Nothobranchius furzeri (turquoise killifish): 107381691
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Entry
107381691 CDS
T05163
Name
(RefSeq) polycomb protein SCMH1-like isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107381691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107381691
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
107381691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
SAM_1
RBR
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
107381691
NCBI-ProteinID:
XP_015808982
UniProt:
A0A8C6KIL0
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Position
sgr07:40111310..40147020
Genome browser
AA seq
681 aa
AA seq
DB search
MIIMGRTPQRDQKDEKKGRRSSIPAGSALDKSNEPFSWEEYLRETSSTAASPSCFKQSRV
PPANDFKAGMKLEARDPRNSNSVCIATVMGMMGTRLRLRLDGSDNTNDFWRLVDSLDIQP
IGTCERNGDMLQPPLGFRMNASSWPMFLLRTLSGAEIAPAAAFKKEPPTPAKNYFHPGMK
LEAVDRKNPYLICPATVGEVRGQEIFVMFDGWRGAFDYWCPFDSRDIFPVGWCTLTKHSL
QPPGNFFTLPGALLAPVSSSSAAHRTSFNSSSSSMQTSYRLPHPLPPLPVRKGVRGRRPK
SQTIALLKAAAEAAAAAAVNGASQSPEPESLLAPRPHKKRGPKPKGKKPLVGPSPGASPV
ITPPPETRLSTSHVSVDTNLNNSSNVICTVCVYVNKHGNYGPHLDRKLVQQLPDHFGPAP
VNAVLQQAVQACVDCTYQPSVLLSFLQSQSHSGGEVIRVRSEHGIRYVKLPSASSASAVL
RFLENMCQHLESDILFSSQPFSPYSTNTRFYNRTKSEPSAVNENGMSNNNSSKDSIPNSS
PLHITLDYRAAKRERPYCPGHTQTAPPLQRVSSNPTELGPTSAHRRVEAASSTTGPDHIK
QDKESPGNSASSWSVDDVIRFVQEADPHTLGPHVDLFRKHEIDGKALMLLRSDVIMKYMG
LKLGPALKLCHHIEKLRQTKQ
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcatgggccgaacaccacagagagatcaaaaagacgagaagaaggggagacgg
agcagcatcccagcaggctctgccctcgacaaatctaatgaaccgttcagttgggaggaa
tatctgagagagacctcatccactgcagcttcacctagttgcttcaaacagtccagagtg
cctccagctaatgattttaaagcaggtatgaaacttgaagcacgtgatcctcgcaactcg
aactcagtgtgcatcgctacggtgatgggcatgatgggtactcgtctgcgcctgcgtctg
gatgggagtgacaacaccaatgatttctggcgacttgtggactctttggacatccaacca
attggaacctgtgaaaggaacggagacatgctgcagccgcctctaggtttcaggatgaat
gcatcctcgtggcccatgtttcttctgcggacgcttagcggtgcagaaatagcccccgct
gctgcttttaagaaggaaccacccactcctgctaaaaactacttccaccctggtatgaag
ctggaggctgtagaccggaagaacccctatctgatttgtcctgccacagtgggagaggtc
agaggtcaggagatcttcgtcatgtttgatggttggagaggtgcgtttgactattggtgc
ccctttgactccagagacatcttccctgtaggctggtgcaccctgaccaaacacagctta
cagccacccggaaacttctttacgctccctggtgcactcctcgccccggtttcttcctcc
tctgcggcacatcgcacctcctttaactcctcctcctcctccatgcagacttcataccga
ctgccccatcccttgccgcccctccctgttcgcaagggtgttcgaggtcgtcgtcccaag
tctcagacaatcgctttgttaaaagcagcagctgaggcagcggcagcagcagcagtcaat
ggagcatcacagagccctgaacccgagtctctgctggccccaagaccacacaagaagaga
gggcccaaacctaaaggcaagaagcctttggtagggccatccccaggggcatcaccagtt
ataactccacctccagagaccagattgagcacaagtcatgtctcagtggacaccaacctc
aacaacagttcaaatgtaatttgcacagtgtgtgtctatgttaacaagcacggtaactat
ggcccacatcttgatcgaaagctagtgcagcagctgccggaccactttggtccagctcca
gtcaacgcagtgcttcagcaggctgttcaggcctgcgtggactgtacttaccagccctct
gtgctgctgtcctttctgcagagccagtcccattcaggaggagaggtcatcagagtccga
tcagaacatggcattcgctacgtgaagctgccctctgcctccagtgcgtcggctgtgctg
cggtttttggagaacatgtgccaacacttggagagtgacattcttttcagctcacagcca
tttagcccttacagcaccaacacacgcttttacaacagaacaaaatcagaaccgtcagct
gtcaatgagaacggcatgtccaataacaattcctcaaaggattccattcccaattctagc
cctcttcacatcacactggactacagggctgcaaagagggagcggccatattgccctggg
cacacacaaacagcaccgccactccagcgcgttagctccaaccccactgagctcggccca
acgagcgctcacagacgagtggaggcagctagctccacaactggtccggatcatattaaa
caagacaaagagagtccagggaacagcgcctcttcctggtcggtcgatgatgtcattcgg
tttgtccaagaagccgatccccacacactgggccctcatgttgacctgttcaggaaacat
gagattgacggcaaggcgctgatgctgctgcgcagtgatgtcatcatgaagtacatggga
ctgaagctgggcccagctctcaaactgtgtcatcacatcgagaagctgaggcagaccaaa
cagtag
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