Nothobranchius furzeri (turquoise killifish): 107381714
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Entry
107381714 CDS
T05163
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107381714 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107381714 (dmxl2)
Membrane trafficking [BR:
nfu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107381714 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
107381714 (dmxl2)
RAVE complex
107381714 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_LRRK2
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_Vps41
TPR_GEMI5
NBCH_WD40
Beta-prop_SPT8
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
107381714
NCBI-ProteinID:
XP_015809027
UniProt:
A0A9D2Y333
LinkDB
All DBs
Position
sgr07:39301077..39345408
Genome browser
AA seq
3106 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDVVILASDFDCVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPLSTNPNKCHKLLNYQWQKTGQFFLDAITYTLAWDP
QGNRILAAAERLQLWAPPLADALIEEEDGQMIEERTHPVLNDWNCVWQCKTAASVHTAKW
SPDGEYFATVGTDDCLLKVWYPTTAWRSAVVVQDSSEKKPAPVHFSFVYLAHPRSVTGMS
WRKTSKFMPKGSVCNVLLTSCEDGVCRLWSETLLPEDSLLGGQITENTQSFSTSLPGLAG
NKDKIQHALESIHHLKQLRRGRRRSSALVAHSDLLLPSQHGTQDAHTHRHIVQHANALCH
FHISASINPNTDIPSTLADSTVFNPEDGTGGGGFVVHWLNNKDLSFTSSMDLFMTQLRRY
TEQQLEQTTEDPLDPEGSPMKFDFDLDEMSDKASSEHGEEVDSGEQGSTKASSPGSSSSM
PLPSMLLERKLETLTTEWNKSPDMLFTIHPADGSFLVWHVKYLDEFNQGIFRQVQVSFSS
RIPVAFPASDANSLSKNILMYACTLTEGESAGTGEQGRMIQRVARSASISAGLGPAGASP
SPKLRPGISPAVMMVSKHVDGSLNQWAVTFAERSGFSNVLTVSHKTRYCGHRFHLNDQAC
HTVLPLLLTSSHHNALLTPPSAPSSLEGEQPPSFPLPKGLPRKQLRNAATRTFHDPNAIY
SELILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSASACF
VASDGRNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQ
CGANTQLLHVFQEDFILGYKPQKESEAYTPAFSTGEDYQPATFSEKFFLVVMEKDLNGNS
DLQMWHLHLQSVQACVDEPSQHFSFQSQLMVPNQVVNADSSPETSPVRPLPRSASTANLQ
SASKLILSSKLVYSKRLDLPHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSFVR
FWRCAVDGDDGYDGYDQENRAYRWEPWVLMNEEEDNNSSVCVTGRPVAVSCSYIGRLAVA
FKQPRHGQLQGSTEDFLMRVSIYECESTGGSEWVLEQTVHLDDFARPASTLDPRVSVDSN
LFVYSRTDLYMSRDHSSPNIKHFVHLDWLSKEDGSHILTIGVGSNILMYGRISGVVNEQT
SSKEGVAVITLPLGGSIKQGIRSRWILLRSIDLLSSVDGTPSLPVSLSWVRDGILVVGMD
CEMHVYAQWHQDKKPGDGEEDRLSSADIAGGQTAGSSSVSEGRARSKSVFEGSAGVDEAL
RAPAGLQEGGLFEAAHCLSPTLPQYHPTQLLELMDLGRVRRAKAILAHLVKCIAGEVAVV
RDVEAGEGGSRRHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYALMLADLDA
PFKKKLEETVRVNKVFDGDATQKNSEDQYADLFQMPAVTTDDFVNFANDKPEKKSRVINL
SQYGPTYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTIATTSAEVTGSSDQQYKG
GEALDECGLRYLLAMRLHTCLLNSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIP
AMQRGDPQWSELRAIGVGWWIRNINTLRKMVEKLGKAAFQRHSDPLDAALFYLAMKKKAV
LWGLFRSQHDEKMTQFFKNNFSEDRWRKAALKNAFSLLGKQRFEQAAAFFLLAGSLKDAI
EVLIEKMEDLQLAMIVARLYEADFENSSTCQGLLYEKVLGCNRDGSDYNCSRVHPDPFLR
