Nothobranchius furzeri (turquoise killifish): 107382790
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Entry
107382790 CDS
T05163
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107382790 (trpc1)
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107382790 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
107382790
NCBI-ProteinID:
XP_015810580
UniProt:
A0A1A8AK79
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Position
sgr08:complement(40516492..40527898)
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AA seq
796 aa
AA seq
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MHISAWPYSLSVVMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNVNCVDVLGRDAVTIAIENENLDILQLLLEYGCQTTDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECMLCNAKNKKDSLRHSRFRLDIYRCLSSPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYDELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKMGTVSSVALLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYMTFLLLLNLYCLVYNEQKKNLMGPALEM
IDYLLILWILGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKIVAHSKFCE
KVLERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKFL
GLFLLVLFSFTIGLTQLYGKDLKDPNTNTTNKDCEGIFCQQQSNDAFHTFMGTCYALFWY
IFSLAHVALFVTRISYTEELRSFVGALIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTICYLVTSLRKWICSHTSKGKVKRQNSL
KEWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSMDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgcttggccgtactcgctctccgtcgtcatggcagctctgtaccagggt
acggacgcctcctctccggacaaattcctggccctgaaagacgtgagggaagttaaggag
gaaacgacgctggatgagaagctcttcctcctggcatgcgagaagggtgactactacatg
gtgaagaagctgcttgaggagaaccgacacggcgagctcaacgtcaactgcgtggatgtt
ctgggaagagatgcggtgaccatcgccatcgagaacgagaatctagacatcctgcagctt
cttcttgagtatggttgccagacaacagatgccttgttggtagccatagactcagaggtg
gtgggagctgtggacatccttctcaaccacagaccgaggcgatcctcaaagccgtctatc
gcaaaactaatgcagcggattcagaacccagagtattccaccaccatggacgtggctcca
gtcatcctggcagcacacaggaacaactacgagatcctgacgatgctgctgaagcaggac
atctcgcttccccggccacatgcagttggctgtgaatgcatgctatgcaatgctaaaaac
aagaaggacagcttaagacactccaggttccgcctggacatctaccgctgcttgtcgagt
ccttccctcatcatgctgaccgaggaggatcctattctcagagcgtttgagctcagtgca
gacctaaaggagctcagcctggtggaggtggagttcaggaacgactatgacgagctggcc
aagcagtgcaagatgtttgccaaggatctgctggctcaggctcggaactcccgggagctg
gaggtgatccttaatcacacctctagcgaggatcatgttgataagagaggcctgctggag
gagcgcatgaaccttagccggcttaaactggccatcaagtacaaccagaaagagtttgtg
gcccagtccaactgtcagcagttcctcaacaccgtctggtttggagaaatggccagctac
cggcgcaaacacacctgcctgaagatgggcacggtttccagcgtggcgctgctctggccg
ctgctctccgtctgctaccttctggtgccgcgctctcgagtcggccagatcatccacaca
ccgttcgtcaagttcatcatccacagcgcctcctacatgaccttcctgctgctgctcaac
ctttactgtttggtgtacaacgagcaaaagaaaaacctgatgggcccggcgctggagatg
atcgactacctcctgatcctctggatcctaggaatggtgtggtccgacgtgaagcgtctg
tggtacgaagggctggaggacttcctggaagagtcgaggaaccagctgagctttgtgatg
aactcgctttacctggccaccttcgctctcaagatagtcgctcacagcaagttctgtgag
aaggtactagagaggaagaactgggacgccttccatcccatcctggtggctgaaggactc
tttgcttttgctaatgttctgagttacctgcgactgttcttcatgtacaccaccagctcc
attctggggccgctacagatctccatgggtcagatgctgcaggagtttgggaaattcctg
ggcctcttcctgctggtgctgttctccttcactatcgggctcacccagctctacgggaaa
gacctcaaagacccgaacacaaacacaacaaacaaggactgcgagggcatcttctgtcag
cagcagagcaacgatgcgttccacacgtttatggggacctgctacgctctattctggtac
atcttctccttggctcacgttgcgctcttcgtcacccggatcagctacacagaggagctg
cgctcctttgtcggagccttgatcatcggcacatacaacattgtggtggttattgtgctg
accaagctgctggtggccatgctgcataaaagcttcagacaaatcgctaaccacgaggat
aaagagtggaagtttgcccgagccaaactgtggctcagctacttcgacgacaaatgtact
ctgcctccaccttttaacatcctcccttcgcccaaaaccatctgttacctggtgaccagt
ttgaggaagtggatctgttcacacacatctaaaggcaaagtgaagaggcaaaacagcctc
aaggagtggaggaacctgaagcagaagcgtgacgagaactaccagaagatcatgtgctgc
ctggttcaccgttacctgacctccacgaggcagaagatgcagagcatggaccaggccacc
gtggagaatctcaacgacctgcgccaagacctgtccaagtttcgcaacgagatgagggac
ctactgggcttccgtacatccaaatacgccatgttctacccgaggagctaa
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