Nothobranchius furzeri (turquoise killifish): 107381832
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Entry
107381832 CDS
T05163
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107381832
Membrane trafficking [BR:
nfu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107381832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
107381832
NCBI-ProteinID:
XP_015809214
UniProt:
A0A8C6KU08
LinkDB
All DBs
Position
sgr07:complement(28352502..28446771)
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AA seq
2009 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKTAKPKAPITDVTVVIRSLGEEVP
PGFTCIETTPSGQSADLNNGGLMAPQIFLCYRRGRDKPPLTDLGVLFEWKERLKQGCYLI
QTTPSGRPANISGNSSQRIYITYRRAPESQPHASLAVTDICIIIPSKGETSPHTFCRVEK
NLNSSIWGSSVYLCYKKSVAKTNVMAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGAAI
ECWPANTKYSLPVFSTFVFTGASGEKVYGAAIQFYEPYPLECLTDQQLSQLGLLSPEHKL
SPITSMTDDTNSSNTHSVYTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHALPIEKHI
SHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLQNLGPENAVTLL
VFAVTEHKILVHSLRPAVLTSVAEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVG
VDSRYFDLYDPPPDVSCVDLDTNSIFHNDDKRALTWKILPKKACKNLMNVLSNLHRQLVD
GQYRSDELLELSMSDSQELSCGRSLHTVELEIQEAFLRFMAAILKGYRSFLRPITQAPSE
KATDASSLFDLQGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDTSLAFFDDCVD
KLYNSERSAEKGSKVDGDKTEEARLIEIDESQRSEHTVFITPPELPPLPDGEEHPLCYRY
DGFPVLSLDLFDPVEGLRTPSSRLAARHSCPTSPAPMFRRTKQEIKSAQKIAKKYSSIPQ
MWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQTKKLQPPDEVCYRVLMQ
LCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWMKLRNVI
LGVAQFKQALRRHGHFTQGPLSDGSDLDAVSHSSMDSSADTNVAEQGPFTSDPVKVDPTD
DRSSTVGHGGGSVGARPGAAHSCWVGSELREATLFPGDQSDLGYNSMSKEEVRRGEPTSQ
DSAPDRDEKKESDCSSLSETESAKGSKDCLPQLDLEISSSFKPRGIVRSSYPYEDSSCKP
KTSASSGHIAGLLFTSSLEEIGEVHTHSLLRKHKSVLEEVVGSTGSGSALDWQGVKARRL
SGDTVGSSGSSTTVLSLGMGQAETDPGKIAGHLGADAKIFSSANYCNSKRFHSQVVAKVG
NSRGCEEEEEGQDSSDEDRSQTETIFDFEDLEIDKPATGVNSHIRLHKKAVERSSSYGAV
STVIAKGTVKRTGIQTGFDPLSLLAAETRRQDMDGFAADDVSTPSSGRNLAREIELYMNH
LDTPLSSRTPSSDLQDPSSPLLLYPSSNSALRRSSLPHSSPLKMAGVPRSCTFHQTSPSQ
PISRQRLRSSTSCQSSSTSPSLSPRPSPFRERVDRASLASPSPSSSSFAMDTLLTPTLDV
FKTSMFSAGKGVAEKASRWYSRLATYTTPTKDSHGDRLSVSSLGAGDPDCSSLLDEDDCS
ELECSVISPQKNGLSGLRGHHRSPRQSPVHSRVESPTASCSFRRPSSLLAGPTLSLSRFQ
LPDKSDLGSSRYTSNTSIFSNYAMELLISSCSRCKTCDCLVYDEEIMAGWTADDSNLNTT
CPFCGNPFLPFLNVEIRDMRGPGRLFLKGSPSVEDTMTSSYSASTGLDTRMSTLSTPCPT
TAVFPPSPAVEECSGRTRQIRPQGIDIPTDRRGALSSGGAMTRSVSAFGPLEDTCQFNCC
LPMSGSLPSRLNETTDPLSMEWRLHNPEPVTVPYLSPLVLWKELESLLENEGDPVISEAN
MVDHHPIIYWNLVWYFRRLDLPSNLPGLILSSEHCNRDSQVPRHWMSEDSKHVLIQILWD
NLKLHQDPVQPLYILWNTHRLNCALLLENVGYPVSRLIPEEEKPFSEDLLQSVVKNIQRN
DVSRPMAQLLQLLDRALGVKRQRSLYRDILFLSLVALGKDNIDIDAFDREYKLAYDRLTP
PLVKLTHNCDRPPSTGVMECRRTFGEPYL
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggcccacgtgtagccgactactttgtggtggccggtctgacggac
ccgtccaagccattggaccaggagatccactttgatgacgtgtgccacaagacggccaag
ccgaaagcacccatcaccgatgtgacggtggttatccgctcactgggagaggaggtgcct
ccggggtttacatgcatcgagaccacaccaagtggccaatcagccgatctgaacaatggt
