Nothobranchius furzeri (turquoise killifish): 107382897
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Entry
107382897 CDS
T05163
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107382897 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107382897 (arfgef1)
Membrane trafficking [BR:
nfu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
107382897 (arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
107382897
NCBI-ProteinID:
XP_015810725
UniProt:
A0A8C6L7Q5
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All DBs
Position
sgr08:complement(43777311..43839746)
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AA seq
1941 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPSGDGKS
SSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDST
APGKKLIDRIIETICACFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKLSWSLASRKRDRQLQEAKQMER
DRHRQHSPVTQPAEPESPQLQTHVHSSAKAPTQEANGPVSPPTPGTTCPSTPSTPSTPAP
ESNSRSVSGEQEGLVYENPDPENGSEFCVAENEQTEADQATAAAQNAASKQHEGARKEEE
EEEEESPNYEEKAQEIVQSILQEVVNTVAGGHCLDPANLCSDTQESAADSQPAMAGTEGT
QSSLEDEGTVGSDSEHVHANGIPGTPISASFTPSLPDDRLSVSSTDTQESGATPGQLPGA
KFSHILQKDAFLVFRSLCKLSMKPLSEGPPDPKSHELRSKVLSLQLLLSILQNAGPIFKT
NEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSHFKTHLKMQIEVFFKEIFLY
ILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGR
GGHELGTTPQQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSLGQEKPSEQESTET
KASETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKP
KRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRFNKEVMYAYVDQMDFQ
GKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIM
LTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAGKKIAMKETKELTMK
SNKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTP
FLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTASSGI
SEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKARYISGTVRG
REGFITSTKEQSSDEYLGLVGGTVDRKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDG
NAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNK
VGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRSPTIRDMVV
RCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTNVFEKHFAATI
DSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSERPQAFKDYTSDDMNVAPEDRV
WVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKHWWQDLFRIVFRIFDN
MKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLDGLLLDDILAQLYWCVQQDNEQLA
RSGTNCLENVVILNGEKFSLETWDKTCNCILDIFKTTIPHTLLTWRPAGAEGEPFTSHGL
SDKQLDSISQKSLDIQSRSEDQNSISSADRAAVDARRQSQHSTASGLSEDVSRNRNPTKI
QEQRLFSALLIKCVVQLELIQTIDNIVFFPATSKKEDAENFAAAQRDAAGVAGVRVETQD
QGMYHYLTSEQLFKLLDCLLESHCFAKAFNSNNDQRTLLWKAGFKGKSKPNLLKQETSSL
ACGLRILFRMYTDERRRDAWEEVQRRLLNVCSEAVSYFLALTSESHREAWTNLLLLFLTK
VLKISDERFKAHASRYYPLLCEIMQFDLIPELRAVLRKFYLRIGVVFHIAQLPEPEAHPD
RGRAEPETDTEVGEEAGEEAQ
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaagggaaaaaaacgaaaaacatgttcctgacaagagctttggaaaagatcctg
gccgacaaggaggtgaaaaaggctcaccattcccagctgcgcaaagcctgtgaggtggca
