KEGG   Nothobranchius furzeri (turquoise killifish): 107383480
Entry
107383480         CDS       T05163                                 
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nfu04131]
    107383480 (copa)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nfu04147]
    107383480 (copa)
Membrane trafficking [BR:nfu04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    107383480 (copa)
Exosome [BR:nfu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107383480 (copa)
  Exosomal proteins of bladder cancer cells
   107383480 (copa)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 TPR_COPA_B Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_RFWD3 DSE1_N Beta-prop_NOL10_N WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SPT8 PAC11 CFAP251_N ASA1 Beta-prop_DCAF4 TRM82_WD NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 107383480
NCBI-ProteinID: XP_015811602
UniProt: A0A1A8AMS6
LinkDB
Position
sgr09:complement(24548851..24559880)
AA seq 1222 aa
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETE
VRGITGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSSDTSHVALLAKHAIMICNRKLDSLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDP
EKETVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAVQMAADLDMDTA
GAEGWGDDAELTMDEDGFTDAQDGLGDEGIGKEEGGGWDIDEDVELPPELDVPVGTGGGT
EDGFFVPPTKGMSPTQMWCNNSQLPVDHILAGSFETALRLLHDQVGVVNFAPYKSLFMQT
FSRGRTCFLGLPSLPCLRGYPQRNWKDCGAKQGLPAVGLRLSDLIARLQQCYQLTTSGRF
EDAVERFRAILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMEIERKKLPKETLEQQK
RICEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQTR
KILGACEKTLTDTHQLNYDPHNPFDLCAASFVPLYRGRPIEKCPLSGAGYCPTYKGQICR
VTQVTEIGKDVIGLRVSPLQFR
NT seq 3669 nt   +upstreamnt  +downstreamnt
atgttaactaaatttgaaacgaagtcggcccgagtcaaaggcctgagtttccatcccaaa
aggccatgggttcttgcaagtttgcacaacggtgtgatccagctgtgggactatcggatg
tgcacactgatcgacaaatttgatgaacatgacggccccgtccgaggaattgatttccat
aaacagcagcccctgtttgtgtctggaggagatgactataaaatcaaggtgtggaactac
aagctgaggcgctgcctctttactcttctcggacacctggactacattagaacaacattc
tttcatcatgaatacccctggattctgagtgcctctgatgatcagacaatccgcatctgg
aactggcagtccaggacgtgtgtatgtgtactcacaggacacaatcactacgtgatgtgt
gcccagttccacccatctgaagacctggtggtgtctgccagtctggaccagaccgtgcga
gtgtgggatatctccggtctgaggaagaagaacctgtctcctggcgccgtggagacggaa
gtgcgcggcatcactggggttgacctatttggcgcctcggatgctgttgtgaagcatgtc
cttgagggtcatgatcgtggggtcaactgggctgccttccatcccagcatgcctctcatc
gtgtcgggagctgatgacagacaggtgaagatctggaggatgaacgagtccaaagcatgg
gagctcgatacttgccgtggtcactacaacaatgtgtcctgtgcagttttccacccacgt
caggagctcattctgtccaactctgaggacaagagcatccgagtctgggacatgtccaaa
aggaccggagtgcaaacctttcgccgtgatcatgatcgcttctgggtcctgggggctcac
ccaaacctcaacctgtttgcagcaggtcatgatagtggtatgattgtattcaagctggag
cgggagcgccctgcgtacgctgtacacggcaacatgctgtactacgtcaaggatcgcttc
