Nothobranchius furzeri (turquoise killifish): 107382933
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Entry
107382933 CDS
T05163
Symbol
rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nfu03037
]
107382933 (rttn)
Cilium and associated proteins [BR:
nfu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107382933 (rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
VMAP-M18
RNA_helicase_helical
Motif
Other DBs
NCBI-GeneID:
107382933
NCBI-ProteinID:
XP_015810777
UniProt:
A0A1A7ZNI9
LinkDB
All DBs
Position
sgr08:complement(45597524..45656968)
Genome browser
AA seq
2238 aa
AA seq
DB search
MELSPLIKKIGHSLVEIRVRALKSILCKLDLSLISVDDIVQEKMLFVYLLEWFNFPEVPM
KEEVLELLSTLSKNPGAAQMLRDVGAVDFLTQLSPTMEPRLRAVIDGALDQLFQLPELLP
SQSAVYSHGPRSTTTTAPTIVSPEDNLPKMGYFRKNTDSSRDVPPQKIAVHESVRCLKFS
VFPWLTLTNTDRHILSSNESSLRSSNPNLVRTTCELLCDVILHDFPAEIFLQRPGIVQNL
LSLLRLALGSGEASYLHSPAVSCLRQLCVGLRRRLRFHQDPGFYSAKQDLASQNSSFSYA
HDVLGNQRSQTSSPGAERSLRPSVVGHAGQRARGDGQDGDAASNSGSSHGGGATAQAPGE
MPHSPADAAQLELPDLGVEDIMELQFQQLTVAQFTVATMHHAIPLLQTEGLRAFHRVLEL
LCDAVLLLGDSVCELVWDDGSLVGMELKEKLQACMELLGDILSYHQNCSAEVPHCSQIHH
RMAYTGTAIFTVKLLQTVLPPEKANDNLPENTATALFHLCLDASLGNLLPSMQETAVAYL
EQVNSDRHDTYRRVIRAATWMESTCNFLKEVKAEGEKNWLELLELADQAIDGLPFHKHLP
IIKECIHMVSYLWKFDQPSPLLQTESQKLFLKLLSHPSPPVKMETYQCTLNLVKDCLGIH
NLPQQKQAACARVHFLLHHRVLYEISTFGLQDSAEKVNAAAKDILLFLLKGRLMMTASAW
DRFNEALYLVVPILQGYASTEESLGKCVLLISDMSDVAGDDVPTSTAKLKAALRLLFTKQ
PTVRVAAVQQVLPHLTSSGDAKTSRPDVDQSVIASLPDLFCLRNPVDVTLDTRKSILKVE
SVEKLFSILHTDTSDVSLRRSAAEQLCVVLQDTTMHPVLKNLGLPDEVLSLITECVSGNE
SFDCLLESCVCILRKLVYADPSLRRSLAQRSPPLLALLRASLILKENQGNGSEAAVLMSL
LLFDEIASIQMWSDKSATDVTHPPFSLPLTAVRRYNIPFQAATHHAISPYCCVLAPSADL
LTLSPTLRALQVAWNTAWHSGMDNLLEKLNSEAGDPEFHPDLQLSESQLVSMQASHLPYA
LQDCIRAIATAAGHRSVASALSRLSLYLLFDRLARPHVSPHSCRDVLHSLSWQAALTRFV
QVRPACVEDERLLVGIVTLLNTYFKHIPTETVCEAEDGDLRWILELLLNQETAALLHLLL
GVEAQSSPRSPGEPEELKNHIRQRLQRELTGFFNTLLHRLSHTADRLCLAPAGPFRSQLA
VRLLQSLRVSDAPRFYGLPSLERTLQGMVSLTAQPGWSSHCPDLEPSSLCSKYLSGLLEV
ISSFYVEWRGNSSSFMGKGVTKNAVICLLHLSHEMMAVNKNKDFISQWSLGNEGTMEESG
SSQLGLAWLIPLWVDRDQEVRFASLGLGAALTSVPSGCQALCASCQNISGGLWGTLLNIL
LDQQESSMVRREAAFILQNLLLMPMPANAEEAKDSHWQHPCVHDEVSGVSVVGLPALQAL
LYHCQYFQNVAHAASSCYRGRYTFQLRPGPAGSTGPSLQESSSSDSENSLLLWRWDPPPS
VNSRRPSSSLSTSSTVLSTAPIRRLRPNTPKVPSPVGIADDAPAASRLMAQGQSDGDTSN
SSQDSQQEEPSAVQPVVMVTPDLLTAHCSLLTNLLAILPDFTLTAIRQNQLLQVLASLVN
IESVEKCLTELRSPSILPGDREDIKRQLVTALRFLSSFSKLLQFCVMASKELIGQMDFLK
QLNLLAVVMLDTKGLDAGTRDVFHACWTDVFMLLATLLRRDSSAAHPSVSSMLGRRWRTF
