Nothobranchius furzeri (turquoise killifish): 107382744
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Entry
107382744 CDS
T05163
Symbol
clasp1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107382744 (clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nfu04812
]
107382744 (clasp1)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
107382744 (clasp1)
Cytoskeleton proteins [BR:
nfu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
107382744 (clasp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
CEP104-like_TOG
HEAT_EZ
TOR1L1_N
Adaptin_N
Sec7-like_HUS
Cnd1
ParcG
MMS19_C
HEAT_DAAF5
Paxt-1_C
TAN
Motif
Other DBs
NCBI-GeneID:
107382744
NCBI-ProteinID:
XP_015810490
LinkDB
All DBs
Position
sgr08:complement(34493570..34550265)
Genome browser
AA seq
1623 aa
AA seq
DB search
MMEPSMENCLAQVLQKDMGRRLQVGQEIIDYILDQEKSHDLEQDQTALDKMVDGIASSWV
NSSNFKVALLGLDLLSALVTRLQDRFRAQVGTVLPSLIDRLGDAKDQVREQDQSLLLKIM
EQAASPQYVWDRMLGGFKHKNNRTREGVCLCLITTLNTYGAQGLTLSKIVPHICNLLGDP
TSQVRDGAISCLVEIYRHVGERVRLDLSKKGIPQSRLNVIFSRFDEVQRSGNMIPSSGSD
KNFEDEDSVDGGRSSSSSSSKVPPGGRRTVMSSARRPSSASSTKSTGKEAAAGAVDEEDF
MKAFEDVPSVQIYSNRELEDQLTKIREVLSDDKHDWEHRVVALKKVRSLMLAGAAEYEGF
PQQLRLLEAAFKLSAKDLRSQVVREACITLGHLSSLLRNKFDHGAESVMPTLLNLVPNSA
KVMATSGMAAIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLMLQEWQTNTLER
HVAVLTETIKKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKALQSYLKS
SDSIVSLPQSDRSSSSSQESLNRPLPVKSVISGSITRSKLVGTRVSTTPGSLQRSRSDID
VNAASSAKSRLSTVPASSPFSSASTLPPGSYASLDGTAGKSDGRVRTRRQSSGSVGGASP
SVVDSRGRSRAKVVSQSQRSRSANPISAGSRSSSPGKLLGSGYGRIPRATVSVSNTPTDK
RSRIPRSQGCSRETSPNRLGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFAPLASRR
HSRSTSALSTADPHSQSDRYGLIHQARISASVNAMRVLNTGTEVEAAVADALLLGDSRNK
RKPLRRRYESPGMYSDDDANSDASSACSERSYSSRNGGIPHYLRQTEDVAEVLNHCASSN
WSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITVH
REDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPFDQQFNILMRFIVDQTQ
TPNLKVKVAILKYIESLAQQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKTLHNWVS
EELAGRSSSAALLTTESNQEERCKQAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKL
LHSHLKNSSNTSSNMGSPSNTIGRTPSRHTPSRTSPLTSPTNCSHGGLSPSRLWGWGIDG
LSKHPPAPPPPPPPHSTPAAPSLRVLRRAYSPSMMEYDTENMNSEEIYSSLRGVTEAIQS
FSYRSQEDLNEPVRREGKRDDGAGREGVASSPGSDSRVGLEMVEGGRTALDNKTSLLNTP
SPRSFSGPRSREFSPYGYGETICTYDKSALKEAVFDDDVEQFRDCRRQESGENQMAPPKG
FSPVGSDLVADLLKELSNHNERSEERKGALVELLKITREDNTAVWDEHFKTILLLLLETL
CDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLA
GSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERITKESLLQLLPDIIPGLLQGYDN
TESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVS
