Nothobranchius furzeri (turquoise killifish): 107382613
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Entry
107382613 CDS
T05163
Symbol
fmr1
Name
(RefSeq) fragile X mental retardation protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107382613 (fmr1)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107382613 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
107382613 (fmr1)
mRNA cycle factors
Stress granule specific factors
107382613 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
107382613
NCBI-ProteinID:
XP_015810346
UniProt:
A0A1A8BAB1
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Position
sgr01:109183..132527
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AA seq
598 aa
AA seq
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MEELVVEVRGTSGAFYKAFIKDVHEGSVTVAFENNWQPERQIPFQDVRFPPPAGFSKEIN
ESDEVEVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPVNPNKP
ATKTTFIKIRLDVPEDLRQMCSKESAHKDFKKAIGAFGVTFDSEKKQLVILSVNEVTTKR
ANMMSDMHFRSLRTKLSLMLRNEEASRQLESSRQLASRFHEQFVVRDDLMGLAIGTHGAN
IQQARKVPGVTNIDLDEETCTFHIYGEDQDAVRIARSYLEFSEDVIKVPRNLVGKVIGKN
GKLIQEVVDKSGVVRVRIEPENDKKSPAAAAAAATDEGMVPFVFVGTKESISNATVLLDY
HLNYLKEVDQLHLERLQIDEQLRQIGGGSGGGGPGPRNPKDKAYVFDNNMGMGRGAGKPY
AGGRGGRGRRGGGAAFTSGTNSEASNASETESDHREELSDWSLAPTEELMTGGGTLPRRT
DGRKRAGGGGGLRGRGGRGRAGGGYKGEDVQWSEPRPRHIRDPKTRAQEDTLQIRVDGNN
ERSVQHSSGGRGGGAGPSSSQSGVSPDGPPRHHHQRPVRERGMKKDKPDAPALVNGVS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggttgtggaagtgagagggacgagtggagccttttataaggcttttatc
aaagatgtccacgagggatctgtcaccgtggcttttgaaaacaattggcagccggaacgt
cagatcccattccaggatgtccgcttccctcctccagcgggcttcagcaaagagatcaac
gaaagcgacgaagtggaggtatactccagggctaacgacaaagagccgtgtggatggtgg
ctggcaaaggtccgcatggtgaaaggagagttttacgtcatagagtatgcagcatgcgac
gccaccttaaacgagatagtgactctggagcggttacggccggtcaacccaaacaaaccc
gccaccaaaaccaccttcataaagatcaggctggatgttcctgaagatctacggcagatg
tgctccaaggagtcggcgcacaaagactttaaaaaggccatcggagcgttcggcgtcacc
tttgactcggagaagaagcagctggtcattttgtcagttaacgaggtgacgacgaagcga
gccaacatgatgagcgacatgcacttcaggagcctccgcaccaaactgtcgctcatgctg
cgcaacgaggaggccagcaggcagctggagagttccagacagctagcgtcgcgtttccat
gaacagtttgtagttcgagacgatttaatgggcctggccatcggtactcatggggccaac
atccagcaagcccgaaaagttcctggagtcaccaacatagacctggatgaagagacctgc
accttccacatatacggagaggaccaggatgcggtgcgtatagctaggagttaccttgag
ttttccgaagatgtcatcaaagttccccggaacttagtagggaaggtgatcggcaagaat
ggaaaactgatacaggaggtggtcgataagtccggtgtggtccgggttcggatcgagcca
gagaatgataaaaagagcccggcggcggcggcggcagcagcaacagatgagggaatggtg
ccgtttgtgtttgtggggaccaaggagagcatttctaatgcaaccgttctgctggactac
cacctcaactacctgaaggaggtggaccagctgcatctggagcgtcttcagattgacgag
cagctgaggcagataggaggtgggagtggaggcggggggcccggaccccgaaaccctaaa
gacaaagcctacgtgtttgataacaacatggggatgggccgaggagcagggaagccctac
gctggaggtagaggtggacgaggacggcgagggggaggagcggcgttcacctcaggcacc
aactcggaagcatccaacgcttcagagaccgagtcggaccacagagaggagctcagtgat
tggtccctggcgcccacagaggagctgatgacaggaggcgggaccctgccccggcggacc
gatgggaggaagagagcgggaggcggaggaggtctgaggggacgcggtgggagagggaga
gcagggggaggttataaaggtgaagatgtgcagtggagcgagccaagacctcgtcacatc
agagaccctaaaacaagagcccaggaggacaccttacagatccgtgtggatggaaacaac
gagcggagcgtgcagcactcctcaggtgggcgaggaggaggagcggggccttcctcatcc
cagagtggcgtcagcccggacggcccgcctcgccatcaccaccagagacccgtgagagaa
cgagggatgaagaaggacaaaccggacgctcctgcactggtgaacggagtgtcatag
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