Nothobranchius furzeri (turquoise killifish): 107382942
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Entry
107382942 CDS
T05163
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04217
Necroptosis
nfu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
107382942
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107382942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107382942
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
107382942
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
107382942
Multi subunit type E3
LUBAC complex
107382942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
zf-RING_2
zf-RING_5
IBR_1
Mo-co_dimer
ubiquitin
Motif
Other DBs
NCBI-GeneID:
107382942
NCBI-ProteinID:
XP_015810793
UniProt:
A0A1A8A265
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All DBs
Position
sgr08:complement(46629518..46641118)
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AA seq
702 aa
AA seq
DB search
MSLSSGGWTHSPGLTPDQSTVLPSTSNYETSQAGCQTVLMSVRVSVCHSGIRPLCLPGAV
DESLRLQLSMDPGKSGEFRLSLQNTSGTGRSMTIAEFDLRTVKYEVKSPKCHELMLVAPP
HDRISFNFLCEQEAQEWATVVTSALKEAHRVVPQENDSEQLSIGLHFQSTSTLQKTEDSC
IELSRAIEAGDMKSASVFAAALAHQHAALKIQPSAKDYEDTEINLAVVVEDSSSSCCVTV
KVFPHMTTASLKQQMFLEYGFHPLVQRWIIGQCLCSDQRSLASYGVRQHGDTAYLYLLSA
RHAHLTFQVLQQDQESALLLSPSQSIQNPPLAAKSTNGPSSQDQRSYATLPPSFKDGRSE
RQHIRDLTSLEMPELKEALSLSPSSSQGWACPSCTYINKPTRPGCEICSTNRPESYVIPG
GYQPDALELRRIQREKEAIRQYQQAREEERMENFARLVRMDGHDLIPNPEPVDCRICYVD
LPPGEGVLLRECLHCFCKECLRSVIMLSEEPEVSCPYRDDAYSCAGALQEREIRALVSAE
EYERWLQRSLSVAESRCEGSYHCATADCVGWCVYEDTVNVFHCPVCRKHNCLICKAVHEG
MNCKQYQDDLTARAKNDSAARRTTHLLKTLVQSGEAMHCPQCGIIVQKRDGCDWLRCTVC
HTEICWVTRGPRWGPRGPGDTSGGCRCSVNNQKCHPKCQNCH
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgagttcgggtggttggacccactcccccggcctcacaccggaccagtccacc
gtcctccccagcaccagcaactatgagacctcgcaggccggatgccaaaccgtactcatg
tcagttcgggtgtcggtgtgccattctgggattcggccgctgtgtcttccgggggcagtt
gatgagtcactccgcctgcagctcagcatggacccggggaaatccggggaattccgcctg
tcgctccagaacaccagcgggactggccggagcatgaccattgccgagtttgatctgagg
actgtaaagtacgaggtgaagtcaccaaagtgtcacgagctgatgttagttgctcctccg
catgaccgcatcagcttcaacttcctctgtgagcaggaggctcaggagtgggccactgtg
gtcacgtcggcactgaaagaagcacacagagttgtacctcaagaaaatgattcagagcag
ctctccattgggctccattttcagagcacctcaaccttacaaaaaacagaggattcatgc
atagagctgagcagagccatcgaggcgggcgacatgaagtctgcttctgtgtttgctgct
gcactcgcccatcagcacgcagcgctgaagatccagccttctgctaaagactacgaagac
actgaaatcaatttggctgttgtagtggaggattcctcctcatcctgttgtgtcactgtg
aaagttttcccacacatgactactgcatcgttgaaacagcagatgtttcttgagtacggc
tttcacccactggtgcagcgctggatcatcggccagtgtctgtgctctgatcagcgctcc
cttgcctcatatggtgttcgacagcatggagacacggcatacttgtaccttctgtcagcc
cgccatgctcacctaaccttccaagtcctgcagcaggaccaggagagtgctctcctcctc
agtccttctcagtccattcaaaaccctccactcgctgccaagtccacaaacgggccctcc
tcccaggaccagcggtcatacgccaccctacctccaagcttcaaggatggtcggtcagag
agacaacacatcagagaccttaccagcctggaaatgccagagctgaaggaagctctgagt
ctgagtccatcttcttctcagggttgggcgtgtccgtcgtgcacgtacataaacaagcca
acgcgcccgggctgcgagatctgcagcacgaaccgccccgagagctacgtcatcccagga
ggataccaaccggatgcactggagctccgacggatccagcgggagaaggaagccatcaga
cagtaccagcaggcgagggaggaagagcgaatggagaattttgcccgccttgttaggatg
gacggccatgacctgatacccaaccctgagcctgtggattgtaggatttgttatgtggat
ctgccgccaggagagggcgtcctgctgagggagtgtctgcactgtttctgcaaggagtgc
ctacgctccgtcatcatgctgagcgaggagcccgaggtttcctgcccgtacagagatgat
gcatattcttgtgccggtgctttgcaggagcgggagattcgagctctggtgtctgcagag
gagtacgagcgctggctgcagagaagcctgtcggtggcggagtctcggtgcgagggcagc
tatcactgcgcgactgctgattgcgtggggtggtgcgtgtacgaggatacggtcaatgtc
ttccactgccctgtttgtaggaaacacaactgcctcatttgcaaggccgtccatgaagga
atgaactgcaaacagtaccaggatgatctcacagcacgcgctaaaaatgactccgctgcc
aggaggacgacacatctactaaagactctcgtgcagtcgggagaagccatgcactgtcct
cagtgtggcatcattgtgcagaagagggatggatgtgattggctgcgctgcaccgtttgt
cacactgagatctgctgggtgaccagggggcctcgctgggggcccaggggtcctggagac
accagcggaggatgtcggtgcagtgtgaataatcagaaatgtcatcctaaatgccaaaac
tgtcactga
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