Nothobranchius furzeri (turquoise killifish): 107382578
Help
Entry
107382578 CDS
T05163
Name
(RefSeq) transcription factor Sox-17-beta.1-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107382578
Transcription factors [BR:
nfu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107382578
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
AmyB_C
Chlor_dismutase
Motif
Other DBs
NCBI-GeneID:
107382578
NCBI-ProteinID:
XP_015810269
UniProt:
A0A8C6L3P3
LinkDB
All DBs
Position
sgr08:20301523..20302902
Genome browser
AA seq
309 aa
AA seq
DB search
MVTVSIMHFSQDRAHFQLCANSTEREGLCATDGEQTSEVLPPSPGPSSPLSVHSESSCTS
PEAKSAPTQQRVRRPLNAFIIWTKEERRRLAQLNPELENTDLSKILGKTWKSMSLAEKRP
YMQEAERLRVQHTIDYPNYKYRPRRRKQPKRSSQPRPAEAFLCSSDFSAPCNLTCLLQNQ
QQHLQSAPHFTHSPVLQSSHPSLSGFPGSAAVYSGPPVHQAEHQEYFGSQHRHLQQHHFS
TSGPGMEERESRVCRLQVGPSKPSLEIYLNQVHLDMLYDLDRSEFEQYLCPSHHRSEALD
LSRGGQCST
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccgtctccatcatgcatttcagccaagatcgcgctcatttccagctttgcgca
aactctacggaaagagagggtttgtgcgccacagacggggagcagacgagtgaggtgctc
cccccgagtccgggaccttccagtccgctgtccgtccactccgagtccagctgcaccagt
cctgaagccaagtctgctccgacacagcagagggtcaggaggcccctgaacgcgtttatc
atctggaccaaagaggagcgcaggaggctggcgcagctcaacccagaactggagaacacc
gatctcagcaaaatactcggaaaaacctggaagtccatgtccttggctgagaagcgccca
tacatgcaggaggctgaacgcctgagggtccagcacaccatagactaccccaactacaaa
tacaggcctcggcgcaggaagcagccgaagaggagctcccagcccagaccagcagaagct
tttctctgcagctcagacttcagcgctccatgcaacctcacctgtttgctccaaaaccag
cagcagcatctccaatccgcccctcacttcacacattcacctgtgcttcagagcagccac
ccaagcctctcagggtttccaggttcagctgctgtttactcaggccctcctgtgcaccaa
gcagaacatcaagagtactttggttcccagcacagacacctgcagcagcaccatttctcc
acgtctggtcctggcatggaggagagggagtctagagtctgcaggctccaggtgggtcca
tcaaagccctcactggagatctatctgaaccaggttcacctggacatgctgtatgatctg
gaccgaagtgagtttgaacagtacctgtgtccgagccatcaccggtctgaggcattagat
ctcagcagaggaggacagtgctccacttga
DBGET
integrated database retrieval system
