgagcacatgctgcaggacgacggctacaag
aagcacctgaagcaccactgcaacaaggtgctgctcagggtcagaatgctctactacctg
aagcaggaggtgatcggaagccaggcccagaaggttctggatggtgtcgattccagtgag
gtgaagatctgggtcccggacccggatcactcggagctgccggccctgtggtgggatgca
gttgctgataaatgtctgctgctcggcgtcttcaaacacggttatgagaagtacaacacc
atccgagcggacccgactctggtcttcttagatcgagtgggacggccggacgagaaggcc
atcgctgccgagcagagaggcaacgatttcatggacggggatgtggacgatccggaatac
aaacccgctccggcactcataaaggacgacatggaggatgacgcctcctctcctggagac
ttggtcgtctccgacaacgccggcgacgcggctccagtgacggaaggccagacctcctac
tggccctccccgtccgtgctgacggccagactccggcgactgatcacggcctctcagcgc
ttcacgaagacccggcagatcctccacatccaccaggctcagtctcacacccagcagacc
accatgctgcccgcgccgctctatccgctgccccccacgctcaacgacaccctcaacccc
aagatggctgcaaagatcgaacggcagcagcggtggaccaggagagaggaggccgacttt
taccgggtcgtttccacgtttggagtcgttttcgacccgagcctcggccgcttcgactgg
accaagttccgggccatggctcggctgcacaagaaaaccgacgagagtctgcagaagtac
ctgtgcgccttcaccgccatgtgtaggcgagtgtgtcgcctgccgcccaaagaaggagac
tcctcagtggatccgtctctgaccatccagccaatcacggaggagcgagcgtctcgtacc
ctttacagagtcgagctgctgcgccaggtgagggagcaggtgctccgacacccgctactc
tacgaacgcctccggctgtgccagatgagctcggacttgcctgtgtggtgggaggtcggg
actcacgaccgcgacctgctaatcggcgccgcgaagcacggcgtgagtcgtaccgattac
cacatcctccgagatccggacctcagcttcatggctgcccagcggaactacagccagatg
aaaacggcggcgccgccgcagcaacgcacatccacgccactcctgcagcctcagcaccag
gtggccagctcgctgatcaccggctcaccgctgcccctgccggcccagagggaggctgac
ccctgtggggctgagcccaaagtggaaccagcctcagaggaggaggaagaggccaaaccg
aagcagggagacagctggagcccgcctcgacccccagcgacccccacgggcctggagaag
aagccgttccccgcaacgagcgacagtgacaggcagatggtggcggcacgaaccaaaccg
ctcacgccaaactcctcagagaggaaacccaagaaggccagcaagaggggccgcagggag
gcccggaggggctccgagtacaactcagacggctcctcctcaagctcttcatcccgctcc
tcttcatcctcatcatcatcctcttcgtcatcgtcgcgtaccgggtccagctcttcgtcc
tcatcgtcttcttgctcctccggctcctcatcttcatcgtcctcctcatcctcctctgat
gacagtgaaagcgagggcgaggaagcgaagaagaaaattcccgtggcgacgagcgtcaag
ggctttgatgaggacagcgtggcgtcgctgagcaccatgcaggatgaaacacaagacgcc
cacatggctgaaaacggcgtcaccaacagctcctcccacccgttccagggaggcgggtac
atgatggctgcgtcctattggccgaaggaccgtgtgatcatcaaccgcctggacagcatc
tgccaggcggtgctgaagggcaagtggccgggcccgcgtcgggtctacgagcccgggggc
gccgtgacctccttctacaccaccaagctgctcgacagcgccaacagcctgagcgaggac
ccctctgcctcgccacaggggtcaaaggtgaccaagcatgttgcagaaaacaaggagttc
tcagtaaaactcaacgatcaggagggcgggctgaagctgaccttccagaagcagggtctg
cctacgaagaggcccctggagtctgaggaaggcccccaggcccagcagcagtacctggcc
cggctacacgagctgcagagcgcttcagacacgggcctagcggacatcaccaagcctcag
agcagcttccagacggctcctccacctctttctggtcagagcagaccgaatggagccctg
gacttccagcccatcgctaagaagcgacgagggaggaggaaaaatgtggaagggatggac
ctgctcttcatgaacaagaatcaggtgtcagttgctcccagtcaggcaccttcagggtgg
ggggggattggtcaggtgggcatgcctggagctgctgtgccaggctgcagtcagagcgtc
actccgatcctcgtagaaacggagaccagggtccccgtgatcaacctgaaagacggcacc
cggcttgcgggagacgacgcccccatgaggaaagagctggagcagtggctgaaggagcat
cccggctttgtggcagacacgggagccttcatccccggagtaaataagatgcaaatgcag
ttccacttccaggacggtcggcccaaacaaaaacggcaccgctgcagaaacccaaacaag
atcgatgtcaacagtctgacgggagaggagagggtccagataatcaaccgcagaaacgcc
cgcaagatcggtggagcctttgctcctcctctcaaagatctgtgccggttccttcaggag
aacccggagtacggggtcccgcctgagtgggccgacgtggtcaaacagtcgggttacctc
ccagagagcatgttcgaccggattctgaccggaccaatcgtccctgaggaggtgagccga
cgtgggcgtcgaccaaagaatcccctggcgaaggtggctgcagctgcggcggcgcccaac
ccggcggccaccggtctgggtttgaaccctctggcgacgaacggcctcctctctggaatg
gacctctccagtctccaggccttccagcagaacctgcagagttttcagtccctgcagctc
accgctggcctgatgggtctgccgtcagacgccagcaacctggccgccagcaacttggct
gcaatgtttcccatgatgctctctggcatgaccggattgccaaacctgctcggtatgagc
agcttgcttgggaagacgactcaggaaggcgccggaggctctgaggaaacgacaaaggga
accggagagccaccggctgctccgcctcacacttcagacgctaaaggagaaaggacagag
ggcttaaacacgactccttcctccacttccagctgtgcttcctccaccacctccacacaa
agtgcttcagctgctcctgcagcctccggtcactcactcactcttaaccccttgttaatt
tccagtatgctgtatccagggatgcttctcactccaggccttaacctacccgtgtccgcc
acgcagctccagagctcaaacagtgacccctccagcctcccgcccgctgctccccccgca
gcctccccgtcgtcgtcaaaggagaagcagcagccgcgggagagggacggagaggaggac
gagacgccggaggaggctggagacgaagaggacgaggaggagagggcggaacaaaaagaa
aacagtggtcctgaaagttcaacaaaagccgactcttcctcgtcggactctgggagcagc
tcctcatcctccgacgattcggactccagcgacgaggactga
DBGET
integrated database retrieval system
