Nothobranchius furzeri (turquoise killifish): 107383246
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Entry
107383246 CDS
T05163
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04080
Neuroactive ligand-receptor interaction
nfu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107383246 (thrb)
04081 Hormone signaling
107383246 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107383246 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
nfu03310
]
107383246 (thrb)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107383246 (thrb)
Nuclear receptors [BR:
nfu03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
107383246 (thrb)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
107383246
NCBI-ProteinID:
XP_015811247
UniProt:
A0A8C6M6I0
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Position
sgr09:6380709..6428968
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AA seq
415 aa
AA seq
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MSEPAEKCSPHWKDEAAQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEEN
RERRRKEELQKTAWDRLEPTQEEWDLIRLVTEAHMATNAQGNHWKQKRKFLVEEAMLLNE
ITCNLFYTSDQSAAGVKDTKPEDFGQGSVGNALEENKVDIEAFSQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGL
GVVSDAIFDLGISLASFDLDDSEVALLQAVILLSSDRPGLTSVDRIERCQEEFLLAFEHY
INSRKHKVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagcagaaaaatgctctccccattggaaagatgaagctgcacaaaacggg
tacattcccagttacctggacaaggatgagctgtgtgtagtctgtggggacaaagccacc
ggttatcactatcgctgcatcacctgtgagggttgtaagggattcttcagaaggacgatc
cagaaaaatctcaaccccacctacgcctgtaagtatgaagggaaatgcgtcatcgacaaa
gtgactcgaaaccagtgccaagaatgtcgcttcaagaagtgcatagcagtgggaatggct
acggacctggtgttggacgacagcaagcggctggccaagcggaagctgattgaggagaac
cgcgagcgccgtcggaaggaggagcttcagaagacggcgtgggaccgactggagcccacc
caggaggagtgggacctgatccggctggtgaccgaggcccacatggctaccaacgcacag
ggaaaccactggaagcagaagagaaaattcctggtcgaggaagcaatgcttcttaatgaa
ataacatgtaatttattctatacttctgaccagagtgcagcaggggtgaaggacactaag
ccagaggattttggtcaaggctcggtgggcaatgcgctggaagagaacaaggtggatatc
gaagcctttagtcagtttacaaaaattatcacccccgccataactcgagtggtggacttt
gccaaaaagctgcctatgttctgtgagctgccttgtgaagaccagatcatcctgttgaaa
ggctgctgcatggagatcatgtctctgagagccgccgtgcgctacgacccagagagcgaa
accctcacactcaacggtgaaatggccgtcactcgtggtcagcttaaaaatggaggcctg
ggtgtggtttcggatgctatttttgacctgggcatttcgctggcctcatttgacttggat
gactcggaggtggctcttctacaggccgtcatcctgctctcatccgatcgcccgggcctg
accagcgtggatcggattgagcgctgccaggaggagtttcttctggcttttgaacattac
atcaactcccgaaagcacaaagtggcccacttctggcccaagctgctgatgaaggtgacg
gacctgcggatgatcggcgcctgccacgctagccgcttcctgcacatgaaagtggagtgt
cccaccgagctgttccctccgctcttcctggaggtttttgaggactga
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