Nothobranchius furzeri (turquoise killifish): 107381642
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Entry
107381642 CDS
T05163
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107381642 (caprin2)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107381642 (caprin2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
107381642
NCBI-ProteinID:
XP_015808904
UniProt:
A0A1A8B7I0
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Position
sgr01:61348000..61370936
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AA seq
907 aa
AA seq
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MVQLSPSPTLEDSSCPSAERQEELEKQEEQGPAGGLNAPQLDVSTAYHQGYETYIEDGLI
CLKHKIRNLEKKKLKLKDYKRRLGQGEELNRDQMVAVEKYEEVLHHLDLARELHKTLDGL
TQTLLKAQKNAVKKEQMVKMEAERRRLIVVLQLQHLLRGLQQEHVQKDLLAGCKHAPRIL
AEKLNSMVQLAALLGISRDTKISLEEQMEQAAGVYMDLLEGKDKPVAGSTYKLLKDELLR
LLNYKYFSCLPPPPTETPDLLLSSSRQIATKSESNESSKKFYRLRLSEEEASPPLNWRED
FQAKREQEPPDSWDMHLQDGPLSPQSAPAKSWKGAATFIPKVHHVTSKKISAEDKPRKEK
KAKAEQTSKSENEMNIPVEVFNSPSSLPKDPILRKQHLEDLLNKIHCSFSFMQDSLLDGE
NSVSNGTPRLKRQSSGTPPLDPLAHGGLRSPLDVLPTTMHSTPLPPRHMECKVRLTNGDQ
SLRTSDLDPSSVNLPHEPLQAEDIKMFSSPPLFRRKSAIAALDKNGSPYTPVTDSEKQSP
SSRARSSSSFSPQPEPFSTPPSSRAPMSAQFQNIQSVFKVGSALPQNGDPQGNSNSAVFS
GPSYNTASTQTPPEFAPPDDEPQLGYQADYAVSGQMFLSPGQSGGGPSRSNQSYSRGSVR
GNARGGKGLAQSFRSSGWNRGSYTPQTHHRDPGLFYAARDSGYQHSYRRGGGRHNSSVAW
SDSSQVSSPDREGMCPMVDSGVGDSMSVSTVEVPLTPHSHPPSLLPMQLYPLSHPLRVAF
TASRTANFAPGNLDQPIVFDQLHTNLGEMYDSHIGRFTCPVNGTYVFIFHILKLAINVPL
YVNLMRDDEVMVSAYANDGAPDHETASNHAILPLFQGDQVWLRLHRGAIYGSTWKYSTFS
GFLLYQD
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccatccccgaccctggaggactcatcctgtccgtcagcagagagg
caggaggagctggagaagcaggaggagcagggaccagctgggggtctgaacgccccacag
ctggatgtgtccactgcttaccaccaaggatatgaaacctacatagaagatggtctcatc
tgtttgaagcacaaaatccgtaacttggagaagaagaagttaaaactgaaggactacaaa
aggcggctgggccagggtgaagagctgaaccgggaccagatggttgctgtggagaagtat
gaggaggttctccatcacctggatttggctagagaacttcacaaaaccttggatggttta
acccaaacgttgttgaaggcccagaagaatgcagttaaaaaggagcagatggtaaaaatg
gaggcagagaggaggcgtctgatcgtggtactgcagctccagcacctcctccgtgggctg
cagcaggagcatgtgcagaaagacctgctggctggatgcaagcatgcccctcgcattcta
gctgagaagctgaacagcatggtccagctggctgcgctgttgggcatcagcagggacacc
aaaataagtttggaagagcagatggagcaggctgcgggggtgtatatggaccttctggag
gggaaagacaaacctgtggctggatccacatataagctgctgaaagacgagctcctcagg
ctgttaaactacaaatacttcagctgtcttccacccccacccactgagacaccagattta
ttactgagctcatcacgccagattgccacaaagtctgagtcaaacgaaagttccaaaaag
ttttacagacttcgtttgtctgaggaggaggcgtccccccctctgaactggagggaggat
ttccaggctaaaagggagcaggagcctcctgacagctgggatatgcatctccaagatgga
ccgttgtctccacagtctgcacctgccaaatcatggaaaggtgctgctacattcatacct
aaagtgcaccatgtcacctctaagaaaatatctgctgaagacaaaccgagaaaagagaag
aaagccaaagcggagcaaacttccaagtcggaaaatgaaatgaacataccagtagaggtc
ttcaactctccgtcttccctaccaaaagaccccattcttaggaagcagcacctagaagac
ctattgaataagatccactgctccttcagtttcatgcaggactccctcctggatggtgag
aactctgtgtccaacggcacacccagactgaaaagacagtcatctggaacgcccccacta
gacccactagcccatggaggtttaagaagtccgttggatgttctacccacaacgatgcat
tccaccccgttacctcccaggcatatggaatgcaaagtcagactaaccaatggggatcag
agtctgaggactagtgacctggacccgtcttcagtcaaccttccacatgagcctcttcag
gcagaagacataaagatgttttcctcccctcccctctttcgcaggaagtcggccatagct
gccctagacaagaacggctctccttatacgcctgtaaccgattcagagaagcagtcgccc
agtagcagggcgagatccagttcgtccttctcaccccagcccgagcctttctctacacct
ccctccagccgagcccccatgtctgcacagtttcagaatatccagtcagtattcaaagtg
ggttcagctttaccccagaatggagacccacagggcaattcaaactctgcagttttctct
gggcccagttacaacactgccagtacccagacccctccagagtttgctcctccagatgat
gagcctcagctagggtaccaagcagactacgcagttagtggccagatgtttctgtctcct
ggccagtcaggtggaggtccaagtcgatctaaccagtcctactctagaggatctgtgaga
ggtaatgcacgtggtggcaagggactggcacaaagctttcgctcctctgggtggaacaga
ggatcctacacgccccagactcatcacagggatcctggtcttttctatgctgctagagac
tcaggatatcaacattcttacagacgaggaggagggaggcataactccagtgttgcctgg
agcgactcttcccaggtcagcagtccagacagagagggaatgtgtccaatggtggattcg
ggtgttggagattccatgtctgtctctacggtggaggtcccgctcactccacacagccat
cctccatccttactgcccatgcagctctatccgctctcccatccgctacgagtggctttc
accgcctctcgcactgccaactttgccccaggcaaccttgaccagccgatcgtgttcgac
cagctgcacactaacctgggagaaatgtacgactctcatatcggccgcttcacttgtcct
gtgaatgggacctatgtcttcatcttccacattctgaagctggctatcaacgttcccctt
tacgtcaacctcatgcgtgacgacgaggtgatggtgtctgcgtacgccaatgatggagcc
ccagatcacgagactgccagtaaccacgcgatcctccctctgttccagggagaccaggtg
tggctgaggctgcatcgtggggccatttatggcagcacctggaagtacagcaccttttcg
ggcttcctgctgtaccaggactga
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