Nothobranchius furzeri (turquoise killifish): 107381412
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Entry
107381412 CDS
T05163
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107381412 (ctr9)
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
107381412 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_7
TPR_11
TPR_6
ARM_TT21_5th
ARM_TT21_4th
TPR_Slam
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
107381412
NCBI-ProteinID:
XP_015808553
UniProt:
A0A1A8V9H7
LinkDB
All DBs
Position
sgr07:18488741..18499965
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AA seq
1150 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYK
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLDR
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFRESRDVFAQVREATAEISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQLLKEQEEKQKREVEEQKKLLEQRALFVEKTKNLLTFAEGLKEASK
EKKKGGGGRRKKGGDTDDFVNDDSDEDLPLKKKKKRKGSSSEHDDDEDGEKKKKRRRPTK
GGDDSDDEGASRPKKQRKLKEGRKRAEKPQPERMPPSLKGKIKSKAIISSSESSSDEDGL
KIAEDRQRDSGSGSDEEGGHRKRIASDSDSDGGKKSSGSEAGSPRRPAGSEDDESGSDRP
VKKRKVQSDSEQSNNESKRSQSGSDDDSRPASPVVASDRGSEAGSDTGGSPRRSDNGSEQ
EGSNNEDDSE
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggctccatagagatcccgttacgggacacagatgaggtcatcgagctcgat
ttcgatcagttgccagagggagacgaggtcatcagtatcttgaagcaggaacatacgcag
ctgcacatctggatcgctttggcgttggagtactacaagcagggtaaaacagaggacttt
gtcaagcttttggaagcagcgcgtatcgatggaaacctcgactacagagaccacgagaag
gaccagatgacgtgtctggatacgctggcagcttactatgttcagcaagctcgtaaagag
aaaaacaaagatgccaagaaagagctcatcacacaggccaccctgctttataccatggca
gacaagattatcatgtatgaccagaaccatttgttggggcgagcctgtttctgcctgctg
gagggagacaaaatggaccaggctgatgctcagtttcactttgtactcaaccagtccacc
aataacattcccgctttgcttggtaaggcctgcatctccttcaacaaaaaagattacaaa
ggagcactggcgtactacaaaaaggctttacgtacgaaccccggctgtccagcggaggtg
aggctggggatgggccactgttttgtcaagctcaacaaactggagaaggcccgcctggct
ttcggtcgagccctggagcttaactccaagtgtgtgggagcgttggtgggtctggcggtt
ttagagctcaacaacaaagaggcggactccatcaagaacggagttcagctcctgtcgcgg
gcttacaccatcgaccccagcaaccccatggtgcttaaccacctggccaaccacttcttc
ttcaaaaaggactacagtaaagtgcagcatctggccctgcacgcttttcacaacacggag
gtcgaagccatgcaggctgagagctgctatcagttagcgcgctcgtttcacgttcaggag
gactatgaccaggcgtttcagtattattaccaggccactcagtttgcctcatccaccttt
gtgctgcccttcttcggtttgggacaaatgtatgtgtatcgtagagacaaggaaaatgca
gcacagtgctttgagaaggttttaaaggcctaccccaacaattatgaaaccatgaaaatc
ctgggttccctctatgcggcatctgacgatcaggagaagagagacatcgcaaaaggtcac
ttgaagaaggtgacagagcagtatccagatgatgtggaagcatggattgaactggctcag
atcttggagcagacggacatccaaggtgcgctgtcggcgtacggcacagccactcgcatc
ctgcaggagaaggtgcaggcggacgtccccccagagatcctcaacaacctgggggctctg
cacttcagactgggaaacttaggggaagcgaagaaatattttcttgcttccctggatcga
gccaaagctgagggagagcacgacgagcattattacaacgctatttctgtcaccacctcc
tacaatctggcacgtttgtatgaagctatgtgtgaattccacgaggctgaaaaactctac
aaaaacatcctcagagaacatcccaactatgtcgactgttatttgcgcctcggagcgatg
gctcgtgacaaagggaacttctacgaagcttctgattggttcaaagaagcgctgcagatc
aatcaggatcacccagatgcctggtctctgatcggaaaccttcacttagccaaacaggaa
tgggggccgggtcaaaagaagtttgagcgtattctgaaacagccgtccactcagaatgac
acgtactccatgttggctctgggtaacgtgtggctgcagacgctgcatcagcccaccaga
gaccgtgaaaaggaaaagagacatcaggaccgagcgctggcaatttacaaacaagttctg
cgaaacgatgccaagaacctctatgcagccaacggcattggtgccgtgctcgcccataaa
ggttatttccgagagtcgcgggacgtgtttgctcaggtgagggaagccacggcggaaatc
agcgacgtctggctcaacctggctcacatctacgtggaacagaagcaatacatcagcgcc
gtgcagatgtacgaaaactgtctgaagaaattctacaaatatcaaaacaccgaggtgctg
ctgtatctagcgagagcgctcttcaaatgcgggaagctccaagagtgcaaacagatgctg
ctgaaggctcggcacgtggcgcccagcgacacggtgctgatgttcaacgtggccctggtg
ctgcagagactggccactctagtgctgaaagacgagaagagcaacttgaaggctgtgctg
agcgccgtcaaagagctggagctggctcacagatatttcagttacctcagcaaagctgga
gacaagatgaggtttgatctcgctcttgctgcatcagaggccaggcagtgctccgacctt
ctgagccaggctcagtaccacgttgctagagccagaaaacaggacgaagaggagaaggag
cttcgtgccaaacaagagcaggagagggatctgctgcgccagcagctgttaaaagaacaa
gaagaaaagcaaaagcgagaggtggaggagcagaagaagctcctggagcagagagctttg
ttcgtggagaagacgaagaacctgctcacctttgcagaagggctcaaagaggcttccaag
gagaagaagaagggaggtggaggacgtcgtaagaaagggggcgacacggacgactttgtt
aacgatgattccgatgaggacctaccactgaaaaagaagaagaagagaaagggcagcagc
agtgagcatgatgatgacgaggatggagagaagaaaaagaagaggaggagacccactaaa
ggaggagacgacagcgatgatgagggagcatctcgaccgaagaagcagcgtaaacttaaa
gaaggacgcaaaagggcagaaaagcctcagcctgagcgaatgccgccatctcttaaagga
aagatcaaatccaaggcaatcatctcatcttctgaatcctcatcagatgaggatggactg
aaaatagctgaagacagacaaagggacagtggctcgggatctgacgaagagggtggccac
aggaagcgtatcgcatctgacagcgactctgatggaggaaagaaaagctccggcagcgaa
gctggcagccctcggcgccctgctggctcggaggatgatgagtcgggcagcgatcgcccc
gtgaaaaagaggaaagtgcagtccgactcggaacagtccaacaacgagagcaagaggagt
cagtcaggatcagatgatgattccaggcctgcttccccggtcgtcgcatcagacagagga
tctgaggctgggtctgacaccgggggctccccacgccgctctgacaacggatcagaacag
gaggggtctaacaatgaggacgacagcgagtaa
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integrated database retrieval system
