Nothobranchius furzeri (turquoise killifish): 107383271
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Entry
107383271 CDS
T05163
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107383271 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nfu01007
]
107383271 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfu03016
]
107383271 (vars2)
Enzymes [BR:
nfu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
107383271 (vars2)
Amino acid related enzymes [BR:
nfu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107383271 (vars2)
Transfer RNA biogenesis [BR:
nfu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
107383271 (vars2)
Prokaryotic type
107383271 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Anticodon_3
Motif
Other DBs
NCBI-GeneID:
107383271
NCBI-ProteinID:
XP_015811285
UniProt:
A0A1A8U1S3
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All DBs
Position
sgr09:complement(6937322..6962394)
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AA seq
1075 aa
AA seq
DB search
MWRAARRLSGTRTARRCSNNSSVFSTTVSSQPNLPETKPSARLQEEKRRRKRDREKLVLS
SPHTNAEDDKVNWSEKPKIVYNAHTPPGTKKDTSLPFPSSYSPDYVESSWYQWWEKEKFF
SPEQHEQLAHGEERTFSLCIPPPNVTGKLHLGHALTVAVQDALVRWRRMQGYRVLWVPGC
DHAGIATQTVVEKKLLREKGKRRQDFTREEFLQEVWKWKNEKGDEIYQQLRMLGSSLDWS
RACFTMDPGFSRAVTAAFVRLCDSGLVYRSEALVNWSCALQSTISDIEVDSVEVPGPTAL
SVPGYENKVEFGSMLTFAYPVEDHNSEVGVSTTRPETMLGDVAVAVHPDDPRYQALHGKH
CRHPFTNRLLPIITDPVVDMKLGTGAVKVTPAHDHTDFLLSLRHSLPRISVIGEDGTMMP
SCGQWLEGVKRFDARQMIVDALVEKKLFRGKQDHAMAVPVCSRSGDIIEPLLKKQWFVRC
DTMAKKAVQAVEDGHLEIIPQHFTKTWRNWMSNISDWCISRQLWWGHQIPAYQVQLTGSS
SSAEEKWVWGLSADEARRRAAVKYGVKPEEITLRQDPDVLDTWFSSGLFPFAMLGWPEQT
SDLQHFYPNSILETGSDLIFFWVARMVMLGTELTGQLPFKQVLFHSLVRDKYGRKMSKSL
GNVIDPLDFIHGVSLQRLQEKVKEGNLDPREHLVALEAQRKDFPKGIPQCGTDALRLALC
SHKIQGEDISLSVSEVLNCRHFCNKMWQTLRFTLGVLENSPAPMGTPEEMVTEGSMERWI
CSRLYSTILQCEQALEVYEVHAATFAMYSFWVHSLCDVYIEYAKPVLLKQDKGTVVQTDP
AHSDITKTVLFHCVSLSLALLSPFMPFITEELWQRLQPFRSDPGTQTSLCLQPYPRSSQL
VHWHFPEVEKNFLFVQEVVRVTRSLRAQCGLTKEKPDLWVECSPSQARILTDFGSAVLTL
GRISNFHISCPDGADLPSTQSIPPPKGSLIGVVDHTCRLHLPPQSGVILDQQLLQLSQRR
SKLTPKLEQLLDRLRSSDYQTKVPDHIQQQTAKKVLALQQELKTIEDQMKVLEKI
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtggagggcagctcggaggctttcagggaccagaacagccagacgctgttccaacaac
tcctccgtattttcgaccaccgtctcctctcagccgaacctcccagaaacaaagccctct
gcccggcttcaggaggagaagcggaggcgcaaacgggaccgggagaagctcgtcctgtcc
agcccgcacacaaacgctgaagatgacaaagtaaactggagtgaaaaaccgaagattgtt
tataatgcacacacacctcctgggacaaagaaagataccagtctgccgttcccatcctcc
tacagtccagactatgtggagtccagttggtatcagtggtgggaaaaagagaaattcttc
agtcctgaacaacatgaacagttggcccatggcgaggagcggaccttctctctctgtatc
ccacctccaaacgtgacaggaaagctgcacctgggccacgctctgactgtggctgtacag
gatgctctggttcgatggaggagaatgcagggctacagggttctgtgggttcctggatgt
gaccacgcaggtatcgcaactcagactgttgtggagaagaaacttttacgtgaaaaaggg
