Nothobranchius furzeri (turquoise killifish): 107382560
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Entry
107382560 CDS
T05163
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107382560 (scrib)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
PDZ_2
LRR_4
LRR_1
LRR_13
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
107382560
NCBI-ProteinID:
XP_015810226
LinkDB
All DBs
Position
sgr08:complement(21112536..22050391)
Genome browser
AA seq
2008 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLKAVPDEIFRYSRSLEELLLDSNQLKELPKAFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCRALEIADFSGNPLTRL
PEGFTQLRTLAHLSLNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNELELLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLVELPSELS
GLLALTDLLLTQNMLKIIPDGIGCLKQLSILKVDQNQLTHLTDSVGECENLTELILTENL
LQSLPRSLGKLKKLTNLNVDRNRLNSVPKELGGCTSLSVLSLRDNCLGKLPAELADATEL
HVLDVVGNRLQNLPFTLTNLNLKAMWLAENQSQPMLKFQTEDDQKTGEKVLTCYLLPQQP
SPSLENLLQNNVDDVSTDSNLNRVSVIQFQEETKAAEEEDKRRGLQRMGTPHPSELKMMK
KVIEERRNEAYPSRPDGEDESPDSPKKRLSDVSNQSHDSQASNSTLSATSHEDGQNAALQ
KEDFVDGQSPQEEEDPDEMEVEYIEPTVHFAEEPIIRGGDEEDGENDEESDEEDERPIVP
MERQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDGLNSSTQTAEDEENEEEEEEE
EQSVSALQLHHRLEQLEDLRHQGNSSQVKGVSFDQVNNLLIEPARIEEEEHSLTIVRQTG
GLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVKVGDKLLEVNGVDLHEAEHHTA
VEALRNSGATVSMTVLRERMVEPENAITTTPLRPEDDYFPRERRSSGIAFNLETCPSGPR
QRLSTCLIRNDKGLGFSIAGGKASTPYRTGDTGIYISRIAEGGAAHRDGTLRVGDRVISI
NGVDMTEAKHDQAVALLTGTSPTIALLVERDPTAPGGSPSQSRRRAHSPPPPEPSDSPDQ
EEEGLQGNHLGRMEDEYPIEEVVLVKSGGPLGLSIVGGSDHASHPFGINEPGVFISKVIP
QGLACQSGLRVGDRILEVNTIDLRHATHQEAVRALLANKQEIRMLVRRDPSPPGMQEVLI
QKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSTGAAARDGRLQVGMRILEVNNH
SLLGMTHTEAVRVLRAIGDSLVLLVCDGFDPSKVTAVEASPGIIANPFASGIVRKNSMES
ISSIDRDLSPEEMDIIQKESEMVRESSQWEREEMEKVERMRLEREEATRLLEEETENLGT
GPLKLDYKTLAALPTTSLQKVNRFSTSVAPMEVPLQAPLEPLGFGLSQPNKPLTEDDNHL
VTPFSPNGASPGADSCGSAAALTFTPEEEEECLVDSQPMCFKENPFLVANRKGRGLPPGE
QILSGPPVGYGTQGKLQPWLFSKAPSSDYTRTDSPIREAPYSPTIQPANIHYTSTPTVKD
SPSSTRPGAIQPVGRVQPRTSPGTPEGRSPNPFQHGPSPFNSQTSPRAPSPSSPDELPLN
VKQAYKAFAAVPRSLAVLEPPQELFGGRNNLYPRHPSPEPEVLDEVFDDKNDSQERAGKG
LASKVSPRSSLSSDRQGYMSLAAVPRLSRLSVDLQSPSPGGRGSPEQRSFRDRQKYFEID
VKQQTPEKPKPRVSLVGEDDLKKMREEEERKFEQRAREYLMDDDEEDEEEDLAKQVAQMK
ATGKVLLDGVEYKVEPISSPSQHCSTPPNYSFTPPSHGGSSGPSSVDGKGDSQRNSLEDG
FRLEQRPNSMTGLVSAYPGESAAPIRTAKAERRHQERLRMQSPELAVAPDKDLSPAEKRA
LEAEKRAMWRAARPYGLEEDVRQYEQDLAKRLYRARVRASQGADAAPQPQSSTSSSAASQ
LRMKSLEQDALKAQMVIAKSRDGKKRGTLDQLTESPSPAPTPSPTPMEELSPRALTSPGR
LSLSSKKFDYRQFAAIPSSKPVYDIQSPETTEDVRYIDASSDPVHIVSPEVEIPTPLPAT
SALEEMALYSNRRKLRQGRRSLETAVPT
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcgctgcaaccgccacgtcgagtcagtggacaagcgg
cactgcaacctgaaggctgtccctgatgaaatcttccgctacagccgcagcctggaggaa
cttctgctcgattccaaccaactcaaagagctgccaaaggctttcttcagactactgaac
ctacggaagctcggcctgagtgacaatgagatccagagactccctcctgaggtggccaac
ttcatgcagctggtggagctggacatctccagaaatgacattcctgagatccccgagagc