ggccttatggcaccacagatattcctgtgctacaggcgaggccgtgacaaaccaccactc
actgacttgggtgtgctgtttgaatggaaggagcgactaaagcagggatgctacctcatc
cagaccaccccgtctggtcgtccagccaacatcagcggtaattcctcccagcggatctat
atcacctaccgccgagcgcccgagagccaaccccacgcctccctggccgtcaccgacatc
tgcatcatcatccccagcaaaggcgagacgtcccctcacaccttctgtagggtggagaag
aacctcaacagcagcatatggggttcctccgtttacctgtgctacaagaagtctgtggct
aaaaccaatgtaatggcctataaagcagggttattcagcagatacccagaggaagactac
gaatcatttcctcttccagagtctgtccctctcttctgccttcccatgggggccgcgatc
gagtgctggccagcaaacaccaaatactccctgcctgttttttccacctttgtcttcact
ggggcctctggggagaaggtttatggtgctgccatccagttctatgagccatacccactg
gagtgcctgaccgatcaacagctctcccaactgggtctcctcagtccagaacacaaactg
tctcccatcacctccatgaccgatgacaccaacagctccaacacacattcggtctacacc
aacaagtgtatctgtctgctctctcactggcccttctttgatgctttccgcaagttcctc
acattcctctatcgctactccatctcaggcccccatgccctgcccatcgagaagcacatc
tcccactttatgcacaaagtccccttcccttcctcccagagacctcgcatattggtgcag
ctttcaccacatgacagcctgatgttgagccagccagtgagttctcctttacccctcagt
ggcggaagattttctactctgctccagaacctcggacccgaaaatgccgtcaccttactc
gtgtttgctgtcacagaacataagatcctggtccactcgttacgtccagcggtgctgacc
agcgttgctgaggccttggtgtcgatgatcttcccattccactggccatgtccgtacatc
cctctttgccccctggcattagctgatgtgctgagcgctccctgtccttttattgttggc
gtggactcgcgatactttgacctttatgaccctccaccggatgtgagctgtgtagatctg
gacacaaactccatctttcacaatgacgataagcgagctctcacatggaagatcctgcca
aagaaagcctgtaaaaacctgatgaatgtactgagtaatctccaccggcagctggttgat
ggtcagtatcggtccgatgagcttctggagctgagcatgagcgattcacaagagctgagc
tgtgggaggagcctccacactgtggagctggagatccaggaagccttcctgcgcttcatg
gcagctattttaaagggctaccgctcctttctgaggcccatcactcaagcaccttcggag
aaagccacagacgctagctcactgtttgacttgcaaggattcctaaagagccgagatcgc
tcacaccagaagttttacactctaatgaccaagacccaaatgttcatccgcttcattgag
gaatgctcttttgttagtgacaaagacaccagcctggctttctttgatgactgtgtggac
aagctttataattcagagcgaagtgcagagaaaggaagcaaggtggacggagacaagaca
gaggaggccaggctgatagagattgatgaatcccagcgcagtgagcacacagtcttcatc
actcctccagaactgcctcctctgcctgatggggaggagcatccgctgtgctacaggtat
gatggcttccccgtgttgagtcttgacctgtttgaccctgtggagggtctgcgaacacca
tcctctcgccttgctgccaggcacagctgccccaccagcccagcccccatgtttagacgc
accaaacaggaaataaaatcagcccagaagattgccaagaagtactcatccatccctcag
atgtggtccaagtgtttgctccgtcactgttatggcttgtggttcatctgtctgccggcc
tacgtcaaggtgtgccactccaaggtgcgggcgcttcgcaccgcctacgacgtcctcagg
aagatgcagactaagaagttgcagccccccgatgaggtgtgctaccgggttctgatgcag
ctgtgtgggcagtatggccagcccgtcctggctgtcagggttctgtttgagatgaagaag
gccggtgttcatcccaatgctatcacctatggctactacaacaaggcagttttggagagc
acgtggccttccagcactagaggaggatacttcctgtggatgaagctgagaaatgtcatt
ctgggagtggcacagttcaaacaggctctacgacgacatgggcacttcacccagggcccc
ctttcagatggcagtgacttggacgctgtgagtcacagcagcatggatagttctgctgac
actaacgtggccgagcaaggccccttcacctctgaccccgtcaaagtagaccccactgat
gatagatctagcacagtcggccacggtggcggcagcgtgggtgcccggcccggggcagcc
cactcatgctgggtgggctctgagctcagagaagccactctcttcccaggagatcagtcg
gatttgggttacaactccatgtccaaagaggaagttaggaggggagagcccacctcccag
gactcggcccccgacagagatgagaagaaagagagcgactgcagctccctgtcagagaca
gagagtgcaaaaggaagtaaggactgccttcctcagctggacctggagatcagttcctcc
