Nothobranchius furzeri (turquoise killifish): 107382860
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Entry
107382860 CDS
T05163
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6 isoform X1
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107382860 (rnf6)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107382860 (rnf6)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107382860 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING-like
Prok-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
107382860
NCBI-ProteinID:
XP_015810685
UniProt:
A0A9D3BN39
LinkDB
All DBs
Position
sgr08:complement(42966345..42971715)
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AA seq
733 aa
AA seq
DB search
MLVPLVPSWVVRALSMVMDPPGGGDERQRQAERLRREEAYYHFINELSEEEYRLMRDSNL
LGTPGEVTAEELRQRLDGAKERVLSQPGTEQRSQTADAGEQQSSSSGGEERGAGGRGGAG
NTEPGAEPSNGDSLLEWLNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININ
HDQPEPGEHNDGVNTADTAELTPSNTTAPSTRTAFSLSSSRPSAAPRSAPYPSPRPAISR
RMETRRTRSSTTTPPVSLHVPPPPEISGQRRVNTLHSSAPLSVVPSSLVDQTTPSQRPLL
HVEVEQRQDGMSTPPDCPQVSLQSESQAPPVEHESRSSRTRSRGRARRATTGSGVSSRVS
RRSRSPLHRTPVPSTAPSSSSVPIGFAVHTQPASVTTSVSMETGETVSEPAALTETAVET
VELERDSHVTGAGGSAVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAENTVTF
ESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTGFGEL
SSLMETEANSESVPPSHADVGSTNSNSNPTGRLHSNENVSGQDGTGEVVQEREGLAGNED
EQSGQARLGGGVVSSTDGRVNSRDTNNLVENGTLPILRLAHFFLLNDEDDDEHPRGLTKE
QIDNLSTRTYGQASLEGEMGRACSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTC
PICRQPILATLHD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtaccgctggtcccatcttgggttgtgagagcactctccatggtgatggaccct
cctggtgggggagatgaacgccagaggcaggcagagcgtcttcgacgggaggaggcatac
tatcacttcataaatgaactgagtgaggaagagtaccgtctcatgagagacagcaacctg
ctgggcaccccaggggaggttactgcagaggagctgcgacagcgtctggatggagcaaaa
gagcgtgtgttgtctcagcccggcactgagcaacgctcacagactgctgacgctggagaa
caacagagcagtagcagcgggggagaggagagaggtgctggaggaagaggaggggcaggg
aacacagaacctggagcagaaccttctaatggcgattcattactggagtggctcaacact
ttcagacgtactggtaatgccacccggagtggacagagcggcaaccagacatggcgggct
gttagccggaccaaccccaacagtggggaatttcgttttagcttagagatcaacataaac
cacgatcaacctgagcctggagagcataatgacggtgtgaacaccgcagatactgcagag
ctgactccttcaaacacaacagcaccctctacacgcactgctttctcactctccagctct
cgcccttcagctgcaccaaggtcagccccatatccttccccccgtcctgccatcagtagg
aggatggagactcgacgtacacgtagcagcactaccactcctcctgttagcctccatgtg
ccgccacctccagagatttctggtcaaaggagggtcaacactttgcactcttccgcacct
ttgtctgttgtccccagttctcttgttgatcaaaccacaccttcccagcgtccgctcctg
catgtagaggtggagcaaaggcaggatggaatgtctactcctccagactgtcctcaggtg
tcactccaatctgaatcacaggccccacctgtggaacacgaatcacgcagcagtaggact
cgatcgcgtggtcgtgcccgtagggctacaacagggagtggagtttcatctcgtgtgtct
agaagaagtcgttctcctttgcacagaacacctgttccaagtactgcaccatcctccagc
agcgtcccaattggttttgctgtccacactcagccagccagtgtaacaacctcggtgtcg
atggagactggggagaccgtgtcagaacctgctgctctaaccgagacggctgtggagact
gtggagcttgagagggattcacacgtcacaggagctggaggttcagcagtgagacgccac
cccaccatcatgctggacctgcaggtgagaaggattcgacctggcgagaaccgagatcgg
gacagcatcgctagcagaacgcgttctcgcgctcgtgttgccgagaataccgtcacgttt
gaaagcgacagtggagggtttaggcgcaccatctctcgatctgagcgagctgggattcgc
acttatgtgagcactattcggattccgctgaggcgcatcagtgagacgggccttggagaa
ccgaactctactgccctacgctcgatcctgcgccagatcatgactgggtttggagagctt
agttctcttatggaaacggaggctaattctgaatctgttccacctagccacgctgatgtt
ggcagtacaaatagcaattccaacccaaccggtcgtctacattcaaatgagaatgtgtct
ggccaggatggtaccggggaggtagttcaggagagggaaggactggcgggaaatgaggat
gagcaaagtgggcaagccagacttgggggtggggtagtaagtagcactgatggacgggtt
aacagtagagacaccaacaacctggtagaaaatggcaccctacccattctgcggctggcg
cacttctttttgctcaacgacgaagacgacgacgaacatccgaggggcctgaccaaagaa
cagattgacaatctgtcgacgcgtacgtatggtcaggccagcctggaaggtgagatgggt
cgtgcgtgcagcgtgtgcatcaacgaatatgctcaagggaacaagctgcgccgcctgccc
tgctcccacgagttccacatccattgcatcgaccgctggctctccgaaaacaacacctgc
cccatctgcaggcagcctatactcgccacgcttcacgactga
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