Nothobranchius furzeri (turquoise killifish): 107382361
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Entry
107382361 CDS
T05163
Symbol
casc1
Name
(RefSeq) protein CASC1
KO
K17580
cancer susceptibility candidate protein 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nfu01009
]
107382361 (casc1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nfu03037
]
107382361 (casc1)
Protein phosphatases and associated proteins [BR:
nfu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107382361 (casc1)
Cilium and associated proteins [BR:
nfu03037
]
Motile cilia and associated proteins
Dynein arm
107382361 (casc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Casc1_N
Casc1_C
Motif
Other DBs
NCBI-GeneID:
107382361
NCBI-ProteinID:
XP_015809967
LinkDB
All DBs
Position
sgr01:68648517..68655066
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AA seq
686 aa
AA seq
DB search
MAHKKNQKLKKQREEEERRQIEEEEALQAEREIKQREIERLELKDLERRDNELEELRYLL
EKNQIAVTELKRDAEENVQWERYLRCDVQPDPEDQRKVNSFITFWRDDTELKTTEVLKQC
HIAVRLVEEIEDLLKKATSPQKIQTYQESLRSLQELIYFKHNLTSEEILKSANKNIDIKT
RNFQTVIKDENITMCLWANLCKNPSLKLFNFEEVGLGFKLSKPLAKSNIAVRVIHTRYDH
LSMISRITHPRAHTTSRRSSVSSDQILRDSSVQKGEDDDGIPEQKSKKVLSIQEEGKTKD
PNPGGRGSQIFTQMEALKAESQVIPQPITRHASPVVDLMEYTPLGGVFYYEMFHLPHQAY
TVGQYVMQQISDKGLQVFLHPTETSSFRDNEDSTCPPVGASVTLPDRVVFFEPPHVARLD
ATCEQWRMDGISDIAYEEAEAKLSFSMETFQPFVLMQKTYLNLPFQSWELRPLGRSSALF
TIEGALFNLSITIQGNQCMLQLEQERGLSHLVGKWMSTPALKKAMLDAGVNIFVDEYTEN
YVSSCNKVGIIYLMDPLAEHAAYNQMALFASACAFSRSKWNAKCGAEHVVLQVCEHHDPS
PVPKSSWSLYLLGAQRSKKLEMTEDSEAFSSEHHPNSEFHSTFIHLLQDSLSPDGLDRTK
TSYCMFIDTIQSLLHSTRPLVYSETI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacaaaaaaaatcagaagcttaagaagcagagagaagaggaggagcggaggcag
atagaggaagaggaagcactgcaagcagagagagagataaagcagagggaaatagaaaga
cttgagctaaaggatcttgagcgtagagacaatgagctggaagaactgcgctatctactg
gagaagaaccaaatagcagtcacagaattgaaacgtgatgcagaggagaacgttcagtgg
gagagatacttgcgctgtgatgttcaaccagacccagaagatcagaggaaggtcaactca
ttcatcaccttttggagggatgacacagagctcaaaaccacagaggtgctaaagcaatgc
cacatcgctgtgaggctggttgaggagattgaagatcttctcaaaaaggctacaagtccc
caaaagattcagacgtaccaggagagtcttcggagtttacaggagctaatctacttcaaa
cacaatctcacaagtgaggagatcctcaagagcgcaaacaagaacattgatatcaagaca
aggaacttccaaactgtgattaaagatgagaatataaccatgtgcctctgggccaacctc
tgtaagaatccaagcttaaagttgtttaattttgaggaggttggtttgggcttcaagctt
tccaaaccgctggctaagagtaatatcgctgtacgggtaatccacacacgctacgaccac
ctgtcgatgatatccaggatcactcacccgagagcccacacgaccagtcgcaggtcttct
gtgagtagtgatcaaattctgagagactcgtctgtgcagaagggggaggacgatgatggt
atcccggagcagaaatccaaaaaggtgctgtccatccaagaggagggcaagacaaaggat
cctaatcctggtggtagaggaagccagatcttcacacagatggaggcactcaaagctgaa
tcacaagtcattccccagccaataacgcgccacgcgagtccagtggtagacctgatggaa
tacactcccctgggtggtgttttctactatgaaatgtttcaccttcctcatcaggcttac
actgtgggacaatatgtaatgcaacagatttcggacaaagggcttcaagttttcttacac
cccactgagacgtccagctttagggacaatgaggattctacctgtcccccggttggggcg
tctgtgactctgcctgaccgcgtggtcttctttgaaccccctcatgtggcccgcttggat
gccacatgtgagcagtggagaatggacggtatcagtgatatcgcctatgaggaggctgaa
gccaaactctccttcagtatggaaacattccagccatttgtgctgatgcagaaaacttac
ctcaaccttccctttcaaagctgggagctccggcctctgggcagaagctcggctctcttc
accatagagggagcgctctttaacctcagcatcacaattcagggtaatcagtgtatgctg
cagctggagcaggagagaggtctctcccatctggtgggaaagtggatgagcacacctgcc
ctgaagaaagccatgctcgatgcaggagtcaacatctttgttgatgaatacacagaaaac
tatgtcagcagctgcaacaaggtcggcatcatttatctgatggacccacttgcagagcat
gccgcctacaaccaaatggctctttttgcctctgcttgtgctttctcacggagcaagtgg
aatgctaaatgtggagctgaacatgtggtcctgcaggtgtgtgagcaccatgaccctagc
cctgtacccaaaagctcttggagtttgtacctgctgggggctcaaaggagtaagaaactg
gagatgacagaggacagtgaagccttctcatcagagcatcatcccaacagcgagtttcac
tcaacattcatccacttactgcaggacagcctgagtcctgatgggttggaccgaaccaaa
acatcctactgcatgtttattgacaccatacagagcctgctccattctaccagaccgctg
gtttattcagaaaccatttaa
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