ctggaggaaatcaaggaggaatcggaaaaattaagtccgcccagcggagatggcaaatcc
agctccagcactttaccaccaatcaaatcaaaaaccaacttcatcgaagccgacaagtac
ttcttgccatttgagctggcgtgtcagtccaaatgtccccgcatcgtcatcacctcactc
gactgtttacagaagctgatagcgtacggccacctgactggcagcgccccggacagcact
gctccgggcaagaagctcatcgacaggatcatcgagaccatctgtgcttgttttcaagga
ccgcagaccgatgagggtgtacagctacagattattaaggccctgttgacggccgtgacc
tcccagcacatagaaatccacgaaggtacggtgctgcaggctgtccgcacctgctacaac
atctacctggccagcaagaacctcatcaaccagacgacggcgaaggccacgctcacacag
atgctcaacgtcattttcgcgcgcatggagaatcaagcacttacaaatcacaagctatct
tggtctctggcctccagaaagcgtgaccgccagctgcaggaagccaaacagatggagaga
gatcggcaccggcagcactccccagtcacccagcccgctgagccagaatccccccagctc
cagacccacgtccactcatctgcaaaggctcccacgcaggaggccaacgggcccgtcagc
cctcccacccccggcaccacctgcccgtccaccccatccaccccgtcgacgcccgcccct
gagtccaacagcaggtctgtgtccggggagcaggaggggctcgtctacgagaacccggac
cctgaaaatgggtcggagttctgcgtggctgaaaatgagcaaacggaggcggaccaagcc
accgcagcagcacagaatgctgcatccaaacagcacgaaggagcgcgtaaagaggaagag
gaggaggaggaggaaagcccaaactacgaggagaaagcccaggaaatagtccagagtatc
ctgcaggaggtggtcaacactgttgcaggaggccactgtctggatcctgcaaacctctgc
tccgacacccaggagtccgccgcggattcgcagcccgccatggcggggaccgagggaacc
caaagctcgctggaggacgagggcaccgtggggagtgacagcgagcacgtccatgccaat
ggcattcctggaactccgatttctgccagcttcacgccctcgttacccgatgacagactc
tccgtctcctccacagacactcaggaatcgggggcgacaccaggacagctaccgggcgcc
aagttctcccacatcctgcagaaagacgctttcctcgtctttcgctcgctctgcaagctg
tccatgaagccgctttcagaaggaccgcctgatcccaagtctcatgaactgcgatcgaag
gttttgtcacttcagcttctactatccatcctgcagaacgccgggcctatcttcaaaaca
aacgagatgttcatcaacgccatcaaacagtacctgtgcgtggctctgtccaagaacggc
gtctcttctgtgcctgaggtctttgagctctcactctccatttttctcactctgctgtct
cacttcaagacgcacctcaagatgcaaatcgaggtgttcttcaaagagattttcttgtat
attcttgagacgtccaccagctcttacgaccacaagtggatggtcatacagaccctcacc
agaatatgtgcagatgcccaaagtgtggtggacatctacgtgaactacgattgtgacttg
aatgctgctaacatttttgaacgattagtcaacgacctctcaaaaatcgctcagggccgc
ggcggccacgagctcggcacgacgccccaacaggagctgactctgagaaagaaaggcctt
gaatgtctcgtttccattctgaaatgtatggtggaatggagcaaagaccagtacgtcaac
ccaaactcccagaccagccttggccaggagaagccttcagagcaggagagcaccgagacg
aaggcctcagagaccataaaccgctatggcagcatcaactctttggactccacagcttca
tctggaatcggcagctacagcacgcagatgtccggcaccgacaaccccgagcagtttgaa
gtcctcaagcagcagaaggagatcattgaacaggggatcgacctgttcaacaagaaacca
aagagaggaatccagtatcttcaagagcaaggcatgctgggtacaactccagaggacctt
gctcagtttttgcaccaggaggagcggcttgactcgactcaggtgggagaatttctcggg
gataatgaccgcttcaataaggaggtgatgtacgcctacgtggaccagatggacttccag
ggaaaggactttgtgtctgcactgaggatgttcctggagggctttcggctcccgggcgaa
gcccagaagatcgaccggctcatggagaaatttgcagcgagatatctggaatgcaaccag
gggcaaactctttttgccagtgcggacaccgcgtatgttcttgcctactccatcatcatg
ttgacaacagacctccacagtccccaggtcaaaaacaaaatgacaaaagagcaatacatc
aagatgaatcgaggcatcaatgacagcaaagacctgcctgaggaatatttgtcggccatt
tatgacgagatcgccgggaagaagatcgccatgaaggagacgaaagagctcaccatgaaa
tccaacaagcagagcgtggcgagcgagaagcagaggcgtctgctttacaacgtggagatg
gagcagatggccaagacggccaaagctttgatggaggccgtcagccacgttcaggctccc
ttcaccagcgccacacatctggagcacgtcaggcccatgttcaagctggcgtggactccc
