Nothobranchius furzeri (turquoise killifish): 107382519
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Entry
107382519 CDS
T05163
Symbol
myom1
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107382519 (myom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
107382519 (myom1)
Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
107382519 (myom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Ig_J_second
C2-set_3
Receptor_2B4
C2-set_2
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
107382519
NCBI-ProteinID:
XP_015810166
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All DBs
Position
sgr08:complement(20066946..20107146)
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AA seq
1679 aa
AA seq
DB search
MCYTIELAYPLVVIFISSLTLKGCDCRLDALAGANIISVVWTTVPCGFAGISSCRRGFFF
PFKRLEFEGFCPGKTRGHSGLTLGAACSMSGSMPFYQKHHRHYDRSYRSTEAESKMRHYQ
SSSWLTAGSSTSSRSRGLNVSSHSGLEESRLSPLPKKAKPSYLAVDKENQIIGYVVPIFR
GSQEFATGLSDKEEARVRDTAAYMARRDLFTSGLEMERSEVISRKEAMRESAERISQNKR
IWILPAKDSAVLTGRIHEHEEHFKRMNKDSLMHPPEFVIKPRSHTVWEKQCVRLHCTVSG
WPDPSVVWYKNNVAIDPLASPGKYKLESRYSVHSLEISKCDFDDTAQYRVSAMNSEGELS
AFASVVVKRFKGEVDETLPVPRLGPVSEYGITFQIHIVDTFGVSFGREGETMSLGCTVII
YPALHRYQPEIQWYRDDVLLTPSKWTHVHWSGDRTTLTLTHLNKEDEGLYTLRVSTKSGY
ETYSAYVFVRDADAEVEGAPGAPLDVRCLDANKDYIIVSWKQPAIDRGSSILGYFVDRCE
VGTTHWVQCNDTPVKFARFPVTGLVEGRSYVFRVRSVNKSGISRLSRVSEPVAAMDPADR
ARMRGTSAPWTGQIIVTEEEPAEGVVPGRPLELKVTEATKNYVVLSWKPPGEKGLESIMY
YVEKCVSGTDSWQRVNTEIPVKSPRFALFDLAEGKSYYFRVRCCNSAGVGEPSEPTEAIT
VGDKLDIPSAPGKVVPTRNTDTSVVVSWEASSDAVELVGYYIEGSVVGSNVWEPCNNKPV
KGTRFICHGLMTGEQYVFRVRAVNAAGLSDFSQISEPVEVKAAIGGGIPHASPAPPYGIT
ILECVRDSMVLAWKQPTFIGGADITGYFVDYREVIDGVPGKWHEANIKAVSERAYRVSDL
KENRKYQFQVRAANMAGVGIPSMPSDTFLCEEWTIAVPGPPHDLQVREVRNDSLVLLWKP
PVYQGRDPVNGFYVDIKEANAPEEAWKGVNTKATEKTYIKVQNLKEGEMYVLRVRAQNKA
GVGKTSEVTEPVPAVTKPGTKEIVVDVDDDGIVSLNFECGNMTPDSKFVWSKNYEDIPDS
NRLNVETKGNKSKAVFSSLGEEDTGVYSCLVTHTDGASSSYSLTDEELKRLLLVSHDHKF
PIIPLKSDLAVELQEKGKVRFWLQAEKISANGKVDYVFNDNVLTQGEKYKMNFDKNTGVI
EMLIDSLTPADEGTYTFQLTDGKATNQSSLVLIGDVFKQLQKESEFQRKEWFRKQGPHFI
EGLGYEVTPECCVILKCKVGNMKKETSAHWYKDGHEIKADEHLGFAEGVLKLEIAQISRK
DAGVYEVVLKDDRGKDTSTLNLTDQGFKDLMNEVFGFIASSSTPLKITSTDEGIRLYTFV
SYYNDLLQVTWHYKDSAIAFSDRIKSGVVGEQLWLQITNPTEKDMGKYAIEFNDGKGGLR
RTVELSGQAFDDAFAEFQRLQAAAVAERNRARVAGGLPDVVTIQEGKALNLTCNISGNPV
PEVTWLKNDREITSDEHCILKFESGKFASFTITAVNTSDSGKYSILVKNKYGTESGDFTL
EITEGTPDLGVTSYWTDAEGNVVFGPNTPKEKMQTAATGTKKQKRKESVATPPVEKVENK
QGCNSRELKEDKAADGATTELKASDSEQTEDKIEDVDESTPAASCDQLAESAEERDATE
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgtgttacactatagagctggcttaccccctcgtggttatttttatctcctccctcacc
