Nothobranchius furzeri (turquoise killifish): 107381442
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Entry
107381442 CDS
T05163
Name
(RefSeq) caprin-1-like isoform X1
KO
K18743
caprin-1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107381442
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107381442
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
107381442
NCBI-ProteinID:
XP_015808605
UniProt:
A0A1A8AX96
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Position
sgr07:16176137..16191311
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AA seq
639 aa
AA seq
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MPSAAVGNNAVQCAIPDLGSGSHSETMRQFFGVIDKKVRNMEKKKSKLDDYQEKKNKGER
LNQDQLEALSKYQEIINNLDFARELQKSFLALGQEVQKAVKKSARREQLQREELEQRRLK
TVLELQFLLDQLGDDGVRQDLKQPGASGAPLLTDGDLTSFDEFYKLVGPERNCDIRLTEQ
YEEASLHLWALLEGRDKPVAGTTYKSLKKTLDKLLLSGYFDRPEANQNGACETEETQEEP
PAVAAEAVVTAEPPSEPEGLINENYIEAVKVEPTEFVNRQFASETSYSSTDQDQVEEWSV
ETQMSSLQHHPSAQLAPEPAVTVNPVAPTPATDPVVRKQAVQDLMAQMQGTYNFMQDSML
EFDGQALDPAIVSAQPMKPLQAVDLHPMGGPSIVHSEPRLSQTTTVSGPQESSRASMSLS
AEHLAASCSLSTAFPPVSKPTHSGGINVNAAPFQSVQAVFNLNAPVPPPTDGQAEPLQQS
SQFPGGFAQGFNSQSEDAVEQLEMPQERLQSVVGGFQSQDQVIPSAGNDEDSSAGAGFGQ
SSQSFYNSRAVPRGGPRNARGVMNGYRGSSNGFRGGYEGYRPSFSNAPPTSGYGQTQFSA
SRDYSNSSYQREGYQQGYKRGTAQGSRGLSRGNAQAMRS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcagctgttggcaacaatgctgtccagtgtgccatcccagacctggggagt
ggaagtcactctgagaccatgaggcagttttttggtgttattgacaaaaaagtccggaat
atggaaaagaagaagtccaaactggacgactatcaagaaaaaaagaacaaaggagagaga
ctgaatcaggatcagctggaagctttgtcaaagtaccaggagatcatcaataaccttgac
tttgctcgagaactgcagaagagcttcctggcattgggccaagaggttcaaaaagcggtg
aaaaagtctgctcgacgggagcagctgcagcgggaggagctggagcaacggcggctgaag
accgttttggagcttcagttcttactggaccagttaggagacgacggcgtacgacaggac
cttaaacagcccggtgcttcgggtgcccctctgctcaccgacggtgacctcacctccttt
gatgagttttacaaactggtggggcctgagaggaactgcgacatcaggttgactgagcag
tatgaagaggcctcgctgcacttgtgggcgctgcttgagggccgagacaagcctgtggca
ggaaccacatacaagtctctgaagaagactctggacaaactgctgttgagtggttacttt
gacagaccagaggctaatcagaacggtgcatgtgagacagaagagacgcaagaggagccc
cctgctgtggcggctgaggctgtggtgactgcagagcccccatcagaacctgaaggacta
attaacgagaactacatcgaggctgtaaaggtggaacccacagagtttgttaacagacag
tttgcttcagaaacttcttacagcagcacagaccaagaccaagtagaggagtggtcagtg
gagactcagatgagctctctccagcaccacccctcagcacagctggctccagagccagcc
gttactgtgaacccagtcgctcccactcctgccactgacccggtggtcagaaaacaggcg
gtgcaagacctcatggcccagatgcaagggacatacaactttatgcaggactccatgttg
gaatttgatggccaggctctggacccagccatcgtttctgcacagcccatgaagcctctg
caggctgttgacttgcatccgatgggtggcccttcaatagtccactcagaaccaaggctt
tcccaaacaactacagtatctggaccacaagaatcctcccgagcttctatgtctttgtca
gctgaacatttggctgcctcatgttccttgtctaccgccttcccacctgtctccaaaccc
acccactctggaggcatcaatgtgaacgcagcacctttccagtcagtgcaagcggttttc
aacctgaatgcacccgtacctccacccaccgacggtcaagcagaacctctgcagcagtcc
agccagtttcctggtggctttgctcagggctttaacagccaatcggaggatgccgtagag
cagctggaaatgccacaggaacggttacagtcagttgttggtgggttccagtcccaagac
caagttatcccctcagcgggaaacgatgaggattcctctgccggagcagggtttgggcag
tccagccagtccttctacaacagcagggccgttcccagaggtggacccaggaatgcccgg
ggagtgatgaatggataccggggctcctccaatggattcagaggaggatatgaaggatat
cgtccttccttttcaaatgctcctcccaccagtgggtatggccaaacccaattcagtgca
tcccgggactattccaacagcagctaccagcgggagggataccagcaaggctacaagcga
ggcactgctcaaggatctcggggtttgtctcgggggaacgctcaagcaatgcgatcctaa
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