Nothobranchius furzeri (turquoise killifish): 107383248
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Entry
107383248 CDS
T05163
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107383248
04121 Ubiquitin system [BR:
nfu04121
]
107383248
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
107383248
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107383248
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
Lipoprotein_3
hAT-like_RNase-H
GSH_synth_ATP
zf-met2
Motif
Other DBs
NCBI-GeneID:
107383248
NCBI-ProteinID:
XP_015811252
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All DBs
Position
sgr09:6455371..6460557
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AA seq
612 aa
AA seq
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MAAAACSRELLPKKGTSNSVIWNWFGFHPADETQTKPCCKICFKTVATGSSSTTNLFQHL
RNKHPEEWEKCSRLRSDSGSSSTPAKKQTTLPESFTNCVPYDKNGARWKAITEAVTFYIT
TDMLPIYSVEKRGFNHLLKVLDARYVVPSRKYFADVALPHLYNTTREKIRSELEEMQFYS
ATTDLWSSRTMQPYLSLTAHYINTSWTLRSICLQTAYFPDNHTGEIIAHGLKDALSSWGL
SEERLVCMTTDSGTNIIKALKDNNWPSLQCFGHRLHNAIESGVKDPRIDRAIGVCKKAVS
AFSYSWKKRRDMTEVQAELGLPQHLLISESPTRWGSRQKMIERFLEQEKAITRVLGADKK
TRHLVPTWQDLEVLEATNKAVKPLQDFTDALSGESYVSVSCIKPVLHLFKTSLLLPEEED
LELTKTIKANIMRYLESKYCDLEKEELLDMATLLDPRFRTTYIDASKLEVVKKRAVSEIS
ALCNSTTEEAGPSAVQENTPPKKKMTLGAFFKKSAPSTMLHPQSEKTKIETELATYLLIP
DIEPDTDPLEWWKLHQPNFPRLSLLAKKYLSVPATSAPSERVFSVGGGIVTCNRACLKPD
VVDRLIFLAKNV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcagcgtgtagcagagaactacttccaaagaaaggcacaagtaattccgta
atttggaactggtttggttttcatccagcagacgaaacacagacgaagccttgctgcaaa
atatgtttcaaaactgttgctactggaagcagcagtacaacaaatctttttcagcacctg
aggaataaacatcccgaagaatgggagaagtgcagccggctccgcagcgacagcggctcc
tctagcacacctgctaaaaagcagactacacttcctgagagctttacaaactgtgtacct
tatgacaagaacggagcgcgatggaaagcgattacagaggcggtcactttttatattacc
acagacatgctgccgatttactctgtcgaaaagcgaggctttaatcacttgctgaaagtg
ttggatgcgaggtacgttgtccccagtcgcaagtatttcgccgatgtagcgctgcctcac
ctgtacaatacaacccgggaaaagatccgcagtgagctggaggagatgcagttctactca
gccacaacggacctgtggtccagccggacgatgcagccatatctgagcctgacggctcac
tacatcaacactagttggactctgcgcagcatctgccttcagacagcgtatttccccgac
aaccacactggtgaaataattgcccatggcttaaaagacgctctcagctcctggggactt
tcggaggaacgactcgtctgcatgacaactgatagtggcaccaacatcataaaagctctt
aaggacaacaactggcccagcctgcagtgttttggccacagactccacaacgctatagag
agtggtgtgaaggatccaaggatcgatcgggccataggggtctgcaaaaaagctgtatcc
gccttctcctacagctggaaaaaaaggcgagacatgacagaggtgcaggctgagcttgga
cttccccagcatcttttgatctcagaatccccaactcgttgggggtctcgtcaaaagatg
attgagcgctttcttgagcaagagaaggcaataactcgtgtcctgggtgcagacaagaaa
acacgtcatcttgttcccacgtggcaagatttggaagtattggaagccaccaacaaagca
gtgaaacctctccaggacttcactgatgcgctgtcaggggagtcatatgtcagtgtgtca
tgcatcaaaccggtgctgcatttgtttaaaacaagtctcctcctgccagaggaggaagat
ttggagctaacaaaaacaatcaaagctaacatcatgcgttaccttgaaagtaaatactgt
gatttggagaaagaggaacttttggacatggccacacttttagacccgaggttccgtaca
acctacattgatgcaagcaaactggaagttgtcaaaaaaagagcggtgtctgagatctct
gctctctgcaactctaccacagaggaagctggtccctcagctgttcaagagaacaccccg
ccaaaaaagaaaatgactcttggtgccttctttaaaaaatctgcaccatccaccatgcta
cacccacaatctgagaaaacaaaaattgagactgagcttgcgacgtatttacttattcca
gacattgagccagacacagatcctcttgaatggtggaagcttcatcagcccaactttcca
agactaagcttactggctaaaaaatatctttctgttccagccactagtgccccctcagag
agagtatttagtgtaggtggaggaatagttacctgcaaccgggcctgccttaagccagat
gttgtggacaggctcatctttcttgcaaaaaatgtttag
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