ttcaaacctcgagggattgttcgcagcagttacccctatgaggactcttcctgtaaacct
aagacctccgccagctcaggccacattgcagggctgctcttcacctcctctctggaggag
atcggggaggttcacacgcacagtttgctcaggaaacacaagagtgttctggaggaggtg
gtgggaagcaccggtagtggctccgctttagattggcagggcgtgaaagcccgcaggttg
agcggggacacagtgggcagcagcggcagcagcaccactgtcctcagcctcggtatgggc
caggctgaaaccgatccagggaagatcgcaggacacttgggcgctgatgccaaaatattt
tctagtgctaattactgcaacagtaagaggttccattcgcaggttgttgctaaagtgggg
aattccagaggttgtgaggaggaagaggaggggcaggactccagtgatgaagacaggagt
caaactgaaaccatctttgattttgaggacttggaaatagacaagcctgccacaggggtc
aactctcacatcagacttcacaagaaagctgttgaacgcagctccagctatggagccgtg
agcactgtgatagccaaaggaacagtcaaacgcaccgggatccaaactgggtttgacccc
ttgtcccttctggctgcagagaccagacggcaggacatggatgggtttgctgcggacgat
gtcagcactccgagctccggcaggaacttggccagagaaatcgagctctacatgaaccac
ttggacacaccgctaagcagccgcacacccagctcagatctgcaggatccgagcagcccc
ctcctcctctacccctcctccaactctgccctccgcaggtccagcctgccccatagctcc
cccctgaagatggcaggagtaccacgctcatgcacattccaccaaacttcaccctctcag
cccatctcccgccagcgcctgaggtcgtcaacttcctgtcagagctccagcaccagtccc
agcctcagccctcgacccagtcccttcagggagcgggtcgatagagccagcctggcgtca
ccttcaccatcctcctcctcctttgctatggacactctgctcacaccaactctagatgtg
ttcaaaaccagcatgttctctgctgggaagggcgtggctgagaaggcaagccgctggtat
tcacgcctggccacgtacaccacgcccaccaaggacagtcacggtgaccgtctcagtgtg
tcctcccttggtgctggagacccagactgctcctccctattggatgaagatgactgttca
gagttggagtgctcagtgatttctccacagaaaaatggcctgtctggcctccgggggcac
cacaggagtcccagacagagccccgttcacagcagggtggagagtcccacagcgagctgc
agcttcaggaggccctcctctcttctcgctgggcctaccctctctctttccaggttccag
ctgccagacaaatcagacctcggctcttctcgctacaccagcaacaccagcatctttagc
aactacgccatggagctgctgatctccagctgttctcggtgtaaaacatgtgactgtttg
gtgtatgatgaggagatcatggctggctggacagctgacgactccaacctgaacaccacc
tgccccttctgtggaaatccttttctgcccttcctgaacgtggagatccgggacatgcga
ggacctggaaggcttttcctgaagggcagcccgtctgtggaggacaccatgacatcatcg
tactctgcctctactggtttggacacaaggatgtctactttgtcaacgccatgtcccacc
acagccgtattccctccatcccctgcagtggaggagtgctcagggagaactcggcaaatt
agacctcaaggtatcgacatccccacagaccggagaggagcgctgtcatctggaggagcc
atgacccgtagcgtcagtgccttcggtcctctggaggatacgtgtcagttcaactgctgc
ctgccgatgtctggcagcctgccgagtcgtctgaatgaaaccacggaccctctgagcatg
gaatggcggctccacaaccctgagccagtgacagttccttacctgagcccgctggtgctg
tggaaggagctggagagtctgctggagaacgagggcgacccggtgatcagtgaggcaaac
atggtggaccatcatcccatcatctactggaacctggtctggtacttcagacgattggac
ctgcccagcaacctgccgggtctcatcctctcatcagagcactgcaacagagactctcag
gtcccacgccactggatgtctgaggacagcaaacacgtgctgatccagatcctgtgggac
aacctgaagctgcaccaggaccccgttcagcccctgtacatcctctggaacacacacaga
cttaattgtgctctgttgttagaaaacgtgggttaccccgtgtcccggcttatcccagag
gaggagaagccattcagcgaggatctgctgcagagcgtggtgaagaacatccagaggaac
gacgtcagccggccaatggctcagctgctgcagctcctcgacagagcactcggggtcaag
aggcaaaggagtttgtaccgggacatcctcttcctctccctggtggctctgggaaaagat
aacatcgacattgacgcctttgatcgtgagtacaagctggcatacgaccgcctgacgccg
cccctggtgaagctgacccataactgtgatcgtcctccgagcacgggcgtcatggagtgt
cgccggacgtttggagagccttacctgtaa
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