SIAYWIMKDYTQALDTLLERNPKEDENLDLMVKSCNPVVFSFYNYLRTHPLIIRRHFANP
EGPAAGVGLTAEKSGADEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVSKKCGSS
PLSKASSKANVNSSQPLENGTRGGVDWGSAAAKTHSWGGNDGGGALDWSQPAVKLEEDEL
KLDWGDDKGDEEDDDEEGDGEGLTMKKPDPETKVDSDSKHQKDDSQGESEVDVIAEQLKF
RACLKILMTELRTLATGFEVDGGKLRFQLYSWLEKEIAAMHKICNYKVEGKEEGSEVERA
RTASLDISDDAFECSEAGAYERHQMERRRLQAKQQHSERRKAWLRRNQALLRVFLSYCSL
HGAKGGGVTSVRMELLFLLQESQQETTVKQLQSPLPLPTTLPLLSACIATTKTVIANPVL
HLSNHIHDILYSITVMEAPPHPDIIDDRVNALHTLAASLSACVYQALCDSHSYSSQTEAN
QFTGMVYQGLLLSERKRLRTESIEEHATPNSAPAQWPGVSSLISLLTSAREEDQPKLNVL
LCEAVVAVYLSLLIHGLGTHNGNELFRLAAHPLNNRMWAAVFGGGAKVIIKPKRPELPPA
TPPQAPAEDSDRYRRRFNMRMLVTGRQVKETPATPPPVPTERPTYREKFIPPELSMWDYF
VAKPFLPLSESNALYDSDESGAEDDEDDDDAFLSDTQMTEHSDPNSYSWALIRLVMVKLA
HHNVKNFIPLTGLEFTDLPVSSALCNAVLKTLETWEQLLLERMNKFDGPPPNYINTYPTD
LSAGAGPAILRHKAMLEPDNTPFKTKNHQSFPVRRLWHFLVKQEILQETMIRYIFTKKRK
QSESLENHVDRINPNCIAGASSPYKVVSFTVPAQALALSVFLFQRFASKPSLKEKMHVLL
KKVVVCRLDSQVEADLGYPGGKAKIIHKESDIIMAFTINKANSNEIVLASTHDVQEVDVS
TLVAVQPYTWIGDDFDKESRSSDDVDHRSSHTNIAQASTVSFAPPPMPVSATMPWLGSGQ
TSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQAGNARVT
RLYFNSQGNKCGVADGEGFLSLWQVNQTSSSPKPYLSWQCHSKTCGDFAFITSSSLIATA
GQSNDNRNVCLWDTLISPSNTMVHAFPCHENGATVLQYAQKQQLLITGGRKGFVCVFDIR
QRQLLHTFQAHDSAIKALALDAYEDFFVTGSAEGNMKVWKLAGHGLMHSFSNEHAKQSIF
RNIGAGVMQVETRPGNRFFTCGADGTLKMRVLPDRYNIPSSLVDIL
NT seq
9321 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgcaccaggtgctgacgggagctgtgaaccccggagattgctgctactcggtc
ggaagtgtgaatgacatcccattcacggcctatggttcaggttgtgatgtggtgatcttg
gctagtgactttgactgtgttcagatcatcccaggagctcagaatggaaacatacaggtg
ggctgcgtggagtgttcccaccagcttggcaggatcgctgcttcttacggaaacacggtc
tgcatctttgaaccgctttccaccaatccaaataagtgccacaagctacttaattatcag
tggcaaaagacaggacagttctttcttgatgccatcacctacaccctggcctgggaccca
caagggaatcgtatcctagcagcagctgagcgactccagctgtgggctcctccactggcg
gatgctctaatagaggaggaggatgggcagatgattgaggagagaacgcatcctgtccta
aatgactggaactgtgtctggcagtgcaagactgctgcatctgttcacactgccaagtgg
tctcctgatggggagtactttgcaacagttgggacggatgattgtttactaaaggtgtgg
tatcccaccactgcctggcgctctgcagtagtggtccaggattcatctgaaaaaaagcct
gctcctgttcacttctcctttgtttatttggcccaccctcgctcagtgactggcatgtcc
tggaggaagacgagcaagttcatgcccaagggttccgtgtgcaacgtgttgcttacttcc
tgtgaggatggcgtctgtaggctatggtcagaaaccctcttaccagaagacagcctgctt
ggtgggcagatcactgagaacacacagtcctttagcactagcctgccaggcctggcggga
aataaggacaagatccagcatgctttggagtcaatccatcacctgaaacaactacgtcga
ggccggcggaggtcgtctgctctggtggcacacagtgacctgctgctgccctctcagcat
ggcacacaggacgctcacactcatcgtcacatcgtccagcatgccaacgccctgtgtcac
ttccatatctcagccagtattaatcccaacacagatatcccgtcaacactagctgactct
acagtattcaaccccgaagatggaactggtggtggaggctttgtggttcactggctcaac
aataaggacctcagtttcacctcctctatggacctttttatgacgcagctccgcagatac
actgaacagcagctggaacaaacgaccgaagaccctctagatcctgaaggatctcctatg
