Nothobranchius furzeri (turquoise killifish): 107383682
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Entry
107383682 CDS
T05163
Name
(RefSeq) laminin subunit gamma-2-like
KO
K06246
laminin, gamma 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04382
Cornified envelope formation
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107383682
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107383682
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107383682
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Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
FAD_SOX
Motif
Other DBs
NCBI-GeneID:
107383682
NCBI-ProteinID:
XP_015811920
UniProt:
A0A8C6LRQ9
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Position
sgr09:17201603..17217763
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AA seq
1128 aa
AA seq
DB search
MEMNWTSVCGLLAAVCLVQVVHSFYSERRCECNGRAQFCQLDATGLRCIECQGNTEGRHC
ERCKVGFYLQGAGLSCTPCNCNPTGSVRAACDSRGRCSCKYGVRGEKCDRCPDGPIRPDG
CLRSQQKRENSGSLSLPCFCYGHSQQCSATRGYSIYNVTSTFSTGPEGWKAATVRGVTPD
DVHFRWSPKHQDLEVISRVSPPIYLHAPEPFLGNQLLSYGQNLSFLLRLDRGVPHPSTND
VVLEGAGMRVSASLGDLRTVIPCGQKISYSFRLDEQLGATWRPQLSSFQFQSLLENLTAI
MIRATFGENGRGYLDNVKLVSARHGEGIPARWVQTCSCPRGHEGEFCELCSDGFRRRVPA
NGVFSPCDPCSCRGGSCDPQTGDCYSADETPGEQSCSVGFYQDRQGTCVRCPCPDGTSCS
LAAGSPEPRCDWCPPGAFGSRCDVCREGFYGDPAGASGVQRPCRPCSCNGHIDTSVVGSC
DRRTGECLRCLNHTSGRSCESCLRGFYHQRLSDACKPCSCDAQGSESEQCEDSGLCRCRP
GFQGLRCERSNCPSCFNPVKIKLDDYEAKLKDLENMFSRKNGAVKPSSGALMDATLRMFE
ELINNLQKKVEELTGMERSLQRQLSSISQNQLTQEQEVLNVDAATEDIRLQQQTWKTKVK
DVQTLMDQMRRSLEDAKAQLRSVEFPLRDAPLTSDQLASLAQTATNLANEHQAKADAIEP
TANEALDDAKKSLDLVQVLMDRENKVKDLTGDLKVLYTQLTSQVKTLENEAMNQSDKARV
ESGTADRMLNDISRIEQSFPPPLKMDVGTMALRLGGLENAVQENISAVEKLQDSVQQSQT
SAEEQLAEGRAAQQEANKLLDRVNIAKSETEIALKSIQNNVDKLDDTLDSLRGFDQQIDD
SKALSDAAIKRLPDINATIQAALSSNAKTQSTLDIVSKGHKNTLGTIDQLQNLINNLEGT
LDSLPPPADVVTEATRLNKESKDLKTNLEGAAADTDSQLEDARHLNATAQEATAAATGAL
SKAFQTKEAVQKVLQDVNQLLASLNQSEVLDEKQVKQLEDSLASAEKEVEDHLRPRLHDM
VQQEAAQRRLLTRINLDIDSIMADIANLQNINSTIPGGCFNSPPIEEA
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaactggacttcagtctgcgggcttctggctgcggtttgcttggtccaggtg
gtgcacagcttctactctgagcggcgctgcgagtgtaacgggagggctcagttctgccag
ctcgatgccacgggtctcaggtgtatcgagtgtcagggaaacaccgaaggtcgtcactgt
gagcgctgcaaggttggtttctacctccagggggcgggactcagctgcacaccctgcaac
tgtaatcctacaggttctgtcagagcagcgtgtgacagcagggggcgctgtagctgcaaa
tatggcgtcagaggagagaaatgtgaccgctgccccgatgggccgatcagacccgacggc
tgcttgcgcagccagcagaagcgagaaaattctgggagtttgagtctgccgtgtttctgt
tacggacacagccagcagtgttctgccacacgtggttactccatctacaacgtcacctcc
accttctccacaggtccagaaggttggaaggcagcgacggtccggggcgtcactcctgat
gacgttcacttccgttggtcaccaaaacaccaggacttggaggtcatctccagagtgagc
ccaccaatatacctgcatgccccagaacccttcctggggaaccagctgctgagttatgga
