Nothobranchius furzeri (turquoise killifish): 107382621
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Entry
107382621 CDS
T05163
Symbol
rbm17
Name
(RefSeq) splicing factor 45 isoform X1
KO
K12840
splicing factor 45
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107382621 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107382621 (rbm17)
Spliceosome [BR:
nfu03041
]
Complex A
U2 snRNP components
U2 related factors
107382621 (rbm17)
Complex B
107382621 (rbm17)
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Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
107382621
NCBI-ProteinID:
XP_015810321
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Position
sgr01:64330913..64354068
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AA seq
423 aa
AA seq
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MSLYDDLGVGASDPKTEGWSKNLTMLQSQLKVKKAALTQAKTQRMKQSTVLAPVIDLKRG
GTSDERQNIDTPPHIAAGLKDAAPSGFSSSDVLIPLADEYDPMFPNDYEKVMKRHREEQQ
RKREQERQKEIEEREKRRKERHEGGGGAPSGFSRFPATEEDSEEEEEYEKEWRKRSMGGA
AIAPPSSLVDKDGSSYTYEDEGRPARGSKAAIPPPMYEDSDRPRSPPLPSSSFLANMGGT
VAHKIMQKYGFKEGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDAAEKPAGSSQSAGAEI
PGGGFAVDPSKKSDANPLTEILKNPTKVVLLRNMVGRGEVDEDLEGETKEECEKYGKVVK
CVIFEIAEVLDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLG
EQV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtacgatgatctcggcgttggtgccagtgaccccaagaccgaaggctggtcc
aagaacttaacgatgctgcagtctcagctgaaggtgaagaaggctgctctgactcaggct
aagacccagcgaatgaaacaaagcaccgttttagctccggtcattgatctaaagcgagga
ggaaccagtgatgagcgacagaacattgatacccctcctcatatagcagctggactcaag
gatgcagcacccagtggtttctcctccagcgatgtgctcatcccgttggccgacgagtac
gaccccatgttccccaacgactacgagaaggtgatgaaacgtcacagagaggaacagcag
cgcaagagggagcaagagcgtcagaaggagatcgaagagagagagaagaggaggaaagaa
agacacgaaggtggtggaggagctccgagtggcttctctcgtttcccagctacagaggaa
gactcagaggaggaggaagaatatgagaaagagtggaggaaacgaagtatgggtggagca
gccatcgcccctccttcatcacttgtagacaaagacggttcttcgtatacttatgaagat
gaaggtcgtcctgccagaggctccaaggcagccattcctccacccatgtatgaagactcc
gatcggccccgttcgcctcctttaccaagtagctccttcctggcaaacatgggaggtacg
gtggcccataagatcatgcagaagtacggcttcaaagaaggtcagggtctggggaagcac
gagcaaggcctgagcacggccctgtctgtggagaagaccagcaaaaggggcgggaagatc
attgtgggcgacgctgcagaaaaaccagcggggtccagccagtcagctggtgctgagatt
ccaggaggaggctttgcagtggatccttccaagaagtcagatgccaatccactcactgag
atcctgaaaaacccaactaaagtggttctgttgaggaacatggtgggtcggggagaagtg
gacgaagacttggagggagagacaaaagaagagtgtgaaaaatatggcaaagttgttaaa
tgtgtcatttttgagatcgcagaagtgctagatgatgaagccgtcaggatatttctggag
tttgagcgggtcgagtcggccatcaaagctgttgtggatctaaatggacgttattttgga
ggacgagtcgtcaaggcctgcttctacaatctagacaagtttcgggttttggatcttggt
gagcaggtctga
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