aaacgcagacaagacttcaccagagaagagttcttacaggaagtgtggaagtggaagaat
gaaaaaggagatgagatctatcagcagctgaggatgctgggttcctctctggactggagc
agagcatgtttcactatggatccaggtttcagcagagctgtgacggcagcttttgtcaga
ctctgtgattcaggtctggtttatcgatcagaagctctagtcaactggagctgtgctctt
cagtccaccatctctgatatagaggtggactccgtggaagttcccgggccgaccgcgctg
tctgttcctggttatgagaataaggtggagtttggatcaatgctgacctttgcgtacccc
gtagaagaccacaacagtgaggtgggcgtttccaccactcgtcctgagaccatgcttggt
gatgtggctgtagctgttcacccggatgatcctcgataccaggctcttcatggtaaacac
tgcaggcatcctttcaccaacagactcctccccatcatcactgaccctgtggtggacatg
aaactgggaacaggagcagtgaaggtgactcctgctcacgatcacacagacttccttctg
tctctgagacactctctgcctcgcatatctgtgattggagaagatgggacaatgatgcca
tcctgtggacagtggctggagggtgtaaagcgatttgatgccagacagatgattgtggac
gctctggttgagaagaagctgttcagaggaaagcaggaccatgccatggcagttccagtc
tgcagccgatccggagacatcatcgaacctcttctgaagaagcagtggtttgttcgctgt
gacacaatggctaaaaaagctgttcaggctgtggaagatggacatctggaaatcattcct
caacacttcaccaagacatggaggaactggatgtccaacatcagtgattggtgcatttcc
agacagttgtggtggggtcatcagatccctgcctaccaagtacagcttactggttccagt
tccagtgcagaggaaaagtgggtttggggcctgagtgcagatgaggcccgacggagagct
gctgtgaaatatggggtgaaaccagaagagatcactttaagacaggacccagatgttctg
gacacctggttctcctctgggctgttcccttttgctatgcttggctggccagaacagaca
tctgatctgcagcacttttaccccaactccatcctggagacaggcagtgacctcatcttc
ttctgggtagcccggatggtgatgctgggaaccgagctaacgggccagctcccctttaaa
caggtgctgttccactccctggtgagggataaatacgggaggaagatgagtaaatccctc
gggaacgtcattgatccattagactttatacatggagtttctctccagagacttcaggag
aaggtgaaggagggaaaccttgatcctagagaacatctcgtggctctggaggcccagagg
aaggacttccctaaagggatccctcagtgtggaactgatgctctgagactagctctttgt
tctcacaagatccaaggtgaagacatcagcctgtcagtctctgaagtcctgaactgcaga
cacttctgtaataaaatgtggcagactctaaggtttaccctgggggttctggaaaatagt
ccagctccgatgggaactcctgaagagatggtcactgaagggagcatggagagatggatc
tgctccagactttacagcaccatcctccagtgtgaacaggctctggaggtctatgaggtc
cacgctgccaccttcgcgatgtactccttctgggtccacagcctgtgtgacgtttacata
gaatatgcaaagccagttctgctgaagcaggacaaggggacagtagtccagacggaccca
gctcacagtgacatcaccaagactgtcctctttcactgcgtgtctctgtctctggccctg
ctgtccccgttcatgcccttcatcacggaagagttgtggcagcgactccagcccttcaga
tctgatcctgggacccagaccagcctgtgtctgcagccgtacccacggtccagtcaactg
gttcactggcatttccctgaagtggaaaaaaatttcctgtttgtccaagaagtggtccga
gtgacccgctccctgagagcccagtgtggtctcacaaaggaaaaacccgacctgtgggtc
gagtgttcacccagtcaggctcggattctgactgactttgggtcggcggtcttgacttta
ggcagaatctccaacttccacatctcctgtcctgatggagcagatctcccatccacacag
tccatacctccacctaaaggaagcctcattggtgtggtggaccacacctgtcggcttcac
ctgcctcctcagagcggcgtgatcttggatcaacaactcttgcagctttcccagcggaga
agcaaactaactccaaaactggaacaactcctcgacagacttcggtcctctgactaccaa
acaaaagttcctgatcacatccagcagcagacagcgaaaaaggtcttggccttgcagcag
gaactaaaaaccattgaggaccagatgaaggtcttggagaagatctga
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