AGTISECVNEKFADHLLHTATLQFLSTVFTEETKRRSVEVTNSTSKRDSGLSEILNGASA
SQLCELLLQSFERRTSQDPLKKLTARAMMTLLACSPTAQNYAAKVGLIDSCVEQLRQTQS
QLHLESLRPGRTSHRRKEGGCLKEVRLAAEMLQSTLYNNNECKVAATDARLTPTLHALWP
WLLLDDPTMEVVLELLCVYTANCPPACSSLCSSVPGGVPGSKGSLMHSVMKLTSLTADCS
AVQSLAFSLLVNLTVSRDCRCILQKNNFLQAFLLVPVPKAAGAKATSGATSPLSLWLRLL
VSLSSTEDGQQSILKVTGALELLADLAPHRRHALLTLHNLCFCPANKSHVISNENSIKVL
MSCLESREMETCCMGASALWALLHNNQRAKTALKCPSVRLKIKEALSTFKTDAEKKQDPL
SVYLRKCLEQLSLLLLNV
NT seq
6717 nt
NT seq
+upstream
nt +downstream
nt
atggaattatctccgcttataaagaaaataggtcactctttggtggagattagagttcga
gcattgaaaagcatcttatgtaagctggatctgtctcttatctctgttgatgacatcgtc
caagaaaagatgctgttcgtgtatctgctggagtggttcaatttcccagaagtgccaatg
aaggaggaagtcctggagctgctttcaactttatcaaagaaccccggtgcagcccagatg
ctgagagatgtaggggcggtggactttctcactcagttatctcctaccatggagcccaga
ctgcgagctgtcatcgatggagctctagaccagctgttccagcttcccgagcttctcccc
agtcagtcagctgtctactcacatggaccccgcagcacaactacaacagccccaacgatt
gtttcaccagaggataatttgcctaaaatgggttatttccgcaagaacacggacagcagc
agagacgtaccacctcagaagatcgcagtacatgaatctgtgagatgcctgaagttttct
gtgtttccgtggctgactttgacaaacacagacaggcacatactttcctctaatgagagc
tctctgaggagcagcaatcccaacctggtgagaaccacttgtgaacttctatgtgacgtc
attctgcacgattttcctgctgagatcttcctgcagaggcctggcattgtgcagaacctt
ctgtctctgctgcggctggctttgggaagcggtgaggcgagttacctccactcgcccgcc
gtttcctgcctgcggcagctttgcgttgggctcaggaggaggctgcgctttcatcaagat
ccaggcttctactctgcaaagcaagatctagcttcacagaactcgtccttttcttacgcc
catgacgttttggggaaccagcgttcccagacgtcctcccccggggccgagcgctctctc
cggccttcggtggtgggacacgcaggccagagagccaggggagatggccaagatggagat
gcagcctccaacagtggcagctcacacggaggcggggcaacggcccaggcccccggggag
atgccacattcacctgcagatgcggcgcagttggagcttcctgatctaggagtagaagac
attatggagctgcagttccagcagctcacggtggcccagttcactgttgctaccatgcat
cacgctatacctctgcttcagacagaaggcttgcgtgcgttccaccgtgttctggagctg
ctgtgcgatgccgtgctcctgctcggggacagcgtttgcgagctggtctgggacgacggc
agcctggtggggatggagctgaaggagaagctacaagcctgcatggagctgctgggggat
attctcagctatcatcagaactgctcagcagaggttccccactgttcccaaattcatcac
agaatggcgtatacaggcactgccatttttaccgttaaactcctacagactgtcctccct
ccagaaaaggctaatgataacctcccagaaaacacagcgacagctcttttccacctatgt
ttggatgcatcattgggaaatttattgcccagcatgcaagagaccgcagtggcctacttg
gagcaggtgaactcagaccgccatgacacctacaggagggtgatccgagccgccacgtgg
atggagtcaacttgtaacttcctgaaagaagtgaaagctgaaggggagaagaactggttg
gagttgctggaacttgccgatcaagccatagacggtcttccgtttcacaagcatctgccc
atcatcaaagaatgcatccacatggtctcctacctctggaagttcgatcagcccagtcct
ctgttgcagaccgagagccagaagctcttcctcaagctgctgtctcatccttcaccgcct
gtcaaaatggaaacataccaatgcactttaaacctggtcaaggattgccttggcatccac