aagtttgactttgatctggatgagatgtctgacaaagcatcatcagaacacggagaagaa
gttgattctggggagcaagggagtaccaaggcctcctccccggggtccagctccagcatg
cctttgccctccatgctgctagagaggaagctggagactctgaccacagagtggaacaag
agccccgacatgctgttcactatacaccccgctgatgggtccttcctggtttggcatgtg
aagtacttggatgaattcaaccaggggatattcagacaggttcaggtgtccttctcctcc
cgcattccggtagcgtttcctgcaagtgatgctaactctctcagtaaaaacatcctcatg
tacgcctgcactttgactgagggtgagagcgccgggacaggcgagcaaggacgaatgatc
cagcgtgttgcccgctctgcttcgatctcagctggcctgggtccagctggtgcatcccca
tcaccgaaacttcgccccggcataagtcctgctgtcatgatggtctccaagcatgtagac
ggctctctgaaccagtgggccgtgacatttgctgagcgctctggcttctccaatgttctg
acagtatcgcacaagacccgatactgtggccaccgcttccatctgaatgaccaagcctgc
cacaccgtgcttccgctgctgctcacttcctctcaccacaacgcgctgctcacccctccc
tctgccccgagcagtctggaaggggagcagcctccatcctttcctctaccaaaaggtctt
cccaggaagcagcttcgtaatgcagccacaaggactttccacgaccccaatgccatttac
agcgagctgatattgtggcgagtcgaccacatcggacctttgtcctgcactggaggggtc
tctgaactggcccgcatcaactctctgcacacctctgccttcagtaatgttgcatggctg
cctacgctggtacccagctctgttctcggaacttactgcaacagtgccagcgcctgcttc
gtggcttcagatggtagaaacctgcgtctctatcaggctgttgtggatgccagaaaactg
ctggatgagctgtcagatcctgaaacatctaaactggtgggagaagtgttcaacatcgtc
agccagcagtccaccgccagaccaggatgtatcatagagttagacgtcattacaaaccag
tgtggcgccaacactcagctgctacatgtcttccaagaggatttcattctaggttacaaa
cctcagaaagaatctgaggcatacacaccggccttttcaactggagaagattaccagcct
gccacattttctgagaagttcttcctggtggtgatggaaaaggatctgaacgggaactcg
gacttgcagatgtggcacttgcacctccagtctgtgcaggcctgcgttgatgagccgagt
cagcattttagcttccagagccagctgatggttcctaatcaggttgtgaatgctgactct
tccccggagacgtcacctgtcagacccctgccgcggtcagcttctacagccaacctgcag
tcagctagcaaactcatcctcagctccaagctggtctacagcaagaggctcgatctgccc
catggggtggaggttacgagggcgacgccttctgcaggtcatctgagttcctcctctatc
taccccgtgtgcctggctccgtatctgatcgttaccacctgctccgattcttttgtgcgg
ttctggcgctgtgctgtggacggcgatgacggctatgacggttatgaccaggaaaaccga
gcgtaccgctgggagccctgggtgctgatgaatgaggaggaggacaacaacagttctgtg
tgtgtgacaggacgacccgtagctgtgtcctgctcctacatcggcagactggctgtagct
tttaaacagcctcgacacggacagctgcagggttccacggaggacttcttaatgcgcgtg
tccatctacgagtgtgagtctactggaggctctgagtgggttttagaacaaacggtccac
cttgatgattttgccagacccgcatcaactctggatccaagagtcagcgtggattccaac
ctgtttgtctacagcaggactgacctgtacatgagcagagaccacagctcacccaacatc
aagcactttgtccatctggactggctgtcgaaggaggacgggtctcacatcctcaccatc
ggagttggctccaacatcctgatgtacggtcgcatatctggtgtggtcaatgagcagact
agcagtaaggagggcgtggctgtcatcacccttcctctagggggcagcatcaaacagggg
attcgttcacgctggattctgcttcgctccattgaccttctctcatctgtggatggtact
ccgtcactgccagtctccctgtcctgggtgagggacggcatcctggtggtgggcatggac
tgtgaaatgcacgtgtatgcccagtggcaccaggacaagaagcccggcgatggagaagag
gacaggctgtcatctgcagatattgctggaggtcaaacagcaggttcctcttctgtcagt
gaagggagagccaggtctaagagtgtgtttgaagggagcgctggagtggatgaagccctc