SHS
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcccagcatggagaactgcctagcccaggttctgcagaaggacatgggccga
cggctgcaggtgggtcaagagatcatcgattacattctggaccaagaaaagtcccacgac
ttggagcaagaccagacggcactggacaagatggtggacggcatcgccagctcctgggtc
aactccagcaacttcaaggtggctctgctcggtttggacctcctatctgccttagtgacg
aggttacaggacagattcagggctcaggtgggaacagttctgcccagccttatcgatcga
ttaggagatgccaaagaccaagttagagaacaagaccaaagtctgctgctaaagatcatg
gaacaagctgcctctccacagtacgtctgggaccggatgttaggaggcttcaaacataaa
aacaacagaaccagagaaggagtgtgcctttgtctcatcaccacactgaacacatatgga
gctcaaggcttgaccttaagtaaaatagttcctcatatatgtaacctgctgggagaccca
actagtcaggttcgagacggagcaatcagctgtttggtggagatctacagacacgtggga
gagagggtgaggctggacctcagcaagaaaggcattccccagtcaaggttaaatgtaatc
ttcagcagatttgatgaagtccaaagatccgggaacatgatcccatcctcgggctcagat
aagaactttgaggatgaagactctgtggatggaggcaggtcctcctcctcctcgtcctcc
aaagtgccccctggtggacggaggactgtgatgagctctgctagaagacccagttcagct
tcttctaccaagtccacaggtaaagaagcagctgctggagctgtcgatgaagaagatttc
atgaaagcctttgaagacgtgccctcggtgcagatctactccaacagagagttggaggac
cagctgacgaagatccgagaggttctgtctgacgataaacacgactgggagcaccgggtg
gtcgcgctgaaaaaggttcgttctcttatgttggccggagctgctgagtatgaaggtttc
cctcagcagctgcgcctcctggaggccgcattcaagctgtccgccaaggatctgaggtct
caggtggtccgagaggcctgcatcaccctgggacacctgtcctcgctgctgcggaacaag
ttcgaccacggagcggagagcgtcatgcccactctgctgaacctcgtgcccaacagtgcc
aaagtcatggccacatcaggaatggctgctattcgcctcattctcaggcacacacactac
ccccgcctcatccccatcatcaccagtaactgcacctccaaatcagtggcagtcagacga
cgctgttatgagttcctcgatctgatgctgcaggagtggcaaacaaacacactggagaga
cacgtcgccgttctgacagagaccatcaagaaagggatccatgatgctgactccgaggcc
cgatccatcgccagaaagtgctactggggttttcatggtcactacagccgggaggcggag
catctgttccaggcgctggagtccacctatcagaaggctctgcagtcgtacctgaagagt
tcggacagcattgtgtctctgcctcagtcggatcgctcgtcttcgtcctcacaggagagt
ctaaaccgaccgttaccggtgaagagcgtcatcagcgggagcataaccagaagtaaactg
gtgggtaccagggtctccacaacaccgggctctctccagcgctcccgcagtgacatcgac
gtgaacgccgcctccagtgccaagtcgcgcctgtccactgtccccgcctcctcgcccttc
agctccgcgtccaccctccctccggggtcgtacgcctcgttagatggcactgctggtaaa
agtgatggtcgtgttcgtactagaagacaaagctcaggcagtgtgggcggggccagtccg
tctgtggtggacagcagggggcggagtcgagccaaagtggtgtcccagtcccagcgatcc
agatcagccaatcccatcagtgccgggagtcgatccagttctccagggaagctgctggga
agcggctacggtcggatcccccgagccacggtgtctgtctccaacacgcccacagacaaa
cgcagcagaattccacggagccagggctgcagccgggagaccagtcccaaccgcctgggc
ctggcccggagccgcattccccgtcccagcatgagtcagggttgcagccgcgacacgagt
cgcgagagcagccgtgacaccagccctgctcggggcttcgctcctctggcctcccgacgt
cactcccgctccaccagcgctctctccacagcagacccccacagccagtcagaccgttac
ggtttgatccaccaggccaggatttcagcgtcagttaacgccatgagggttctgaacacc