aatctgccacaacagaaacaggcagcatgcgccagggtccacttcctcctccaccacaga
gttctctatgaaataagcacctttggactccaggactctgcagaaaaggtgaacgcagct
gccaaggatatcctgctgttcctgctcaaggggcgattgatgatgacagcatcagcctgg
gacagattcaatgaggcactttacctggtcgtacctattttacagggctatgccagcact
gaagagtcacttggaaagtgtgtcctgctgataagcgacatgtcggacgtggcaggagac
gatgttcccacaagtacagccaagctaaaagcagcgctccgactgcttttcaccaaacag
cccactgtaagagtagcagcagtgcagcaagtcctgccccaccttaccagcagtggggat
gcaaaaacttccagaccagacgtggatcaatctgtgattgcatcccttcctgacctcttt
tgcctccgaaatcccgtggacgtcacactcgacacacgcaagtccatcctgaaggtggag
tcggtggagaagctgtttagtatccttcacacagacacgtctgacgtttccctcagaaga
tcggcagcagaacagctgtgtgttgtgctacaagacacaaccatgcatccagtcctgaag
aatcttggtttacctgatgaagtcttgtcgttaatcacagagtgtgtgagtggcaacgag
agctttgattgtcttctggagtcctgtgtttgcatcttgagaaaactggtgtatgccgat
ccctctctgaggcgcagcctggctcagcgcagccctccgctcctcgccctgctcagggca
tcgttgattctgaaggaaaaccaggggaacggaagtgaagcggctgttctcatgagcctg
ctgctctttgatgagatcgccagcattcagatgtggtcagacaaatccgccacagatgtg
acccatccacccttctccttaccgctgacagcagttcgcaggtacaacatccccttccag
gcagcgactcatcatgccattagcccctactgctgtgttctggctccttctgctgacctt
ctgacccttagccccaccctccgagctctgcaggtggcctggaacaccgcatggcattct
gggatggataacctccttgaaaagctgaacagtgaagctggtgatcctgaatttcatccc
gacctgcagctgtcagagtcccagctcgtgtcgatgcaggcatctcacctcccgtatgca
ctgcaggactgcatccgggccatcgccactgcagcggggcacaggtccgtggcctctgcc
ctctccaggctcagcctctacttgttgttcgacaggctggctcgccctcatgtttcacct
cacagctgcagagacgtccttcactccctcagctggcaggcagcactgaccaggtttgtc
caggtgcgcccagcctgtgtcgaggacgaaaggttgctggtgggaattgtgacactcctg
aatacctacttcaaacacattcccactgagactgtgtgtgaagccgaggacggggacctg
cgctggatactggagctgcttctcaaccaggagactgcagctctccttcatctgctcctc
ggtgtggaggcgcagagctcccctcggagcccgggggaaccggaggaactgaagaaccac
atcagacagagactgcagcgggaactcaccggcttctttaacacgctactacaccgactg
tcacacaccgccgacaggctgtgtttggcaccagcgggcccctttaggagccagctggca
gtccgtttgcttcagagcctgcgggtgtctgatgccccacgtttctatggcctccccagc
ctggagaggactctgcagggcatggtgagcctgactgcccagcctggctggagctcccac
tgccctgacctggagcccagctccctctgctccaagtatctcagtggattattggaggtg
atctcctcgttttacgtggagtggagagggaactcctcgtctttcatggggaaaggtgtg
accaagaacgccgtcatctgcctgctgcacttgtctcatgagatgatggctgtgaacaaa
aacaaggacttcatttcccagtggtctttgggaaacgagggaacaatggaggaatctggc
tcctctcagctgggattggcctggctgatccctttgtgggtggaccgggatcaggaggtg
aggtttgccagtttgggtttaggtgcagctctgacttctgtgcccagcgggtgccaggct
ctgtgtgccagctgtcagaacatcagcggaggtctgtggggcacgttgctcaacatcctc
ctggatcagcaggagagcagcatggtccgcagggaggctgcgtttatcttgcagaacttg
