Nothobranchius furzeri (turquoise killifish): 107383084
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Entry
107383084 CDS
T05163
Symbol
drosha
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107383084 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107383084 (drosha)
03009 Ribosome biogenesis [BR:
nfu03009
]
107383084 (drosha)
03036 Chromosome and associated proteins [BR:
nfu03036
]
107383084 (drosha)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
107383084 (drosha)
Messenger RNA biogenesis [BR:
nfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
107383084 (drosha)
Ribosome biogenesis [BR:
nfu03009
]
Eukaryotic type
90S particles
RNase
107383084 (drosha)
Prokaryotic type
rRNA processing factors
107383084 (drosha)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
107383084 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
FerA
Cro
Motif
Other DBs
NCBI-GeneID:
107383084
NCBI-ProteinID:
XP_015810997
UniProt:
A0A1A7ZDN1
LinkDB
All DBs
Position
sgr08:complement(55267663..55394237)
Genome browser
AA seq
1327 aa
AA seq
DB search
MSFHQDRGGPRAGAPPGQHGSTQDYRPTNLRPPPPQPPAPPYHYDPQAPPGFHGNSGYMP
PHPDFMQYPPPSPSQTHTSLNQCPVRPPFPKPPPNFPPPPLPSSSAGPVPGAQVPPQNSY
HPYMMPSVPPPPLLHPPMPPPIASQSLSYHAPYSMSYPHPPFPPPTFNPGYTQSPGPIQP
DHSIRHRGPYSYEKPVDTRRSPERGYRHDDHRQKAYGYGDRHKPEFPVERKERGRSPDRR
GRTEGGRYKSEYERGRSPPRHRSRDRSRERHRHRDGLRAQSPDRYRKRPRSRSTSRDRKR
GRWEEEKDRRSESSSGQSRERSYSSVRSRDADEACGDRQREREKEKEKADEEKEEEELLK
PAWIRCTHAENFYSNDPMDQVGDSTVVGTSKLRDLYERFEEELGRRQERAKEARPKWEPP
KTKLDEDPDDSSSESDCDSDGGGSSCSSSSDSEVFDVIAEIKRKKAHPDRLHEELWYNDP
GQMNDGPLCKCSAKARRTGIRHSIYPGEEPVRQCRPMNNNAGKLFHYRITVSPPTNFLTD
RPTVIEYDDHEYLFEGFSLFSHTPLTSIPLCRVIRFNIDYTIHFIEEMAPENYCVRGLEL
FAAYLFQDILELYDWNLKGPEFDSESSGCQRFHFMPRFVRFLPDGGKEVLSMHQVLLYLL
RSSKALVPEEEIADMLQWEQLDWQKYAEECKGMIVTNPGMKPSSVRIDQLDREQFNADVI
TFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQLDKQKLTQREEALQK
IRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYVF
TDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMYMRKKGINTLIN
IMSRLGQDDPSPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQ
HLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGGLDEARELFGRL
LFNSEELREVWLNYPPHPLQVQEPQTDRQLIETSPVLQQLTSFEDSIGVLFTHVRLLARA
FTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQ
AKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFP
RLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGE
RIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRRERERQEKDTD
EVEEDRK
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccatcaggaccgtggaggtcccagagcaggagctcctccaggccagcacggc
tccacacaggactacagacccaccaacctcaggccaccccctccccagcctccagctcct
ccttatcattatgatccacaggctccacctggtttccatggaaacagtggctacatgccc
ccacaccctgactttatgcagtaccctcctccatcaccgtcccagactcacacttctttg
aaccagtgccccgtccgccccccgttcccaaagcccccgccaaacttcccaccccctccg
ttacccagttcctcagctggtcccgttccaggagctcaggttcctcctcagaactcttat
catccctacatgatgccatcagtccccccacccccgctactacaccctcccatgcctccc
cccatcgcctcccagtctttgagctaccacgcaccctactccatgagctatcctcacccc
cctttccctcctcccaccttcaaccccggctacacccagagccctggcccgattcagccg
gaccacagcatcagacacaggggaccatactcgtacgagaaacccgtggacaccaggaga
tctccagaaagaggctatcgccatgacgaccacagacagaaagcctacggctacggggac
agacacaagccagagtttcccgtagagaggaaggagcgtgggagaagtccagacaggcgg
gggaggacggagggaggacgctataagtctgagtacgagagaggacggagtccccccaga