ctccgtcagctggacttcaacagcagcaaagacactgctgtcatgcagctccgcagtggt
tctaagttcccggtgttcagcatgtcttacaaccctgccgagaacgctgtcctgctctgt
actagggccaccaacctggagaacagtacttacgacttgtactcgattcccaaagaaagt
gactctcagaaccctgatgcacctgaggggaaacgatcttctggtctgacggctgtctgg
gtggcaagaaaccggtttgctgttctcgatcgcatgcactctcttctgatcaaaaacctg
aagaatgaaatagtgaagaaagtccaggtgccgagctgcgaggagatattctacgcagga
acgggttcgctgctgctgcgggatgctgatggcgtcacgctgttcgacgtgcagcagaaa
cgttcgctggccactgtgaagatcgctaaggtcaaatatgtggtgtggagctctgacacc
agccacgtggctctgctggctaaacacgctataatgatttgcaaccgtaagctagatagt
ctctgcaacatccacgaaaacatccgagtgaagagcggagcctgggatgagagtggggtc
ttcatttacaccacctccaaccacatcaaatatgccctcacttctggtgaccacggcatc
atcaggaccctggatctgcccatctacgtgacccgtgtgagaggaaacagtgtttactgc
ctggacagagaatgcaggccccgtgtgctcaccatcgacccgactgagtaccgcttcaaa
ctggctctggtcaatcgcaaatatgatgaggtgcttcacatggtgcgtaatgccaagctg
gtgggccagtccatcattgcctacctgcagaagaagggctaccctgaggttgcgctgcac
tttgtcaaagatgagaagacacgtttcagcttggctctggaatgtggaaacatcgaggtg
gcactggaggcagccaaggccctggatgagcgcagctgctgggagcgtctgggtgaggca
gcactgctgcagggacaccaccaggttgtggaaatgtgctaccagagaaccaagaacttt
gacaagctcaccttcctctacctcatcacgggtaacttggccaagctgcgcaagatgatg
aaaatagctgagatcagaaaggacatgagcggccactaccaggcagctctttacctgggc
gatgtcagcgagagggtccgcatcctgaagaactgtggacagaagtctctggcttacctg
actgcagccacacatgggctggatgaggaggcagaggctctaaaggagacgtttgaccca
gagaaagaaacggtgccagaggtagatcctaatgcacagctgctgcagcctcctccaccc
atcaaccctctggacaccaactggcctctgctcacggtttctaagggcttctttgaggga
gccattgctgcaaagggtaaggcagttcagatggctgcagatctggatatggacaccgct
ggagccgagggctggggagacgatgctgagctcactatggacgaagatggcttcactgat
gcccaggatggattaggagatgaaggaattgggaaagaggaaggaggaggttgggatatt
gatgaagatgttgaacttcctccagagttggacgtgccagttggaacaggtggaggaact
gaagatggcttcttcgtgccacctaccaagggcatgagtccaacccagatgtggtgcaac
aactcccagctgccagtggaccacatcttggctggctcctttgaaaccgctttgagactt
cttcacgatcaggttggagttgtaaactttgccccctacaagtcgctgttcatgcagacg
ttttccagaggacgcacctgcttcctggggctgccttcactaccttgtctgcgtggttat
ccccaaaggaactggaaggactgtggagcaaaacaaggcctgcctgctgtggggctgcgc
ctctctgatctgattgcccgcctgcagcagtgctaccagctgaccacgtctgggcggttt
gaggacgctgttgagcgcttcagagccatcttgctttctgttcctctgctggtggttgat
aacaagcaggaaattgcagaggctcagcagctcattacaatatgcagagagtacatagtg
ggcctgactatggagattgagaggaagaagctgccaaaggaaacattggagcagcagaag
aggatttgtgaaatggctgcctatttcacccactgcaatctacagcccgtccacatggtg
ctggtgttgcgtacagccctcaaccttttcttcaaacttcgcaacttcaaaacggctgca
ggatttgcacggcgccttctggagcttgggccgaagccagatgttgcacagcagacccgc
aaaatcttgggggcttgtgagaagaccctgacggacacccaccaactgaactatgacccc
cacaatccatttgatctgtgcgctgcctcctttgttccactctaccgtggacgtcctatt
gagaagtgcccactgtctggagctggctactgccccacttacaaaggccagatctgcaga
gtcacacaggtgactgagattggtaaggatgtgatcggtctgcgtgtgagtcctctccag
ttccgctaa

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