agggccccagcaggactacaggagggtggactgtttgaagctgctcactgcctatcccca
actctaccacagtaccatccaacccagctgctggaactcatggacctgggcagggttcgc
cgtgccaaagctatccttgcacacctggtgaagtgtatcgctggagaagttgctgtggtg
agggatgtagaggcgggcgaaggcggatccaggcggcatctttctcgaaccatcagcgtg
accggcagcacggccaaagacaccatcgtggctggtcgtgacggaggccgggactacacg
gagatcaactccatccctcctttgcctctctatgctctcatgctggctgacctggatgca
cctttcaagaagaaactggaagaaacagtcagagtgaacaaggtgttcgacggtgacgca
actcagaagaactcagaggaccagtatgctgacctcttccagatgccagcagtcacaacc
gatgactttgtgaactttgctaatgataaaccagagaagaaatcacgagtcattaacctt
tctcaatatggacccacttattttggaccagagcatgctcaggtgttgtccagtcacctc
atgcactccagcctccccggactcacaaggctggagcagatgttcctggtggccttggct
gataccattgcaaccaccagcgctgaggtcaccggctcttctgatcaacagtacaaaggt
ggtgaggctcttgatgagtgtggactgaggtacctgctcgccatgcggcttcatacctgc
ctgctcaactctctgcctcctctttatcgcatgcagctgcttcaccagggcctgtccacc
tgccactttgcctgggccttccattctgaggcagaagaggagctgctgaacatgattcct
gccatgcagagaggcgacccgcagtggtcggagctccgagctattggagtgggatggtgg
ataaggaacatcaacactctgcggaaaatggtggagaagctgggtaaagctgcgttccag
aggcacagtgatcctttagacgctgctctgttctacttggccatgaagaagaaagctgtc
ctgtggggactcttcagatctcagcatgatgagaagatgacacagttcttcaaaaacaac
ttcagtgaggaccgctggcgaaaggcagcccttaaaaatgccttctccctgctgggaaag
cagcgctttgagcaggctgctgctttcttcctattggctggctcccttaaagatgccata
gaggtgttgatcgaaaaaatggaggatctccagttggccatgatagtagcaagactgtat
gaagctgactttgagaactcctcaacgtgtcagggcctcctttacgagaaggttttgggc
tgcaacagggatgggagtgattacaactgttccagggtgcatcctgaccccttccttcgc
agcatagcctactggatcatgaaagactacactcaagcccttgatacgctgttagagaga
aaccctaaggaagatgagaacctggatttaatggtgaagtcttgcaaccctgtggtgttt
agtttctataactacttaagaacacaccctctgatcatccgtcgccactttgctaatcca
gagggcccagcagcaggcgtgggcctcactgcagagaaaagtggtgcagatgaaataaac
cttattgagcgcaaactgttcttcactactgccaacgcacacttcaaggtgggttgcccg
gttttggctctggaagtgctttccaagattcccaaagttagcaaaaagtgtggctcctcg
cctctcagcaaagcctcatcaaaggccaacgtgaactcgagccagcctttagagaacggt
acacggggaggggtggactggggctccgcagcggcaaaaacacacagctggggtggaaac
gatggtggcggtgcgctggactggagccagcctgcagtcaagctggaggaagatgagctg
aagcttgattggggagatgacaagggtgatgaggaagatgacgatgaggaaggggatggg
gagggtttgaccatgaagaaaccagatcctgaaaccaaggtcgacagtgactccaaacat
caaaaagacgactcacagggtgagtccgaggtagacgtgatagcggagcagctgaagttc
cgtgcctgcttgaagatcctgatgacagagttgcgtacgctggccaccggctttgaggtg
gatggagggaagctacgctttcaactctacagctggctggagaaggagatagcagccatg
cataagatctgtaactacaaggtggaggggaaggaggagggatcagaagtggagcgagct
cgaacggcttctttggacatatctgatgatgcgtttgagtgttcggaggccggggcttac
gagcgtcaccagatggagcgtcgtcgtctgcaagccaaacagcagcactcggagcgacgg
aaggcgtggctgaggagaaatcaggctctgctgagggttttcctgtcctactgcagcctt
catggagccaaaggtgggggggtaacctctgtccgcatggagcttctgttccttctgcaa
gagagccaacaggagaccacggtgaaacagctgcagtctcctctgccgctgcccaccaca
ctgcctctgctctcagcctgcatcgccaccaccaagaccgtcatcgccaaccctgttctc