ttccttgctgccttcagcgtgggcctgcaggactgtgacgacaccgaagtggcctctctg
tgtctagaagggatccgctgcgccatcaggatagcgtgcatcttctccatacagttggag
agggatgcgtacgtgcaggctctggcgaggttcaccctgctcacagccagctcgggcatc
tcagaaatgaagcagaagaacatcgacaccatcaagacgctcatcactgtggcgcacacc
gacggcaactacctgggcaactcctggcacgagatccttaagtgcatcagtcagctggag
ctggctcagctgattggcaccggggtgaaggcgcgctacatctcaggcacggtccggggc
agggagggcttcataacgagcacgaaggagcagagcagcgacgagtacttgggtttagtt
ggaggaactgtggaccgtaagcagatcgccagcattcaggagtccatcggcgagacaagc
tctcagagtgtggtggttgctgtggacaggatttttacaggttccaccagattagatggg
aacgccattgtggattttgtgcgctggctgtgtgccgtgtccatggatgagctggcctcg
cccacacatccacgcatgtttagcctgcagaagatagtggagatctcttactacaacatg
ggtcgcatcaggctgcagtggtccaggatctgggaggtcatcggggaccactttaacaag
gtcggctgtaatcccaatgaagacgtcgccatttttgccgtggattctctcaggcagctg
tccatgaagttcctggagaaaggggaactggccaacttccgcttccagaaggattttctg
aggccttttgagcacatcatgaaaaagaataggtctcccaccatcagagacatggtggtg
cgctgcatcgcccagatggtcaactcccaggcggcgaacatccgctcaggatggaagaac
atcttctctgtctttcacctggctgcatctgaccaggatgagagcatcgtggagctggcc
ttccagaccaccgggcatatcgtcacgaatgtatttgagaagcactttgccgccacgatc
gactccttccaggatgcggtcaagtgtctgtccgagttcgcctgcaacgcctcgtttccc
gacaccagcatggaggccatccgcctcatccgccactgtgccaaatatgtctcggagagg
ccgcaggcctttaaggattacaccagtgatgacatgaatgtagctcctgaggaccgggtg
tgggtgcgggggtggttccccatcctctttgagctctcctgcatcatcaacagatgtaaa
ctggatgtcaggaccagggggctcacggtgatgtttgaagtgatgaagacctacgggcac
acctttgagaaacactggtggcaggatctgttcagaatcgtcttcaggatctttgacaac
atgaagctacctgagcaacaaactgagaaagcagaatggatgaccaccacatgcaaccac
gcactttacgccatctgtgatgtcttcacccagtactttgagtcgctcgacggcctcctg
ttggacgacatcttggctcagctctactggtgtgtgcagcaagataacgagcaacttgcc
cgttcgggcaccaactgcctggagaacgtggtcatcctgaacggggagaagttctccctg
gagacctgggacaagacctgcaactgcattctggacatcttcaagaccacaatcccacac
acgctgttgacatggagaccagctggagcagaaggagagcccttcacatcacacggcttg
tccgacaaacagctggactctatttctcagaagtctttggacatccagtcccgctctgaa
gaccagaactccatcagcagcgccgacagagctgctgtggacgcccggcggcagagccag
cacagcacggcgtcgggtctgtctgaggacgtctccaggaacaggaatccaaccaagatc
caggagcagcgtttgttctcggcgctgctgataaagtgcgtggtgcagctggagctgatc
cagaccatcgataacatcgtgttcttccccgccaccagtaagaaggaagatgcggagaac
tttgctgctgctcagcgggatgcggcgggcgtggcgggcgttcgggtggagacccaggac
caggggatgtaccactatctaacctcagagcagctttttaagctgctggactgcctgctc
gagtctcactgcttcgccaaggctttcaactccaacaacgaccagaggaccttgctgtgg
aaagcaggtttcaagggaaagtccaagcccaacctgctgaagcaggagaccagcagcctg
gcgtgtgggctgcggattctgttccgtatgtacacggacgagaggcggcgggacgcctgg
gaggaggtccagagacgactgctcaacgtgtgcagcgaagccgtctcgtacttcctggct
ctgacgtcagaaagccacagagaagcctggaccaatctgctgctgctcttcctcaccaag
gtgctgaagatcagcgacgagaggttcaaggcccacgcgtccaggtactaccccctcctg
tgtgagatcatgcagttcgacctgatccccgagctccgggccgtgctgaggaagttctac
ctgcgcatcggcgtcgtctttcacatcgcacagctgcctgaacctgaagcccaccccgat
cgggggcgggcggagccagaaacggacacggaggtgggggaggaggcaggggaggaggct
caatga
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integrated database retrieval system
