Nothobranchius furzeri (turquoise killifish): 107383517
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Entry
107383517 CDS
T05163
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107383517 (fubp1)
03041 Spliceosome [BR:
nfu03041
]
107383517 (fubp1)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107383517 (fubp1)
Spliceosome [BR:
nfu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107383517 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
107383517
NCBI-ProteinID:
XP_015811667
UniProt:
A0A9D2YME1
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All DBs
Position
sgr09:complement(25547319..25559178)
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AA seq
679 aa
AA seq
DB search
MADYSSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVAAPPTNEFGYGGQKRPLED
AGGYFPMPNLNIDQPETKKVATNDAFSAMVAMGCPPRSTSEEFKVPDGMVGFIIGRGGEQ
ISRIQQESGCKIQIAPDSGGMPDRSVTLTGPPESIQAAKRLLSDIVEKGRPAPSFHHNDG
PGMTVQEIMVPSTKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGDPF
KVQQAKEMVMELIREQGFREQRGEYGSRMGGGDSLDVPVPRFAVGIVIGRNGEMIKKIQN
DTGVRIQFKPDDGTTPERIAQIMGPPDQAQHAAEIISDLLRSVQAGGPPGHGGGRGRGRG
QGNWNMGPPGGLQEFSFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNAPPNSDPNL
KMFTVRGSPQQIDYARQLVEEKIGGPVTPMGGPHGPPGPHGGPGPHGPPGPPGPPGAPMG
PYNPGPYNQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAYYAQYG
QQPQPSMAPAGGAPGTSQPNGQGDPQAPGQSGQTDYTKAWEEYYKKMGQQNQPPQDYTKA
WEEYYKKQDAASQMQGDGNPSGQAAPQAAPAAAAPTSQPGAQPDYSAAWAEYYRQQAAYY
GTPNPQAMGGAPQAPQVRP
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcagactatagcagcgtggctcctccgtcttctaacgctggtggtgggatgaacgat
gcttttaaagacgctctgcagcgagcacgacagattgcagcgaagatcggcggagatggt
gtcgcggcacccccaacgaacgaatttggctacggaggccagaaaaggcccctggaggac
gctggtgggtattttcccatgcctaacctgaatatcgatcaaccagaaacaaagaaagta
gctacaaatgatgccttttctgcaatggtagcaatgggttgccccccgcggtcaacatca
gaggaattcaaggttcccgatggaatggttggattcattattgggagaggaggcgagcaa
atatcacgcatccagcaggagtctgggtgtaaaatacagatcgcacctgacagtggaggg
atgccagataggtcagtgacattgacaggaccaccagaatcaattcaggctgcaaaaagg
ttactgtcggatatagttgagaagggccgtccagctccatcgtttcaccacaacgatggt
cccgggatgacggttcaggagatcatggtgccctctaccaaagcgggtctcgtcatcgga
aagggaggagaaaccatcaagagcctccaggaacgagctggcgtgaagatggtcatgatc
caagatggacctcagaatacaggagcagacaagccactccgcatttcaggagatcctttt
aaagttcaacaagccaaagagatggtgatggagctgatcagagagcaaggcttcagggag
cagaggggcgagtacggttcaaggatgggaggaggagacagcctggacgttccagtccca
cgatttgctgtgggaatagttattggcagaaatggagagatgatcaagaagatacagaat
gacacaggcgtcagaattcagttcaaaccagatgatggcactacacctgagaggatagca
cagatcatgggtcccccagaccaggctcagcatgcagcagagatcatttctgacctgttg
aggagcgttcaagctgggggacctcctggacacggagggggcagaggacgtggccgtggg
cagggtaactggaacatgggccctcctggtggcctgcaggagtttagcttcacagtccct
accatgaagaccggcctaatcatcggaaaaggcggagagacaatcaaaggcatcagtcag
cagtctggagccagaatcgagctgcagaggaatgctccacccaattctgaccccaacctt
aagatgttcactgtcagaggctcccctcaacagattgactatgccaggcagctagtggag
gagaaaattgggggcccagttactccaatgggtggcccgcacggtcctccaggtccgcat
ggtggtccgggtccgcatggtcctccgggaccacctggacctccaggggctccaatggga
ccgtacaaccctggaccatataaccagggacctcctggacctcatggtcctcctgctcct
tatcagcctcagggatggggcaacgggtacccccactggcagcagggacagcctgatccg
aataaagcagcagccgacgccaacgcagcagcgtgggcggcgtactacgctcagtacggc
cagcagcctcagccctccatggcgccagctggcggagctccaggcacgtctcagcctaac
ggccaaggtgacccacaggctccaggtcagagtggacagacagattacaccaaagcctgg
gaggaatattacaagaaaatgggtcaacagaatcagcctcctcaggactacacaaaagcc
tgggaggagtattacaagaagcaagacgcagcgtcccagatgcaaggagacggcaaccct
tcaggccaagccgcgcctcaggccgctccggctgcagccgcgccgacctctcagccagga
gcccagccagactacagcgccgcctgggccgagtactaccggcagcaggcggcttactac
ggcacacccaacccccaggccatgggtggagcaccacaagcccctcaggtacgcccctga
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