cacctcagcaaccacattcacgacatcctgtactctatcactgtgatggaagccccgcca
catcctgacatcatcgatgatcgggtaaatgccctgcacacgttggcagcatctctgtct
gcttgcgtctatcaagcattgtgcgacagccacagttacagcagtcagactgaggccaac
cagttcacggggatggtttaccaggggctgctgcttagtgaaaggaagcgactgcgcaca
gaaagcatcgaagaacatgcaacaccaaactctgctcctgcacagtggccaggtgtgtcg
tctctgatttctctgttgacatctgcaagggaggaggaccagccaaagctcaacgtgctg
ctgtgcgaagcggtcgtggccgtttatctttcgctgctcatccatgggctgggcactcac
aacggcaatgaactcttccgcctggcagcacatcctctcaataatcgcatgtgggccgct
gtctttgggggaggagctaaagtcatcattaagccaaagagaccggagctcccaccagcg
actccccctcaggcccctgcagaagactcggaccgatacagacgtagattcaatatgagg
atgctggttacagggcgccaagtgaaggagacacctgccactccccctccagttcccaca
gagagaccaacctatagggagaagttcatcccccccgagctgagcatgtgggactacttt
gtagctaaacccttcctgccgctgtccgagagcaatgctttgtatgattcagacgaaagc
ggtgctgaagatgacgaagatgacgatgacgccttcctttctgacacacagatgacagag
cactctgatcccaactcctacagctgggctctgatccgcttggtcatggtgaaactggct
catcacaatgtcaagaacttcatccctctcactggccttgagttcacagatctgcccgtc
agttctgctctctgcaacgctgtgttaaagaccttagagacctgggagcagcttctgttg
gagagaatgaacaagtttgatggtccacctccaaactacatcaacacttatccaactgat
ctgagtgctggagccggccccgccatactgcgacacaaggccatgctggagccggacaac
acgccatttaagaccaagaaccaccagtccttcccagttcgacgtctgtggcacttcctg
gtcaaacaggaaattcttcaggaaaccatgattcgttacatcttcaccaagaaaagaaag
cagagtgagtctttagagaaccatgtggaccgtataaacccaaactgcatagctggagct
agcagtccctataaggtagtatcatttaccgttccagcccaggccctggctctgtctgtt
tttctgtttcagagattcgcttccaaaccaagcttgaaggagaaaatgcatgtcttgtta
aaaaaagtagtagtctgcaggttagattcgcaggtagaggcagatcttggctacccagga
ggaaaagctaagatcatccacaaggagtctgatataattatggcttttaccatcaataag
gctaactccaatgaaatcgtgttggcctccacccatgatgtccaggaggtggatgtctcc
accctagtggctgtccagccatacacctggataggggacgactttgataaggagtctaga
agctctgatgacgtagatcatcgctcgtctcacacaaacatcgcccaggcgagcaccgtc
tcttttgctccaccgccgatgccggtctctgcgaccatgccgtggctcggtagcggtcag
accagcatgggggccagtgtgatcatgaagaggaatctgaataatgtaaagagaatgacg
tctcatcctatatatcagtattacatgacgggggctcaggacggcagtgtgagaatgttt
gaatggaacagacctcagcagctcatctgcttcagacaagcaggcaacgctcgagtcact
cggctctattttaattctcaaggcaataagtgtggagttgctgatggagagggtttcctc
agtctctggcaggtcaaccaaacctcctccagccccaaaccttacctgagctggcagtgt
cactctaagacctgtggtgatttcgccttcatcacgtcctccagcctgatcgcaacagct
ggacagtccaacgacaacagaaacgtttgcctgtgggacactctgatttctcctagcaat
accatggtccacgcattcccctgccatgagaacggggccactgtactgcagtatgctcag
aaacagcagctgctcatcaccgggggcagaaaaggttttgtgtgtgtgtttgacattcgc
cagaggcagctgctgcacactttccaggcccatgactcagccatcaaggccctggcgctg
gatgcctacgaggacttcttcgtcaccggctctgcagagggcaacatgaaggtgtggaag
ttggctggccatgggcttatgcactcttttagcaacgaacacgccaagcagtccatcttc
cgcaacattggcgcaggcgtcatgcaggtggagacgcgtccaggaaaccgattcttcacc
tgcggagcagacggcaccctcaagatgagggtcctgcctgaccgctacaatattcccagc
agcttagtcgacatcctgtga
DBGET
integrated database retrieval system