attaagttctgccgggcattggagattgctgatttcagtggaaaccccctcaccagatta
ccggagggtttcactcagctccgaacgctggcgcacctctcactcaacgacgtgtcgtta
caaacgttacccaacgacatcggaaatctagctaacttggtgacattggagctgagagag
aacctgctgaagtctttgcccacgtcactgtccttcctggtgaaactggaacagctggac
ctcggcagcaatgaactggaacttttgcctgacacactcggtgctctacccaatctaagg
gagctttggttagaccgtaaccagctgtcttcactaccaccagagctggggaaccttcgg
cggttggtgtgtctggacgtctctgagaaccgcctggtggagcttccctcagagctgagc
ggcctgctggctctcaccgacctgctgctcacacagaacatgttaaaaatcattccagac
ggcattggctgtctgaaacaactttctatcctgaaggtggaccagaaccaactaacccac
ctgactgactcagtaggggagtgtgaaaacctcacagaacttattctgacggagaatctt
ttacagtcacttcctcgctcgctgggcaagctgaagaagctgacaaacttgaatgtagac
cgaaatcgcctgaacagcgttcccaaagagctgggtggctgcaccagcctcagtgtcctc
tccctgagggacaactgcctgggcaaactgcctgctgagctcgcagatgccactgagctg
catgtgctggatgtggtcggaaaccgattacaaaacttgcctttcaccctgaccaacctc
aacctgaaggccatgtggcttgcagagaaccagtcgcagccgatgctcaagttccagaca
gaagatgaccagaaaactggagagaaagtgttaacctgctatttactaccacagcagcct
tcaccaagcctagagaacctgctgcagaacaatgtggacgacgtttctacagacagcaat
ctgaaccgggtgtcggtcattcagttccaggaagagaccaaggctgcagaggaggaagat
aagcgcagaggcctccagcgcatgggaacaccacatcccagtgagctgaagatgatgaag
aaggtgatagaggagaggaggaatgaagcctacccatccagacctgatggagaagacgag
tcgcctgactcaccgaagaagcgactcagtgacgtttccaatcagagccacgactcccag
gcttccaacagcactctgtcagccacctcccacgaagacgggcaaaatgcagccttgcaa
aaggaggactttgtggacggccagtcccctcaggaagaggaggacccggatgagatggag
gtggagtacattgagccaactgtgcactttgcagaagagcccatcatccgtggtggggat
gaggaggatggggagaacgatgaagagagcgatgaggaagatgagaggccgattgttcca
atggagagacagaggctgatcagaaaggacacgccgcactacaaaaagcacttcaaaatc
accaagctgcccaaacccgaggccgtggctgctctgctgcagggcttcagcccagacggg
ctcaactcttcgacacagactgccgaggacgaggagaatgaagaggaagaggaagaggaa
gagcagagtgtcagtgcacttcaactccatcatagactagaacaactggaggaccttcgg
catcaaggcaactccagtcaagtgaagggggtgtcatttgatcaagtcaataatctgctg
attgaacctgctcgaattgaggaggaagagcactcgctgaccatcgtgagacaaactggt
ggtctgggtatcagcatcgctggagggaaaggatctacgccttacaagggagatgatgag
ggaatcttcatctccagagtatctgaagagggtcctgcagcaagagcaggggtgaaagtt
ggagataaactcctagaggtaaatggggtagacctccatgaagccgagcatcacactgcg
gtggaagctctccgtaactccggtgctaccgtctccatgaccgtacttcgagaacgcatg
gtggagccggagaacgccatcaccaccacgccgctgaggcctgaggatgactacttccca
cgagagaggcggagcagcggcatcgcctttaacttggagacctgtcccagcgggccgcgg
cagcgactgtccacctgcctgatccgcaacgacaagggtctgggattcagcatcgcaggg
ggaaaagcctctacgccctaccgcaccggagacacgggaatctacatctctcgaattgca
gagggtggagcggcacacagagacggcacgctgcgtgttggggacagggtgatctctatc
aatggtgtagacatgacagaggccaagcacgaccaggcagtagctcttcttaccggcacc
tctcccaccatcgcgctgctggtggagcgagacccgactgcaccgggaggctctccaagt
cagagccggagacgagcacactcccctccacccccagaaccctcggattctccggaccag
gaggaggaaggccttcaggggaaccacctgggtcggatggaggatgagtatcctattgag
gaagtggtcctggtgaagtcaggtggtcctcttggactgagcatcgttggaggtagcgac
catgctagtcacccttttggcatcaatgaacccggggtgtttatctcaaaggtgattcct
caaggtctagcatgtcagagtggccttcgtgtgggagaccggatattagaggtgaacacc
atcgacttgcgacacgccacacaccaggaagctgtccgcgccctgctggccaacaagcaa
