Nothobranchius furzeri (turquoise killifish): 107382153
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Entry
107382153 CDS
T05163
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7 isoform X1
KO
K12597
protein AIR1/2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107382153 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107382153 (zcchc7)
03016 Transfer RNA biogenesis [BR:
nfu03016
]
107382153 (zcchc7)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
107382153 (zcchc7)
Transfer RNA biogenesis [BR:
nfu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
107382153 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
107382153
NCBI-ProteinID:
XP_015809639
UniProt:
A0A9D3BMK2
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All DBs
Position
sgr08:complement(15554558..15694101)
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AA seq
666 aa
AA seq
DB search
MSHALSTLLTRSYGFENKNQPLDATDSSAVSRANVWSLGEMYSSIQDFKMLEDDLYREDG
GDSEVSEINSELEFHLYSQLHYSSNALELEDDEEKILEDQQLLEKTKDGDGKPEYPKDSK
PPSPDDHSYQKHLKKKKVVKQKKRQTVSKGPKLSSSAFEEVIVIDSSPVVISISESDSSN
DDGICAMKTSTPGRQEIQIRKSSLGVPVTVISSSSDTSESESDTDSSDSEGSDDLENWMI
LGQGMQDGDQSISLNLEAGSDYSTEDKEGGGGGGSWLVSDKDKEALIYNKDRGQRFVVQV
SNRYYTGKNVHCRNCNKTGHLSKNCPDPKKSSPCFLCGITSHQSRDCPNKHCNNCGQPGH
LFESCGERAYWHKHCYRCNLKGHFLDACPEIWRQYHMTTKSGLPVQQKAREKGQSAYCYN
CSMKGHFGFACKRKRMFSGVYPSSSLINRYDTAVDVKHRQRRMKLKADEMRETGCLPDPL
PTFLTHEPPKKKQKISLNMKNHSPHQTQKKYRHSPNHIFFTHDDIGNVIPKTKKSVNQQQ
SVRNLKPWKPKRPVPTSRDALPSRKLALDEAEDFPRGGGLQQKGKHTKNKRNKRKQVSLF
QLKAQNDSGSDPDRERTLGLASKNQKGKKKKNGKLHAQKTANKKSGAQYYPEDDDLFIIK
QRKKRR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgctctctcaactttgctaacaaggtcttatggttttgagaacaaaaatcag
cctctggatgccaccgactcctctgctgtgagcagagcgaatgtgtggtctttgggggaa
atgtatagctccatccaagacttcaagatgttagaagatgatctctaccgagaggatgga
ggagactctgaagtgtcggagatcaacagtgaactggagttccacctctacagccagctt
cactactcctccaatgctctggagctggaggatgatgaagagaagattttggaggaccag
caactgctcgagaagaccaaagacggtgacggaaaaccggaatatcccaaagacagcaag
cctccatcacctgatgatcacagttaccagaaacacctgaagaaaaaaaaagttgtgaaa
cagaagaagagacaaactgtctccaaaggtccgaagctgtcatcatctgcctttgaagag
gttattgtgattgactccagcccagtcgtcatctccatctctgagagtgattcttcaaat
gatgatggcatctgtgccatgaagacctcaactccaggtcgacaggaaatccagattagg
aaaagcagtcttggagtcccagtgacggtgatttccagcagctcagacacttcagaatct
gaatcagacactgattcatcagactcagagggttcagatgatctagagaactggatgatc
cttggtcaagggatgcaggatggagaccagtccatctcactcaacctggaagcagggtct
gactacagcacagaagataaagaaggaggaggaggaggaggaagttggctggtttcagac
aaagacaaagaggctctgatctacaacaaagaccggggtcagcggtttgtggtgcaggtg
tcaaacagatattataccgggaagaatgtccactgtaggaactgcaacaagactggacat
ctctccaagaactgtcccgaccccaaaaagtcgtcgccctgcttcctttgtggcataaca
agccaccaatccagggattgtcccaataaacactgcaacaattgcggccagcctggacac
ctctttgagtcctgcggcgagagggcctattggcacaagcactgctaccgctgcaacttg
aaaggacacttcctagatgcttgtccagagatctggagacaataccacatgacgactaaa
agcggccttcctgtgcagcagaaagcaagagaaaaaggtcaatcggcatactgctacaac
tgctccatgaaaggacactttggctttgcgtgtaaaagaaagcggatgttcagtggggtt
tatccaagctcctcgttaatcaatcgctacgacactgcggtggatgtaaaacacaggcaa
cgtcggatgaaactgaaggctgatgaaatgagagaaaccggatgccttccagatccattg
ccgacctttctcacccacgagccgccaaagaagaaacagaaaatcagcctgaacatgaaa
aaccacagcccccatcaaacccagaaaaagtacagacacagtccaaaccatatcttcttt
actcatgatgatatcggaaatgtcatacctaaaacaaaaaagagtgtcaatcagcagcaa
agtgtccgcaacctcaaaccgtggaagccaaagagaccagtgcccacctctagggatgcg
cttccatcaagaaaactagctttggatgaagctgaggacttcccaagaggaggagggttg
caacaaaagggcaagcacacgaagaataaaaggaataaaagaaagcaggtgtctttgttt
cagttaaaggcacagaatgacagcgggtcagatcctgatagagagaggactctggggctg
gcatctaagaatcagaagggaaagaagaagaaaaatgggaaactccatgcccagaagact
gctaataagaaatctggagcacagtattatccagaggatgatgatctgttcatcattaaa
caacgcaaaaagaggagatag
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