ctgctgatgcccatgcctgccaacgcagaggaggccaaggactcccactggcagcatcca
tgtgtccacgacgaggtgtctggtgtgtctgtggtgggtctcccagccttgcaggctctg
ctttaccactgtcagtattttcaaaacgtggctcacgctgcctccagttgctaccgtggc
cggtacacgttccagctccggcctgggcctgctgggagcactggcccctcgctccaggag
agctcttcatctgattctgagaactctctgctattgtggagatgggacccacctcccagc
gtcaactctagacgaccttccagctccctttccacttccagcaccgtgctcagcactgct
ccaatcagacgtctgaggcccaacactcctaaagttccctctccggtgggcatcgcagac
gatgctcccgctgccagtagactgatggctcaaggacagagcgatggagacacaagcaac
tcatcgcaggactcccaacaagaggagccctcagccgtgcagcccgtcgtcatggtaact
cctgacctcttgacagcccactgcagcctgctgaccaatctgctggccatcctgccagat
ttcaccctcactgccatccgacaaaaccagctacttcaggtcctggccagtctggtgaat
atcgagtccgttgagaaatgtctgactgagctgaggtcacccagcatcctccctggggac
cgagaagacatcaagcgtcagctcgtaactgcacttcggttcctgtccagcttttccaaa
ctgctacagttttgtgttatggcgagcaaggagctgattggccagatggacttcctgaaa
cagttgaatctcctggctgtcgttatgctggatactaaaggattagacgcaggaacccgg
gacgtgtttcatgcgtgctggacggacgtgtttatgctcctggctactctgctgaggaga
gacagctcagcagcgcacccgtctgtctcctccatgctggggagacgctggcggacattc
gcaggaacaatatcagagtgtgtgaatgagaagtttgcggaccatcttctccacacggcg
accctgcagttcctctctacagttttcacagaggagacgaagcgccgcagcgtggaagtc
acaaactccacatcaaaacgcgactccggcctgtcagaaatcctgaacggagcctctgcc
agccagctgtgtgaactgttgctgcagagttttgagaggaggacctcccaggacccgttg
aaaaagctcacagccagagcgatgatgacgctgctggcgtgcagccccacagctcaaaac
tacgcagctaaagtcggtctcatcgacagctgtgtggagcagctgaggcagacacaatca
cagctccacctggagtcgctccgacccggcaggacgtctcaccgcagaaaggaaggaggc
tgtttaaaggaagtcaggctggctgcagagatgctgcaaagtactctttataacaacaac
gaatgcaaagtggctgcaacggatgcccgtctaacgccgacgctgcacgctctttggcct
tggctcttgttggacgaccccaccatggaagtggtgctggagcttctgtgtgtttacact
gccaactgcccaccagcatgcagttctctgtgcagcagcgtcccaggtggcgtaccgggt
tctaaaggctctctgatgcactcggtcatgaagctgacctcgcttacggcagactgcagc
gccgttcagagcctcgccttctctctcctggttaacctgaccgtgtcgcgggactgcagg
tgcatcctgcagaagaataatttccttcaagcgtttctgctggtgccggtgcccaaagcg
gccggcgcgaaggccacgtctggcgctacgagccccctgagcctgtggctgaggctgttg
gtcagcctgtcgtccaccgaggacggccagcagagcatccttaaggtgaccggcgctctg
gagctgctggcggacttggcaccacatcgacgacatgcgttgctcacgctccacaacctc
tgcttctgcccggccaacaaatcccacgtcatctccaacgaaaattccatcaaggttttg
atgtcgtgtcttgaaagtagagagatggaaacctgctgtatgggagcatctgccctgtgg
gcgttactccacaacaatcagagggctaaaactgccctgaagtgtccttctgtgcggtta
aaaatcaaagaggccctttccacctttaagacagatgcagagaagaagcaggatcctcta
agtgtttacctgcggaagtgcctggagcagctctccctgctgctgctgaatgtatga
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integrated database retrieval system
