Nothobranchius furzeri (turquoise killifish): 107383480
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Entry
107383480 CDS
T05163
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107383480 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107383480 (copa)
Membrane trafficking [BR:
nfu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
107383480 (copa)
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107383480 (copa)
Exosomal proteins of bladder cancer cells
107383480 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
107383480
NCBI-ProteinID:
XP_015811602
UniProt:
A0A1A8AMS6
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Position
sgr09:complement(24548851..24559880)
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AA seq
1222 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETE
VRGITGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSSDTSHVALLAKHAIMICNRKLDSLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDP
EKETVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAVQMAADLDMDTA
GAEGWGDDAELTMDEDGFTDAQDGLGDEGIGKEEGGGWDIDEDVELPPELDVPVGTGGGT
EDGFFVPPTKGMSPTQMWCNNSQLPVDHILAGSFETALRLLHDQVGVVNFAPYKSLFMQT
FSRGRTCFLGLPSLPCLRGYPQRNWKDCGAKQGLPAVGLRLSDLIARLQQCYQLTTSGRF
EDAVERFRAILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMEIERKKLPKETLEQQK
RICEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQTR
KILGACEKTLTDTHQLNYDPHNPFDLCAASFVPLYRGRPIEKCPLSGAGYCPTYKGQICR
VTQVTEIGKDVIGLRVSPLQFR
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgttaactaaatttgaaacgaagtcggcccgagtcaaaggcctgagtttccatcccaaa
aggccatgggttcttgcaagtttgcacaacggtgtgatccagctgtgggactatcggatg
tgcacactgatcgacaaatttgatgaacatgacggccccgtccgaggaattgatttccat
aaacagcagcccctgtttgtgtctggaggagatgactataaaatcaaggtgtggaactac
aagctgaggcgctgcctctttactcttctcggacacctggactacattagaacaacattc
tttcatcatgaatacccctggattctgagtgcctctgatgatcagacaatccgcatctgg
aactggcagtccaggacgtgtgtatgtgtactcacaggacacaatcactacgtgatgtgt
gcccagttccacccatctgaagacctggtggtgtctgccagtctggaccagaccgtgcga
gtgtgggatatctccggtctgaggaagaagaacctgtctcctggcgccgtggagacggaa
gtgcgcggcatcactggggttgacctatttggcgcctcggatgctgttgtgaagcatgtc
cttgagggtcatgatcgtggggtcaactgggctgccttccatcccagcatgcctctcatc
gtgtcgggagctgatgacagacaggtgaagatctggaggatgaacgagtccaaagcatgg
gagctcgatacttgccgtggtcactacaacaatgtgtcctgtgcagttttccacccacgt
caggagctcattctgtccaactctgaggacaagagcatccgagtctgggacatgtccaaa
aggaccggagtgcaaacctttcgccgtgatcatgatcgcttctgggtcctgggggctcac
ccaaacctcaacctgtttgcagcaggtcatgatagtggtatgattgtattcaagctggag
cgggagcgccctgcgtacgctgtacacggcaacatgctgtactacgtcaaggatcgcttc
ctccgtcagctggacttcaacagcagcaaagacactgctgtcatgcagctccgcagtggt
tctaagttcccggtgttcagcatgtcttacaaccctgccgagaacgctgtcctgctctgt
actagggccaccaacctggagaacagtacttacgacttgtactcgattcccaaagaaagt
gactctcagaaccctgatgcacctgaggggaaacgatcttctggtctgacggctgtctgg
gtggcaagaaaccggtttgctgttctcgatcgcatgcactctcttctgatcaaaaacctg
aagaatgaaatagtgaagaaagtccaggtgccgagctgcgaggagatattctacgcagga
acgggttcgctgctgctgcgggatgctgatggcgtcacgctgttcgacgtgcagcagaaa
cgttcgctggccactgtgaagatcgctaaggtcaaatatgtggtgtggagctctgacacc
agccacgtggctctgctggctaaacacgctataatgatttgcaaccgtaagctagatagt
ctctgcaacatccacgaaaacatccgagtgaagagcggagcctgggatgagagtggggtc
ttcatttacaccacctccaaccacatcaaatatgccctcacttctggtgaccacggcatc
atcaggaccctggatctgcccatctacgtgacccgtgtgagaggaaacagtgtttactgc
ctggacagagaatgcaggccccgtgtgctcaccatcgacccgactgagtaccgcttcaaa
ctggctctggtcaatcgcaaatatgatgaggtgcttcacatggtgcgtaatgccaagctg
gtgggccagtccatcattgcctacctgcagaagaagggctaccctgaggttgcgctgcac
tttgtcaaagatgagaagacacgtttcagcttggctctggaatgtggaaacatcgaggtg
gcactggaggcagccaaggccctggatgagcgcagctgctgggagcgtctgggtgaggca
gcactgctgcagggacaccaccaggttgtggaaatgtgctaccagagaaccaagaacttt
gacaagctcaccttcctctacctcatcacgggtaacttggccaagctgcgcaagatgatg
aaaatagctgagatcagaaaggacatgagcggccactaccaggcagctctttacctgggc
gatgtcagcgagagggtccgcatcctgaagaactgtggacagaagtctctggcttacctg
actgcagccacacatgggctggatgaggaggcagaggctctaaaggagacgtttgaccca
gagaaagaaacggtgccagaggtagatcctaatgcacagctgctgcagcctcctccaccc
atcaaccctctggacaccaactggcctctgctcacggtttctaagggcttctttgaggga
gccattgctgcaaagggtaaggcagttcagatggctgcagatctggatatggacaccgct
ggagccgagggctggggagacgatgctgagctcactatggacgaagatggcttcactgat
gcccaggatggattaggagatgaaggaattgggaaagaggaaggaggaggttgggatatt
gatgaagatgttgaacttcctccagagttggacgtgccagttggaacaggtggaggaact
gaagatggcttcttcgtgccacctaccaagggcatgagtccaacccagatgtggtgcaac
aactcccagctgccagtggaccacatcttggctggctcctttgaaaccgctttgagactt
cttcacgatcaggttggagttgtaaactttgccccctacaagtcgctgttcatgcagacg
ttttccagaggacgcacctgcttcctggggctgccttcactaccttgtctgcgtggttat
ccccaaaggaactggaaggactgtggagcaaaacaaggcctgcctgctgtggggctgcgc
ctctctgatctgattgcccgcctgcagcagtgctaccagctgaccacgtctgggcggttt
gaggacgctgttgagcgcttcagagccatcttgctttctgttcctctgctggtggttgat
aacaagcaggaaattgcagaggctcagcagctcattacaatatgcagagagtacatagtg
ggcctgactatggagattgagaggaagaagctgccaaaggaaacattggagcagcagaag
aggatttgtgaaatggctgcctatttcacccactgcaatctacagcccgtccacatggtg
ctggtgttgcgtacagccctcaaccttttcttcaaacttcgcaacttcaaaacggctgca
ggatttgcacggcgccttctggagcttgggccgaagccagatgttgcacagcagacccgc
aaaatcttgggggcttgtgagaagaccctgacggacacccaccaactgaactatgacccc
cacaatccatttgatctgtgcgctgcctcctttgttccactctaccgtggacgtcctatt
gagaagtgcccactgtctggagctggctactgccccacttacaaaggccagatctgcaga
gtcacacaggtgactgagattggtaaggatgtgatcggtctgcgtgtgagtcctctccag
ttccgctaa
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