gagatccgtatgttggtgcggagggacccttcgccacctgggatgcaggaagttttgatc
caaaagcagccgggggagaaacttggcatcagcatccgtggaggggccaaaggtcatgct
gggaacccctttgatcccacagatgagggcatcttcatctctaaggtgagttcgactgga
gctgcagcacgagatggacggctgcaggttggcatgcgtatccttgaggtgaacaaccac
agcctcctgggaatgacccacacagaggcggtacgagtgctgcgcgccattggagactcc
ctggtcctgctagtgtgcgacggctttgacccatccaaagttacagccgtggaggcatct
cctgggattatcgccaacccatttgcatctggaattgtacgcaagaacagcatggagagc
atctcctccatagaccgagacctgagcccagaggagatggatataatacagaaggaatcg
gagatggtgagagaaagctcacagtgggaacgagaagagatggagaaagtggagcgaatg
cgtttggagcgtgaggaggcaactcgcctgctagaagaggagacggagaacctcggcact
ggacctttaaaacttgactacaaaaccctggcagcgctgcccaccaccagtctgcagaaa
gtcaacaggttctcgacctctgtcgctcccatggaggtccccctgcaggcccctttagag
cccctgggctttgggttgagccaacccaacaaacccctcacagaggacgataatcatctg
gtaactccgttttccccaaatggagcgtcccccggcgctgacagctgcggctcagcagcc
gcgttaacatttactcctgaggaggaagaggagtgcctggtggattctcagcccatgtgc
ttcaaagagaatcctttcttggtggctaatcggaaaggaagaggtcttcctcctggagag
cagattctgtcggggcctccggtgggctacggcacgcagggaaaactgcagccgtggttg
ttcagcaaggcaccttcctctgattacacccggacagacagccccatcagagaagcacct
tactcccccaccatccaaccggcaaacattcattacacctccactcccacagtcaaggac
agcccttcatcaacacgacctggtgctatccagcccgttgggcgcgtgcagccccggact
tcccctggcactccggagggccgcagtcctaacccctttcagcatggtccctccccattc
aactcccagacctctcctcgcgccccctccccctcttcgcccgacgagcttccgttgaat
gtcaaacaggcatacaaggcgtttgccgccgtgcctcgatcactggccgtgctggagccg
ccgcaggagctgtttggcgggaggaacaatttataccctagacatccttcaccagagcct
gaagtgctcgatgaggtgtttgatgataaaaatgacagtcaggagagagctggtaagggt
ttggctagcaaggtctcgccccggtcctccctctcatctgatcgccaaggctatatgagc
ctggcagcagtgcctcgactctccaggctctccgtggacctgcagagtccttctcctggt
gggaggggaagcccagagcagcgctcgttcagggacaggcagaaatactttgagattgat
gtgaagcagcagacgccagaaaagcccaagccccgagtctccctcgtgggggaggacgat
ctgaagaaaatgagggaggaggaagagaggaagtttgaacagcgggcacgggagtacctt
atggacgacgatgaggaggatgaggaggaggacctggctaagcaggtggcacagatgaag
gcaacaggaaaggtgctgttggacggagtagagtacaaggtggagccgatatcctcccca
tcccagcactgctccaccccacccaactacagcttcacgcctccaagccacggaggcagc
tcagggccgtcatcggtggacgggaaaggagactcccaaaggaattccctggaggacggt
ttcaggctggagcagaggcctaactccatgacgggtctggtttcagcgtaccccggagaa
tcggcagctcccatccgcacggccaaagcggaacgacggcatcaggagaggcttcggatg
cagagtcctgagctggctgtggcccccgacaaggacctgtcccccgcagagaaacgagct
ctggaggctgagaagagggccatgtggagggcggcacggccctatggcctcgaggaggat
gttagacagtatgagcaggacctggctaagaggctgtaccgggcccgtgtgagggcctct
cagggcgcagatgcagccccccagccccaatcctctacctcctcctctgcagcctcgcag
ctcagaatgaagtctctggaacaagacgctctgaaggctcagatggtcattgccaagtct
cgggatgggaagaagcgtgggacactagaccagctgacggagtcaccctcgcctgctcct
acaccttctcccactcccatggaagagctcagtcctcgagcgttaacctcgccaggccgg
ctgtccctgtcatcaaagaagtttgactaccgacagtttgccgccattccttcttccaaa
cccgtatacgacattcagtctcctgaaaccactgaggatgtgcggtacatcgatgcctcc
agcgatccagtgcacatcgtgagtccagaagtggagatacctaccccgctgcccgccacc
tcggccttggaggaaatggccttgtacagcaacagacgcaagctgagacagggccgccgc
agcctggaaaccgccgtgcccacatag
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