Nothobranchius furzeri (turquoise killifish): 107383498
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Entry
107383498 CDS
T05163
Symbol
hnrnpc
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107383498 (hnrnpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107383498 (hnrnpc)
Spliceosome [BR:
nfu03041
]
Common components
Common spliceosomal components
hnRNP proteins
107383498 (hnrnpc)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CDC27
RNA_pol_3_Rpc31
RasGAP_C
PPP4R2
RRM_5
BUD22
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
107383498
NCBI-ProteinID:
XP_015811640
UniProt:
A0A1A8V4R9
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All DBs
Position
sgr09:complement(24739348..24755489)
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AA seq
317 aa
AA seq
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MDRSSSSSLMASSNVTNKTDPRSLNSRVFIGNLNTLLVTKADVEAIFAKYGKIVGCSVHK
GYAFVQFSNERNARAAVAGEDGRMIVGQVLDINLAGEPKPHRSKTTKRSAGDMYSSSSSF
DLDYDFQRDYYDRMYSYPSRVPAPPPPLSRAVIPSKRPRVSLSGGSSRRNKSSFSSSKSS
QRTSSRTMRADELQTIKRELTQIKSKVDDLLESLERMEKDHIKKSVKNMKTEPGEVTSPP
HSSSKKDDGLKRDRESHNMNNSDEDDDEEDEGDLLEEEEVKSQEREEEEEEEEEEGEHVE
GDDDDDDGDSVNGDDDS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctcatcttcctccagcctaatggccagcagcaatgttaccaacaaaactgat
ccacgctcgctcaactcccgggtcttcatcggtaacctcaacaccctgctggtcaccaag
gcagacgtcgaggccattttcgctaaatatgggaagatcgtaggctgctccgtccacaag
ggctatgcctttgttcagttctccaatgagaggaacgctcgggctgccgtcgctggggag
gacggcaggatgattgttggacaagtgcttgacatcaacctggccggagaacccaaacct
caccggtcaaaaaccaccaagcgttctgctggagacatgtacagcagtagttcctccttt
gatctcgactacgattttcaaagagattattatgacagaatgtactcgtacccatcccgt
gtccctgccccaccacctcccctatcgcgggctgtgatcccgtccaaacggccgagggtc
agcctgagcggagggagcagccggagaaacaaaagcagcttctcctcgtccaagagcagc
cagagaacttcttccagaacaatgagagccgacgagctgcagaccatcaaacgagagctg
acccagatcaagagcaaagtagatgacctgctggagagcctggagcgcatggagaaggac
cacatcaagaagtctgttaagaacatgaagacggagcctggagaggtgacatcacctcca
cactccagcagcaagaaggacgatggtttaaagagagacagggagagccacaacatgaac
aactcggatgaagacgacgacgaggaagacgagggagacttgctggaggaggaggaggtg
aagagtcaagagagagaggaggaagaagaggaggaggaggaagaaggcgagcatgtggag
ggagatgatgacgacgacgatggtgatagcgtgaacggcgatgacgactcgtag
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integrated database retrieval system
