Nothobranchius furzeri (turquoise killifish): 107383294
Help
Entry
107383294 CDS
T05163
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04145
Phagosome
nfu04814
Motor proteins
nfu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107383294
09142 Cell motility
04814 Motor proteins
107383294
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107383294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107383294
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nfu04812
]
107383294
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
107383294
Cytoskeleton proteins [BR:
nfu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
107383294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Dynein_IC2
Beta-prop_EML
WD40
WD40_Prp19
WDR55
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
107383294
NCBI-ProteinID:
XP_015811315
UniProt:
A0A9D3BVD2
LinkDB
All DBs
Position
sgr09:complement(8016576..8129918)
Genome browser
AA seq
506 aa
AA seq
DB search
MQRLGASKITQVDFLPKEVVSYSKETQTPSNPNQSEVEEEEEDEEMMEAKPGPESEQRDE
DESKETKEGSFPFLRELTEEERQQILHSSEFQSFFDCSIRVMERALAEDSDIFFDYSGRD
LEEKEGDSGSGSSLSFSRLFYDEHWSKHRVITCLDWSPQYPELLVASYNNNEDAPHEPDG
VALVWNMKFKKATPEYIFHCQSPVVSVGFAKFHPNLVVGGTYSGQIVLWDNRSHRRTPVQ
RTPLSAAAHTHPVYSVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQETMELVYNKSKP
VAVTGMAFPTGDVNNYVVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHGAVGTV
DFSHLFITSSFDWTVKLWSTKHNKPLYSFEDNADYVYDVMWSPVHPATFAAVDGMGRLDL
WNLNNDTEVPAASVTIEGASALNRVRWSSGGREVAVGDSEGRVWIYDTGELSVAHPDDWA
RFARTLMEIRANRADGEEEGPMELAS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggctgggggcctctaagatcacacaagtggacttcctgcccaaagaggttgtc
tcctacagcaaggagacgcagacgccgtccaaccccaaccagtccgaggtagaggaggaa
gaggaagatgaagagatgatggaggcaaagccaggcccagagtctgagcagcgagatgaa
gatgaaagcaaggaaaccaaagaaggctcgttcccattcctgcgagagctgacggaagag
gagaggcagcagatcctgcactcctctgagttccagagcttctttgactgcagcatccgg
gtgatggagagggctctggctgaagacagcgacattttcttcgactacagtggccgagac
ctggaggaaaaagagggagactcaggtagtggctccagtttgtccttcagccgactcttc
tatgacgagcactggtccaaacatcgtgttatcacctgtctggactggtcccctcagtac
cctgagttgttggtcgcctcctataataacaatgaagatgctcctcatgaaccagatggt
gttgccctggtgtggaacatgaagtttaagaaggcaaccccagagtacatctttcactgt
cagtctccggtggtttctgttggttttgccaagtttcatcccaacctggttgtcggaggg
acctattcaggacagatcgtcctgtgggacaaccgtagtcaccgtcggacccctgtccaa
aggactcccctgtccgctgcagcacacactcacccagtgtactccgtgaacgtggttggt
acccagaatgccaacaacctgatcactgtatctacagatggcaggatgtgctcgtggagt
ctggacatgctctctcagcctcaggaaaccatggagctggtgtataataaatccaaaccc
gtggcagtgacaggcatggccttccccactggcgacgtgaacaactacgtggtggggagt
gaggagggcaccgtgtacacggcgtccagacatggcagtaaagcaggcatctgtgagatg
ttcgagggccaccaggggccagttactggcatcagctgccacggtgcggtcggcaccgta
gacttctctcatctcttcatcacatcctcgtttgactggaccgtcaaactctggagcacc
aagcacaacaagcccctgtactcttttgaggacaatgccgactatgtgtatgatgtcatg
tggtcgccggtgcatcccgccacgtttgcagcagtggatggcatgggtcgcttggacctg
tggaacctcaacaacgacacagaggtgccggctgccagcgtgaccattgagggcgcttcg
gctctcaacagggtccgctggtcgtcaggagggagggaggtggctgtgggcgactcagag
ggcagagtttggatctacgataccggagagctgtcagtggcccaccctgatgactgggca
cgctttgctcgcacgctgatggagattcgggctaaccgtgccgatggtgaggaggagggg
cctatggagctggcttcatag
DBGET
integrated database retrieval system