caccggagcagggaccgcagcagggagagacaccgacacagagacggtctgagggcccag
tcacctgatcggtacaggaagagacctcgcagtcgttcaacaagcagagacaggaaacgt
ggtcgttgggaggaggagaaggaccggaggtcggaaagctcctcggggcagagcagagag
cggagctactcctccgtcaggagtcgagatgccgacgaggcgtgtggcgaccggcagcgg
gaacgggagaaggagaaagagaaggctgatgaagagaaggaagaggaagagctgctgaaa
cccgcctggatccgctgcacccacgctgagaacttctactccaacgaccccatggaccaa
gtgggcgactccaccgtggtcgggaccagtaagctacgcgacctctacgagcgctttgag
gaggagctggggcggagacaggaacgagccaaggaggccagacccaaatgggagccgccc
aaaaccaaactggacgaggatccggacgacagcagcagcgagtccgactgcgactcagac
ggagggggaagcagctgctccagcagctccgactcggaggtgtttgatgtcatcgctgag
atcaagaggaagaaagctcatcctgaccggctgcatgaggagctgtggtacaacgacccg
gggcagatgaatgatggccccctgtgtaagtgcagcgccaaggccagacgcaccgggatc
cgccacagcatctacccaggagaggagcccgtgaggcagtgccgtccgatgaacaacaac
gctgggaaactgttccactacagaatcaccgtgtctcctcccaccaacttcctgacggac
cggccgacggtgatcgagtacgacgaccacgagtacctgtttgaaggcttctctctcttc
tctcacacgcccctcactagcattccattgtgccgagtgatccgcttcaacatagattac
accattcacttcatagaggagatggcgccggagaactactgtgtccgagggctggagctg
ttcgccgcctacttgttccaggatattctggagctgtacgactggaacctgaaaggtcct
gagttcgattctgagtcctccggatgccagcggttccatttcatgcctcgatttgtcaga
ttcttaccggacggtgggaaggaggtgctgtccatgcaccaggtgctgctgtacctgctg
cgcagcagcaaggccctggtccccgaggaagagatcgccgacatgctgcagtgggaacag
ctggactggcagaagtacgctgaggagtgtaagggcatgatcgtcaccaaccctggcatg
aaacccagctcggtgcgaatcgaccagctggacagggagcagttcaacgcagacgtcatc
accttccccatcatcgttcacttcggcatccggccggctcagctcagctacgctggagac
cctcagtaccagaagctgtggaagagttacgtcaaactgcgccacctgctggcaaacagc
ccaaaggtcaagcagctggacaagcagaagctgactcagagagaggaagctcttcagaag
atccgtcagaagaacaccatgcgccgtgaggtgactgtggagctgagcagccagggcttc
tggaaaaccggaatccgctcagacgtctgtcagcacgccatgatgctccccgttctcacc
catcacatccggtaccaccagtgtctgatgcacctggacaagctcatcggctacgtcttc
acagaccgctgcctccttcagcttgccatgactcaccccagtcaccacctcaacttcggc
atgaatcccgatcacgctcgcaactcgctgtccaactgtggcatccgtcaacccaaatac
ggcgacaggaaggttcaccatatgtacatgaggaaaaaaggaatcaacacgttaattaac
atcatgtcccgacttgggcaggacgacccgtctccttccaggatcaatcacaacgagagg
ctggagttcctgggtgatgctgttgtcgagttcctcaccagcgtccatctctactacctt
ttccccagcctggaggagggcggcctggccacctacaggacggccatcgtccagaaccag
cacttagccatgctcgccaagaaactggagctggatcgcttcatgctctacgctcatgga
cccgacctgtgccgggagtcggacctgcgacacgccatggccaactgcttcgaagctctc
atcggtgctgtttatttagaaggaggtttggatgaagctcgagagctctttggaagactg
cttttcaacagtgaggagctgcgggaagtctggctcaactacccaccacaccccctgcag
gtgcaggagcctcagacggaccggcagctgatcgaaacatctccagttcttcagcagctg
accagctttgaggactccatcggggtcctgttcacccacgtgcgcctgctggcccgagcc
ttcaccttaaggaccgttggattcaaccacctcaccctaggccacaaccagaggatggag
ttcctgggagactccatcatgcagctcgtcgccaccgaatatctcttcatccactttccc
gaccaccatgagggacacctaactctcctccgcagctcgttggtgaacaaccgaacccag
gccaaggtggcggaggagttggggatgcaggagtttgccatcaccaacgacaaaaccaaa
cggcccgtggcgctgaggaccaagacgctggctgacctgctggagtctttcatcgccgct
ctctacatcgacaaagatctggagtacgttcacaccttcatgaacgtctgcttcttccct
cggctgaaggagttcatcctgaaccaggactggaacgaccccaagtctcagctgcagcag
tgctgtttgaccctgagaacggagggcaaggagcccgacatcccgctgtacaagaccttg
cagacggtggggccctctcacgcccggacctacacggtggccgtgtatttcaaaggggag
cggatcggctgcggaaaaggcccgagcatccagcaggctgaaatgggagctgcgatggat
gcgctggaaaaatataacttcccacagatggctcatcagaagcgcttcatcgagcggaaa
tacaggcaggagctgaaggagatgaggcgggagcgggagcgccaggagaaggatacggac
gaggtggaggaggacaggaagtga
DBGET
integrated database retrieval system
