Nothobranchius furzeri (turquoise killifish): 107383578
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Entry
107383578 CDS
T05163
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107383578 (sox5)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107383578 (sox5)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
107383578
NCBI-ProteinID:
XP_015811819
UniProt:
A0A9D2YY70
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Position
sgr01:69075152..69253253
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AA seq
788 aa
AA seq
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MLLLSRETDPYSSMLTEPELPQECNRMSSKRPASPYGGTDGEVTMATSRQRVEDDESEGL
GGVIHLPLASYCGKVSPRSPPNRNLDSPLVMEHDGTKGSSLSPYPLHNATSPGKEEGGGG
GRPCSDGGLATGTLGTPERRKGSLADVVDTLKQRKMEELIKNEPEEAPSIERLLSKDWKD
KLLAMGSGHIGEIKGTPDSLAEKERQLMGMIGQLSSLREQLLAAHEEQKKLAASQMEKQR
QQMELAKQQQDQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAA
AQQGFLVPPGFNYKPGCSDPYPLQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSP
GAKQHGGSLPPQANLGTHSPPTNTHPQSDKGRSPPPTNKTKDSEGAQPLNLSAKPKASES
KSPNSPPTSPQVPAAAAATKLGPTGSMKHSAVPSSVGGPPARVSSIADLLSSLSSTAYLN
DHEAVSKAFAEARQMKEQLKGEQQALDAKLASVSNLSLNNGRSDKDKAALESLSQQLKQQ
AEDKFSHAMLDFTMSGDSDGSPSVSDSRIFREARGRSSNEPHIKRPMNAFMVWAKDERRK
ILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTC
LVDGKKLRIGEYKAIMRSRRQEMRQYFSVGQQGQLPLNSAGMVYPSALSMAGMPSPQMPS
EHSSMSSSPEPNANHHQIPNMSGLKGDEPRIKEEELRLDDSNGDVYDDFDYEDEEADYAS
DNENHITQ
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgttgtcgagagagacggacccttactccagcatgctcactgagcctgagcta
cctcaggagtgtaacaggatgtcttccaagcgaccagcctctccatatggggggacagat
ggagaggtaaccatggcaaccagcagacagcgagtggaggacgatgagagcgagggactg
ggcggtgtcatccacctccccctggcctcctactgtggcaaggtgtcccctcgctcgccc
cccaaccgcaacttggacagccccctggtcatggagcatgacggcaccaaggggagttca
ttgagtccttacccgcttcacaatgctacctcaccaggcaaagaggagggtggaggcggg
ggacgaccctgcagcgatggcggcttggcgacgggtaccctcgggacccctgagaggcgc
aagggcagcctggcggacgttgtggacacactgaaacaacgcaagatggaggagctgatc
aaaaacgagccagaagaggcccccagcattgagagactcttgtcaaaggactggaaggat
aaacttttggccatgggctcagggcacatcggagaaattaaaggtaccccagacagcctg
gcggagaaagagcgccagctcatgggcatgattggccagttgagcagcctgagggagcag
ctcctggcggcccacgaggagcagaagaagctggccgcctcacagatggagaagcagagg
cagcagatggagctggccaagcagcagcaggaccagattgcccggcaacagcagcagctt
ctgcagcagcaacacaaaatcaacctcctgcagcaacaaatccagcaggtccagggccag
cttcctccactgatgattcccgtctttcctcctgaccagcggactctggcggcagccgca
gcccagcagggcttcctggtgccccctggcttcaactacaaacctggctgcagtgacccc
taccctctccagctcatccccacaacaatggctgccgctgcagccgccactcctggactc
ggacccctacagctacagcagttgtacgcagctcagctggcggccatgcaggtttcccca
ggagccaagcagcatggaggcagccttccaccccaagctaacctgggcacacactcccca
cccaccaacacacacccacagagcgacaagggccgcagccccccacccacaaacaaaacc
aaggacagtgagggtgcacagccactgaacctatcggccaagcctaaggcatccgagagc
aagtcacccaactcccccccaacttccccacaggttcccgctgctgctgctgccaccaag
ctgggccccactggctccatgaagcacagcgccgtgccctcaagcgttggaggaccacca
gccagagtcagctcaatagcagacttgttgtcctcgctatcatcaacagcctacctgaac
gaccacgaggcggtgagcaaggcctttgctgaggcccggcagatgaaggagcagctgaag
ggggaacagcaggccctggatgccaagttggcctccgttagcaacctcagcctcaacaat
ggccgctcagacaaggacaaagccgccttggagagtttgagtcagcagctgaaacagcag
gccgaggacaagttcagccacgccatgctggacttcaccatgagtggagactctgacgga
tcacccagcgtttcagactccagaatattccgagaagctcgaggtcgaagcagcaatgag
ccgcacataaaacggccgatgaacgccttcatggtttgggccaaagacgaaaggcggaag
attctccaggccttcccagacatgcacaactccaacatcagcaagatcctcggatcaagg
tggaaagccatgaccaacctggagaagcagccatactacgaggagcaggctcgcctcagc
aagcagcacctggagaaataccccgactacaagtacaagccgcggcccaaacgcacctgc
ctggtggacggaaagaagctgcgcatcggcgagtacaaggctatcatgagatcccgcagg
caggagatgagacagtacttcagtgtagggcagcagggccagctgcccctcaactctgca
ggcatggtctaccccagcgccctgtccatggcgggaatgccctccccccagatgccctca
gagcactccagcatgtccagcagccccgagcccaacgccaaccaccaccagatccccaac
atgtctggcctgaagggcgacgagccaaggatcaaggaggaggagctgcggctggacgat
agcaatggcgatgtttacgatgactttgactacgaggacgaagaggctgattacgccagc
gacaacgagaaccacatcacccaataa
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