ttaaaaggctgtgactgccgcttggacgctctggccggggccaacattatttctgtggtg
tggaccacagtgccgtgtgggtttgctgggatatcaagctgcaggagaggattttttttt
ccctttaaaaggttggagtttgagggattttgtccaggaaaaacgagaggacactcgggg
ctcacacttggagcggcctgcagcatgtctggatcaatgcccttctaccagaagcaccat
cgacactacgatcgtagctaccgcagcacggaggcagagtccaaaatgagacactaccag
tccagcagctggttgactgctggcagcagcacatccagcaggagcaggggacttaacgtg
tcctcacactcgggcctggaagagagcagactaagccccttacccaagaaagccaagcca
tcgtacttggctgtggacaaagagaaccaaatcatcggctatgtagtgcctatcttcagg
ggcagtcaagagtttgctacaggattatcagataaagaggaagccagggtgagggacact
gctgcttacatggctcgcagggatttgtttaccagtggtctggagatggaaaggtcagag
gtgatttccaggaaggaggccatgcgcgagtcggctgagcgcatctctcagaataaaagg
atctggattcttcctgccaaggacagcgctgttctcaccgggaggatccatgagcacgag
gaacacttcaagcgcatgaacaaagacagcctgatgcaccccccagagtttgtgatcaaa
ccccgctcccacactgtttgggagaagcagtgtgtgaggctgcactgcaccgtcagcggc
tggcctgaccccagtgttgtttggtacaaaaacaatgtggcaattgatccccttgccagc
cctggcaagtataaacttgagagcagatacagcgtgcactcgctggagatcagcaaatgc
gactttgatgacacagcccagtatcgtgtctctgccatgaactctgaaggagagctgtct
gcatttgcctctgttgttgtcaaacggttcaaaggtgaagttgatgagacgttgccagtg
cctagacttggtccagtttctgagtatggcatcacgttccagattcacatcgtcgatacg
tttggagtgtcatttggaagagagggggagacgatgagcctgggttgtacggtcatcatc
tatcctgccctgcatcgctaccagccagaaatccagtggtaccgagatgatgttctgctg
actccttctaaatggacccatgtgcactggagtggagaccgaaccacactgaccctcact
cacctcaacaaggaggatgaggggctctacaccctgagagtctctacaaagtctggatat
gaaacatattcggcttacgtgtttgtcagagatgctgatgcggaggtggaaggtgctcct
ggagctcctctggatgtgcgttgtctggatgctaacaaggattacattattgtctcctgg
aagcaaccggctatcgatagaggaagttccattttgggctactttgtggacaggtgtgag
gttggaactacccactgggttcagtgcaacgacactccagtcaagtttgcccgttttccc
gtcactggcttagtggaaggccgttcctatgttttccgcgtgcgctctgtcaacaagagc
ggcatcagccgtctgtccagagtctcagagccagtggctgccatggatccagctgatcgg
gcccgcatgagaggtacttctgctccctggactggacaaatcattgtcacagaggaggag
cctgcagagggcgtagttcccggcagacctcttgagttgaaggtgactgaagcaaccaaa
aactatgtggtattgagctggaagcctcctggagagaagggccttgaaagcatcatgtac
tatgtggaaaagtgtgtttctggtacagacagctggcagagggtcaacacagagatcccg
gtaaaatctcctcgatttgctctgttcgatctcgctgaggggaaatcatactacttccgt
gttcgctgctgcaactctgctggtgttggtgaaccatctgaaccaactgaagccatcact
gttggtgacaagcttgatatcccatctgccccaggaaaagttgttcccactagaaacaca
gacacatctgtcgtcgtgagctgggaagcgtccagtgatgcagtggagttggtggggtac
tacatcgagggtagtgtggtgggcagcaatgtttgggagccatgcaacaacaagcctgta
aagggaaccaggttcatctgccacgggctgatgacaggagagcagtatgtgttcagggtg
agagccgtgaacgcagcagggctcagtgacttctcccagatttcagagcctgtagaggtg
aaagctgcgatcgggggcggcatcccacacgcctctcctgctccaccctatggcatcacc
attctggagtgtgtgcgtgactccatggtgctggcctggaaacagccgaccttcatcgga
