Nothobranchius furzeri (turquoise killifish): 107383308
Help
Entry
107383308 CDS
T05163
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107383308 (vps50)
Membrane trafficking [BR:
nfu04131
]
Protein recycling
Others
EARP complex
107383308 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Kgd4-YMR31
OVT1
Motif
Other DBs
NCBI-GeneID:
107383308
NCBI-ProteinID:
XP_015811340
UniProt:
A0A1A8B5F3
LinkDB
All DBs
Position
sgr09:complement(8596781..8816865)
Genome browser
AA seq
965 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELRELPIDPQAEQEIIDSIEEV
YFSSDSFDMVQHELEKLPPELNLQELEEYRDTLKKQQDAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLRVSKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDILHYTKVQLAYSLLDKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLMDLCKALWEVMLSYYRTMQWHEEHDKQDASPTPDE
AAASDEVMVDRSYVKKKLEHGLTRIWQDVQLKVKSYILGTDMSNFKYDDFIVVLDVISRL
MQVGEEFCGSKSEVLQESVKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNIAQ
LHEFKFMGQCHSPSISPSRQSASSSVPLQEERSLFQQFLQDGNPFEMHIEHKEEETEDVL
ASNGYESDEMEKSVYQDYDSDSDVPDELKQDYIDEQTGDAPQNRVSKESQRGKKKSDYNL
SKANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDM
YESSGLGLISSRLRTTLNRIQENLIDMDSLGENSGVHGSAEDRKEKVPSPHLSQLVVLTN
SGTLYGLAQRVVATESLVFLAEQFESLQSHLDTVMPAAKKPFLQQFYSQTVSTAGELRKP
IYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNVYVDVLLKEFEQFNKRLSDVSKQVRI
PLPVSNVLWEHCIRLANRTLVEGYSNVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPIPD
KEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAIDDI
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagataaagtctcttatggcccgtcagggtctgaaaagtccccaagagagtatg
gcagacctgagtcctgtggagaacctgaggatcccgagcaaggaggagttgcgggagctg
agggagctgcccatcgacccccaggcagagcaggaaatcatcgacagcattgaggaggtc
tacttctccagcgactccttcgatatggtgcagcatgagctggagaaactcccacctgag
ctgaacctgcaggagctggaggagtacagagacacgctgaagaaacaacaggatgccgtt
tccaaaaaggtggctgacctcatcctagagaagcagcctgcttatgtcaaggaactggag
agagtgacggcgctacagaccaacctgcagctggcagcagtcatttgcactaatgctaga
agacaacttcgtgtgtcaaaggaggggttcactgaggccagcctgggtctgttagccaat
cagaggaggcgacaactgctgacaggcctgctcaagtccctaaggaccatcaagaccctg
caaagaacagatgtacgactcagcgagatgcttgaggaggaagactatccgggagctatc
cagctctgtctggaatgtcaaaaggccgccagcaccttcaaacactacagctgcatcagc
gaactgaattctaaactacaagacactctggagcaaatagaggagcagcttgatgtcgcc
ctgtcgaagacgtgcaagcactttgatattttgcactacaccaaggtccagctggcctac
tcgctcctcgataaaacacagactgctatggaccagctgcacatgcacttcacgcaggct
atccacaacacagtgttccaggttgtactgggatacgttgagctgtgtgctgggaacgcc
gacaccaagttccagaagatgcagtataaagacctctgcacgcatatcacccccgacagt
tacattccctgcctgatggatctctgcaaggctttgtgggaggtgatgctgagctactac
cgcactatgcaatggcatgaggagcatgacaaacaggatgcttctcctactccagatgag
gcagcagcgtctgatgaggtgatggtggaccggagctacgtgaagaagaagctggaacat
ggactcacccgaatctggcaggatgtccagctgaaagtgaagtcgtacatcctgggaaca
gacatgtccaacttcaaatacgatgatttcatcgtggttctggatgtcatcagcaggttg
atgcaggttggtgaggaattctgtgggagtaaatcagaagttcttcaagagtcggtcaaa
cgtcagagcgttaactactttaaaaactatcacagggcacgactggaggagctgaggatg
tttctggaaaatgagacgtgggagctttgcccagtcaagtcgaactttaatatcgcccag
ctccacgagttcaagttcatgggccagtgtcactctccgtccatttccccgagcagacag
tctgcatcctcatctgtccctctccaggaggagcggtccctgttccagcagttcctgcag
gacggaaacccctttgagatgcacattgagcacaaggaggaagagacggaggatgtgctg
gcatctaatgggtacgagtcagatgagatggagaaaagtgtgtatcaggactatgacagc
gacagtgatgtccctgatgaactgaagcaggactacatagacgagcagacgggcgatgcc
cctcagaaccgtgtgtctaaagagagccagagaggcaagaagaagtccgattacaacctg
agcaaggccaacgcaccgattctcaccaacaccaccctcaacgtcatacggcttgttggg
aagtacatgcagatgatgaacattctgaagccaattgcctttgatgtcatccactgcgtg
tcacaactcttcgactactacctttatgctgtgtacaccttctttggacgtaatgacatg
tatgagtcatcaggtctgggccttatcagcagccgactgagaaccaccctgaaccggatc
caggagaacctcattgacatggactctttaggggaaaactcaggagtccatggctcggca
gaagacaggaaggagaaggtgccaagtcctcatctcagccagctggtggtcctcaccaac
agcgggacgctgtatggtctggctcagagggtggtggccaccgagtctcttgtgtttttg
gctgagcagtttgagtccctccagtcccacttggacaccgtgatgcccgctgctaagaag
cctttcctacaacagttttattcacagacggtctctacagccggtgagctgaggaaaccg
atatactggatcgtagcagccaaggccatcgactacgagcagatgctgctgctaatggct
ggagttaaatgggacatcaaggagataatgtcgcagcacaacgtgtacgtagatgtcctg
ctgaaggagtttgagcagtttaacaagcggctgagtgatgtttctaagcaagtacgcatc
cctctccctgtgtccaacgtcctgtgggaacactgcatccgcctggccaaccggactctg
gttgagggctactctaatgtgaagaaatgcagcaatgagggccgggccttgatgcagctg
gattttcaacagttcctgatgaagctggagaaactgacagacctgagaccgatccctgac
aaggagtttgtggagacctacatcaaggcctactacctgactgagaacgacatggagcag
tttatcaaaaaccacagggagtactccatgaagcagctagccaacttggtaaatgtttgt
ctgggctcacacataaacaagaaggcacgtcagaagcttctagcagctatcgatgacatc
gacaggcccaagagatag
DBGET
integrated database retrieval system
