Nothobranchius furzeri (turquoise killifish): 107382087
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Entry
107382087 CDS
T05163
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107382087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107382087
03036 Chromosome and associated proteins [BR:
nfu03036
]
107382087
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107382087
Coactivators
SAGA/TFTC/STAGA complex
107382087
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107382087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
107382087
NCBI-ProteinID:
XP_015809560
LinkDB
All DBs
Position
sgr07:complement(62227485..62380004)
Genome browser
AA seq
1074 aa
AA seq
DB search
MAGDSDPLEDMLFSEVDEKAVSDLVGSLESQLSGQSSSAGKADGNGGAGSADPANHHLGK
PPPAPLSTTTLEQQQGQLNKPEMRQEMNSKDASPDKTVTAPSPASATVFGEAPTTSVNVA
SSGSQSHGASVTAVTASGGSTLASPPHDSISTASSRSPKAAPSTGETSVEKNTPRKRTAA
PRRSASARLKSLNGAAITTRRNSNTAVGENVSSPDTTPSNSTRPVTSSINTSTFTLSNAS
LPVGQAAIALDRGTPTIALHRLPSHIVASIAQNGNGTTVSALAQQGARPGATISSASQEE
HSKSTTDTGASNADDCQSKIVMSSQSGSVSSVINSVSSASSAAVTPATTSTAAPTTTTTT
TTTTVSPPLIPASTPATCVAGLATTSACGPSQTISVTTTISMVRPTAPSPTAVAATSAQT
QPRPGLAVPQRIVAPQLIVRPSQQQATIQLPPGFTIPAERGAMRTEVGQLVMVPQQAFAQ
GQAPAQAQNNISLRPAGPTSGVAFRVTTPQQSPATSQTTRQCSLTPAKMAPAPSPTSSSP
ALQTSSSSSSLSSSSCPVLRPKGPVAPAVAVAAPQQTPMVIAPQAPTQSTPQPVQPAPTC
VTAPPGASVISQEMQENVKKCKNFLATLIKLASHNSPFPETSKNVKALVQDLLDAKIEPE
EFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPLQQGVKPAAGGTPPAAI
VAGPAVRIRHPNSVSTTGALPAGTLGHTAAMGVKTGGTVGGQVRMPMVITQSIRPQGTVG
KGAIIQAGRSPMGLPVQISANQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARILA
TNSELVGTQIRSCKDEAFLHPGLLHRRILETAKKFGVTEVSTEAVTFISHATQSRLRTLV
EKVSIIAQHRLDSCKDDECYEQSGDVRSQLRFFEQLERMEKQRKDEQEREILLKAAKSRS
RQEDPEQARLKQKAKEWQLQEQAEIRQRDANLTALAAIGPRKKRKLDSPGTTPTGAEVPS
SAAGSPAGSSSLTSSSRQYARQRITRVNLRDLIFYMEQERETAHSLLLYRALLK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgactcagaccccctggaagatatgctcttttcagaggtggatgaaaaagct
gtcagcgacctcgtgggctcgttagagtcacagcttagtggacaaagcagctcagcaggt
aaagctgacggtaacggaggcgctggctctgcggacccggctaaccatcacttaggaaaa
ccgccaccagctccactgagcacaacaacactagaacaacaacaaggacagcttaataaa
cctgagatgcgccaggaaatgaactccaaagacgctagtccggataaaactgtcacagct
ccttcaccggcctctgctactgtttttggagaggctcccaccacttcagtgaacgttgct
agcagcggttctcaatcacatggagcatccgtcacagcagtgaccgcgtctggtgggtca
actttggcatcaccgccacacgacagcatcagcaccgcatccagccgcagcccgaaggct
gccccgagcacaggtgagacgtctgtggagaaaaacacgccgaggaaacgcacagcggca
ccgaggaggagcgcttcggctcggctaaagagtttgaacggcgcagctataacgacgagg
cggaatagcaacacggcggtgggcgagaacgtcagctcgccggatacaactccatcaaac
tccaccagaccggtcacatcctccatcaacacatcgactttcacgctgtccaacgcaagc