ggcaccgaggtggaggcggcggtggccgatgctttgctgttaggagactccaggaataag
aggaagccgttgaggcgtcggtacgaatctcctgggatgtactctgatgacgacgccaac
agcgacgcctccagcgcctgctcggagcgctcctacagctcacgaaacggaggaatccct
cactacctgcgtcagacagaggacgtggccgaggtcctgaatcactgcgccagctccaac
tggtctgagaggaaggagggcctgctgggtctgcagaacctcctcaagagccaaagaata
ctcagccgagtggagttgaagagactctgtgagatcttcaccagaatgtttgcagatcct
cacagtaagagagtgttcagcatgttcctggagactctagtggacttcatcactgtgcac
agagaggacctgcaggactggctctttgtactgctcactcagctgcttaagaaaatgggt
gcagatctgctgggctccgtccaggccaaagtccagaaggccctggatatcaccagggag
tcttttccatttgaccaacagtttaacatcttgatgaggtttattgtggaccaaactcag
actccaaatctcaaggtgaaggtggccattttgaaatacattgagtctctggctcagcag
atggacccagcagacttcgttaactccagcgagacgcgacttgctgtgtcccggatcatc
acttggaccactgagcctaaaagttctgacgtcagaaagacccttcataactgggtgagc
gaggagctggctggcaggtccagctctgcagcccttctgaccacagagagcaaccaggaa
gaaaggtgtaagcaggcagcccaggtggttctgatctccttgtttgagctcaacacacca
gagttcaccatgctgctgggagctctgcccaaaaccttccaggacggagccaccaagctg
cttcacagccacctgaagaactccagcaacaccagcagcaacatggggtctcccagtaac
accatcggccggacgccatcacgccacacccccagcagaaccagtcccctcacctcacct
acaaactgttcccatggcggtctgtctccaagtcggttatggggttgggggatcgacggg
ctgtccaagcacccccctgcccctcctccaccccctccacctcactccacccctgctgcc
ccctccctaagggtcctgcgcagagcgtattcacccagcatgatggagtacgacacagag
aacatgaactcggaggagatctacagctcactgcgaggagtcacggaggccatccagagc
tttagctaccggagccaggaggacctgaacgagccggtcagacgggagggaaagagggat
gatggcgcggggagagaaggagtagcctcgtctcctggttctgattcccgcgtgggttta
gaaatggttgaaggcggtcgcacggctttggacaacaagacgtccctgctgaacacgccg
tccccacgctccttctctggaccacggagtcgagagttttccccgtacggatatggagaa
accatctgcacctacgacaagagcgccctgaaggaggccgtgttcgatgacgacgtggag
cagttcagagactgccggcggcaggaaagtggagaaaaccagatggccccccctaaaggc
ttttctcctgtcggctcggacctggtagccgacctgctgaaggagctgtctaatcacaat
gagcgttctgaggagcgtaaaggagccctggtggagctgctgaagatcaccagagaggac
aacacggcggtttgggacgagcactttaaaaccatcctgctgctgctgctggagacgctg
tgtgacaaagaccacaccatccgagctctggctttacgcgtgctgaaggagatcctgagg
aaccagccggcccggtttaaaaactacgctgagctcaccatcatgaagactctggaggcc
cacaaagattcccacaaggaggtggtgcgagcggcggaggaggcggcgtccacgctggcc
gggtccatccacccggagcagtgcatcaaggttctgtgtcctatcgtccaaacggccgac
tatcccatcaacctggctgccatcaagatgcaaaccaaagtcatcgagcgcatcaccaag
gagtctttactccagctgcttcccgacatcatcccaggacttctgcagggctacgacaac
acagagagcagcgttcgcaaggccagcgtgttctgtttggtcgccatctactctgtcatt
ggtgaggagctcaaaccccacctggcccagctcacgggcagcaagatgaagttgttgaac
ctttacatcaaacgagcccagaccaccaacagcaacagcagcagctcctcagatgtttcc
tctcacagttaa
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integrated database retrieval system