ggcgctgacatcacaggctactttgttgattaccgtgaggtcatcgatggtgtgccaggg
aagtggcatgaggccaacatcaaggccgtcagcgagagggcctacagggtgtctgacctg
aaggaaaacaggaagtaccagttccaagtgcgagcagccaacatggcgggtgtgggtata
ccatcaatgcccagtgataccttcctgtgtgaggagtggaccatcgcggtgccaggacca
cctcacgatttgcaagttagagaagtgcgaaatgactccctggtgttgctatggaaacct
cccgtgtaccagggccgcgatcctgtcaatggtttctacgttgacataaaagaagcaaac
gcaccagaggaagcctggaagggagtcaacaccaaggccacagagaagacatatatcaag
gttcagaatcttaaagaaggagaaatgtacgtgttacgtgtgcgtgctcagaataaagcg
ggtgttgggaaaacctcagaagttacagagccagttcctgctgtgaccaaaccaggcacc
aaggagatagtggtggatgttgatgatgacggtatcgtctccctgaactttgaatgcggc
aacatgacccctgactctaaatttgtgtggtccaagaactacgaggacatccctgactct
aatcgcctgaatgtagagaccaagggaaacaagtctaaagctgttttcagctctctcggg
gaggaggacacaggtgtttactcgtgtcttgtcacccacactgatggtgcttcatccagc
tacagtctcaccgatgaagagctaaagaggctgctgttggtcagtcacgaccacaaattc
cccattattcccctgaagtcagatttggctgtggagctgcaggagaagggcaaagttcgc
ttttggctgcaggcggagaagatttcagcaaacggcaaagtcgattacgttttcaacgac
aatgttctcactcagggagagaaatacaagatgaactttgataagaacactggtgtgatt
gagatgctcatagactctctgactccagctgatgaaggcacgtacacattccagctgacg
gacgggaaagccactaaccagtccagcttggtgctgatcggtgatgttttcaagcagctg
cagaaagaatcagagttccagaggaaagagtggttcaggaaacaaggtcctcactttatc
gaaggcttgggttatgaggtgacacctgagtgctgcgtgatcctcaagtgcaaagtcggc
aacatgaagaaggagacgtcagctcactggtacaaagacggacatgagatcaaagcagat
gagcacctcggctttgctgagggagttctgaagctggagattgcacaaatttccaggaag
gatgctggtgtgtatgaagttgttctaaaggatgatagaggaaaggacacctccacactg
aatctgactgatcaaggtttcaaagacctgatgaacgaggtgtttgggtttattgccagt
tcctccactccgctgaaaatcacaagcacagacgaaggaatccgactctacaccttcgtc
agctactacaatgatttactccaggtcacgtggcactacaaggattctgcgatcgcgttc
tctgaccgcattaagagcggcgtggtcggagagcagctgtggcttcagatcactaatccc
acagagaaggacatgggaaaatacgccattgaattcaacgacggaaagggtggcctcagg
agaaccgtggagctctctggtcaagcatttgatgacgcatttgcagaattccagagactc
caagctgcagctgttgcagagagaaatcgtgctcgagtagcaggaggtctgccagatgtg
gtcaccatacaggaaggcaaggctcttaacctcacctgcaacatttcgggcaacccagtg
cccgaggtgacctggctgaagaacgacagggagatcacgtccgacgagcactgcatcctg
aagttcgaatcgggcaagttcgccagcttcaccatcaccgccgtgaacacgtcagactct
ggcaagtacagcatcctggtgaagaacaaatacggcacagagagcggagacttcaccctt
gagatcacagaaggaacacctgacctgggggtgacttcctactggaccgatgcagaagga
aatgtggttttcggtccaaacacccctaaagaaaagatgcagactgcagcgacagggaca
aaaaagcagaaacgaaaggaatctgttgccacacctcctgttgaaaaggtggaaaacaaa
caaggctgcaacagcagggagctgaaagaggacaaggctgcagacggtgctacaacagag
ctaaaagcttcagactctgaacaaacagaggataaaatagaagatgtggatgagtcaacg
ccggctgcatcctgtgatcagcttgctgagtctgcagaagagcgtgatgccactgaataa
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integrated database retrieval system