ctccctgtgggtcaggctgccattgctctggaccgggggacgcccaccatcgctttacac
agactccccagtcacatagtagccagtatagcccagaacggcaacgggaccacggtctcg
gccctggcccagcagggggctcgtccgggagccaccatctcctctgcttcccaggaggag
cacagcaaatccaccacggatactggggcttccaacgcagacgactgtcagtccaaaatt
gtaatgtccagccagtccggtagtgttagctcggtgataaactctgtgtcctcggcttcc
tctgctgctgtcacaccagcaacaacctcaacagcagctccaaccaccaccactactacc
accaccaccaccgtgagcccgcctctgatccctgcctcaacacctgccacatgtgtggct
ggtttggcaaccacgtcagcatgtggaccatctcagaccatatctgtcaccaccaccatc
agcatggtcagacccacagccccctctcccacagctgttgcagccacctctgcacagact
caaccccgtcctggacttgcagtgcctcaaaggattgtagccccccagctgattgtcaga
ccttcccagcagcaggctaccattcagctgccccctggctttaccatcccagctgagaga
ggagcgatgcgaaccgaggtgggacaactggtcatggttcctcagcaggcttttgcccaa
ggtcaagctccagctcaggctcagaacaacatctcactgcgacctgcaggccctaccagc
ggggtggccttcagagtgacgactccacagcagtctcctgcgacctctcagaccaccagg
cagtgttctttgaccccagccaagatggcgccggctccctctcccacttcttccagccct
gctctccagacctcttcatcatcttcatctttatcctcttcttcctgtcctgtactccgc
cctaaaggccctgtggcaccggccgtggcagtggcggctccgcagcagacccctatggtt
atagccccccaggcccccacccagtccaccccccagccggtgcagccggcaccgacgtgc
gtcacggcacccccaggagcttcggtcatatcccaggaaatgcaagaaaatgtgaagaaa
tgcaagaacttcctcgccacgctcatcaaactggcgtcacacaactctccttttcctgag
acttccaagaacgttaaagctctggtccaagacctgctggatgccaagatcgaacctgag
gagttcaccagccggctgcagactgagctcaagtcgtctccgcagccttacctggtgccg
tttctcaagaaaagcctcccggccctcaggctgtctctgctgaatagtcagcagtccctg
acccagcccctgcagcaaggagtcaaaccagcggccggtggcacccctcctgctgccatc
gtggctgggccggctgtccgcatacggcaccctaacagcgtcagcaccaccggtgcgctg
cctgctgggacgctcggacacacagctgctatgggggtgaagactggagggactgttggt
ggacaagtccggatgcccatggtgatcactcagtccatcagaccacaaggcacagtgggg
aagggagccatcattcaagcaggcagaagtccaatgggcctgcctgttcagatctctgcc
aatcagaaaaacaagctgaacgaccccggaggaggctctttcagagacgatgatgacatc
aacgatgtggcgtccatggccggggtgaatctgaacgaggagagtgcgagaatactggcg
accaactctgagctggtgggaacgcagatccgctcctgtaaagacgaggccttcctccac
ccgggactgctgcaccgacggatcctggaaaccgctaaaaagtttggagtgacagaagtt
tccacagaagcagtgacattcatctcacatgcaacacagtcacgactccggactcttgtg
gagaaagtttctatcatcgcccagcatcgactcgactcttgtaaggacgacgagtgctac
gagcagtcgggagacgttcgctcgcagcttcgcttcttcgagcagctggagaggatggag
aagcagaggaaggacgagcaggagagggagatccttctgaaagctgctaaaagtcgctcc
aggcaagaggacccagagcaagctcggctgaaacagaaagctaaggagtggcagcttcaa
gaacaggctgagattagacagcgagacgccaacctcacggcgctggctgccatcggacca
cgaaagaaacgtaaactggactcaccggggaccacgccgacaggggccgaggttcccagc
agcgcagcgggttctccggctggctcctcctccctcacctcctcttcccgtcagtacgca
cggcagcgcatcactcgtgtcaacctcagggacctcatattctacatggagcaggagaga
gagaccgcccactcgctcctcctctaccgagccctgctcaagtag
DBGET
integrated database retrieval system
