Nothobranchius furzeri (turquoise killifish): 107383388
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Entry
107383388 CDS
T05163
Symbol
col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
107383388
NCBI-ProteinID:
XP_015811444
UniProt:
A0A1A8B5E9
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Position
sgr09:11762877..11830378
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AA seq
684 aa
AA seq
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MLVTMLLAPVCVLLMLGGRALGGGYPPITHMKYMQPMMKGPVGPPFREGKGHYVDMPPMM
KGEPGPQGKPGPRGPPGPSGLPGKPGMGKPGLNGQPGPQGPPGLTGIGKPGLPGLPGKIG
PKGNPGLNGEGGPRGEPGPRGPPGQPGVPGPAGLSLNGKPGLPGIRGPAGSRGEPGITGI
PGNPGERGIKGESGNGKPGPPGIRGPPGLKGSTGPAGLPGIGKPGPKGLPGLPGTKGDQG
LPGDHGEPGAPGPTGLQGLPGAVGLGKPGLDGLPGEQGPVGPKGEPGSRGNPGNPGPAGY
GKPGLSGPKGEKGQNGFPGLPGDKGEIGITGPSGQQGLDGLPGPPGIQGPKGLPGNHGMP
GQKGELGPQGPPGIPGLKGDQGLGGIPGNPGISGEKGMPGPIGPIGKPGPKGESGQIGQT
GNPGLMGAPGPKGEAGFMGTPGPRGQSGIPGLQGPMGPMGPQGVPGQRGEPGLPGPPGQG
KLGDKGGMGPQGPPGKPGPAGLNGHPGLPGPPGPPGPPGNGQTVVAGPTDTGLGGEEIPG
IKPAFTQVALSASLAPAFTAILTTPFPPSGMPVKFDRTLYNGQNAYSTSTGIFTAPLSGV
YYFSYHMHVKGTSLWVALYRNNVPATYTYDEYKKGYMDQASGSAVLELKEGDEVFVQMPS
DQANGLYSTEYIHSSFSGFLLCPT
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaccatgctgttggctcctgtctgtgtgctgctgatgcttggagggcgagct
cttgggggaggctatcctcccataacccacatgaagtacatgcagccaatgatgaaagga
cctgttggaccacccttcagagagggcaagggacattatgttgatatgccgcccatgatg
aagggggaaccaggccctcaaggcaaacctggaccaagaggtcccccaggaccgtcagga
cttccggggaaacctggaatgggcaagccgggtcttaatggacagcccggccctcagggt
cctcctggtctaacaggcattggcaagcctggacttccaggtctcccaggaaagattgga
ccaaaagggaatccaggacttaatggtgagggtgggccacgtggtgaaccaggtccacgt
ggacctcctgggcagcctggggttcctggaccagctggtttgtctctgaatggaaagcct
ggactcccaggtatcagaggtcctgctgggtctcgcggggaaccaggaataacaggtatt
cctggaaatccaggagaacgtggaattaagggtgagagtggaaatggaaaaccaggacct
ccaggtataaggggccctccaggtctgaaaggtagtacagggccagctggtttaccaggg
attggcaaaccaggacctaaaggtttgcctgggctacctggaactaaaggtgatcaagga
cttccaggggatcatggagaaccaggagctcctggtccaacaggtcttcaaggtttgcca
ggggctgttggattagggaaacctggtctggatggacttccaggggaacaaggtccagta
ggtccaaaaggtgaaccaggatcccggggaaatcctggaaaccctgggccagccggctat
ggaaaacctggtctgagtgggccgaaaggtgaaaaaggtcaaaatggatttcctggtctc
cctggggacaaaggggagattggaatcactggcccaagtgggcagcaaggtcttgacgga
cttccaggaccaccaggcattcaaggtccaaaggggcttccaggtaaccatggaatgcct
ggccagaagggagaactaggaccccagggccccccaggaatacctggacttaaaggtgat
caaggccttggtggtatccctggaaatcctgggatctcaggtgaaaaaggcatgccagga
ccaattggccccattggaaaacctggacccaaaggtgagtcaggacaaattggccagact
gggaatccaggactgatgggggctccaggtcctaaaggagaggcaggctttatggggaca
ccaggtcctaggggtcagtcaggcattcctggtctccaggggcctatgggtcccatgggc
ccacagggtgtccctggacaaaggggtgaacccggactcccggggcctccaggacaaggc
aagttgggtgacaagggtggaatgggtccccagggtccaccgggtaaaccaggtcctgct
gggcttaatggtcatcctggcctacctggtcctccaggacctcctggccctccaggaaat
ggtcagactgttgttgctgggccaaccgatacagggttgggtggagaggaaatcccaggt
ataaaaccggcattcacacaagttgcattgtctgcatctctagcaccagcctttacagcc
attcttacaacaccattccccccctccggcatgccagtcaaatttgacaggaccctgtat
aatggacaaaatgcctacagtacatctacaggcatctttacagctcctctgtctggtgtc
tactacttctcgtaccacatgcatgtaaagggaacaagcttgtgggtggctctgtatagg
aacaatgttccagccacttatacctacgatgaatacaagaaaggttatatggaccaagca
tctggtagtgctgtgcttgagctcaaggaaggtgatgaggtatttgtccagatgccctca
gatcaagcaaatggcctttattctaccgaatacatccactcctcattttcaggtttcctc
ctctgtcccacataa
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