cagaacctctccttcttgttgcgtttggaccgtggtgtcccacacccgtccaccaatgat
gtggtcttagagggcgccggtatgagagtctccgcctctctgggggacctgagaaccgtc
atcccctgtggacagaagatcagctacagtttcaggctggacgagcaacttggcgccacg
tggagacctcagctttcctcctttcagttccagagccttctcgagaacctcacagccatc
atgatccgggccacgtttggagagaacggtcgtggttacctcgacaacgtgaaactggtg
tcggcgcgccatggagaaggcatcccggctcgttgggtccagacctgcagctgtccacga
ggacatgagggcgagttctgtgagctctgctcagacgggttccggcgcagggttcctgcc
aacggagtcttcagcccctgcgatccctgcagctgcaggggggggagctgtgaccctcag
actggagactgttactctgcagacgagacgcccggtgaacagagctgttccgtggggttt
taccaggaccggcaggggacctgtgttaggtgtccttgtccagacgggacatcctgctca
ctggccgctggttctccggagcctcgatgtgactggtgtccaccaggagccttcggttct
cgttgtgatgtctgtcgggagggtttctatggagatcctgcaggtgcttcaggcgtgcag
cgtccctgcagaccctgtagctgtaacggacacatcgataccagcgtggtgggaagctgc
gaccggagaaccggagaatgtctgagatgtttgaatcacacaagtgggcggagctgtgag
tcgtgtctgagaggtttctaccaccagagactttcagacgcctgcaaaccttgtagctgt
gatgctcaaggctccgagtccgaacagtgtgaggattctggtctctgtcggtgccgaccg
ggtttccagggtctgaggtgtgaacggtccaactgtccttcctgtttcaaccccgtcaaa
ataaagctggatgattatgaggccaaactgaaggatctggagaacatgttctcaaggaag
aatggagctgtgaaaccatccagtggcgctctgatggacgccactctgaggatgtttgag
gagctgattaacaacctgcagaagaaggtggaggagctcacagggatggaaaggagcctg
cagaggcagctgtcgtccatcagtcagaatcagctgactcaggaacaggaagtgctgaac
gttgacgcagcaacagaagacatcagactgcagcagcaaacgtggaagacaaaggtgaag
gacgtccaaacactgatggaccagatgagacgcagcctggaggatgccaaagctcaactc
agatcagtcgagtttcctctcagagatgctcctctgacttcagaccagttggcttctctg
gcacagaccgccacgaacctggccaatgaacaccaggcaaaggcggacgccatagagccg
acagccaacgaggctctagacgatgccaagaagagcctggatctggtccaagttctgatg
gaccgggagaacaaagtcaaagacctgactggagacctgaaggttctctacactcagctc
acctctcaggtgaagactctggagaacgaggctatgaaccaaagcgacaaggctcgggtt
gagagtggaacagctgaccggatgttgaatgacatctccaggattgagcagagttttcct
cctcctctgaagatggatgtgggtaccatggcactcaggctgggtgggctggagaatgcg
gtgcaggagaacatctcagctgtggagaagctgcaggattctgtgcaacaaagccaaaca
tctgctgaagagcaactggctgaaggcagagctgctcagcaggaggccaacaagctgcta
gacagagtcaacattgccaaatctgaaacagagatcgctctgaagagcatccaaaacaac
gtagacaaactggatgacaccctggactccctaagaggttttgaccaacaaatcgatgac
agcaaagctctgtcagacgctgccatcaaacgccttccagacatcaacgccaccatccaa
gcagctcttagcagcaatgctaagacccagtccaccttagacattgtgtccaaaggtcac
aaaaacacactgggaacaattgaccaactacagaacctcatcaacaatctggaggggact
ctagactcgttgccacctccagctgatgtggtgactgaagccacaaggctgaacaaggaa
tccaaggacctgaagacaaacctggagggggcggctgcagacacggactctcagctggaa
gatgccaggcacctgaatgctacagctcaggaggctactgctgcagcgactggagctctc
agcaaggccttccagaccaaagaggccgtgcagaaggttctgcaggatgtcaaccagctg
ctggcctccctgaaccagtccgaagtcctggatgagaagcaggtgaagcagctggaggac
tctctggcctctgctgagaaggaggtggaggaccacctgaggcctcgactccacgacatg
gtgcagcaggaggcggcgcagcgccgactcctgacccggatcaacctggacatcgacagc
atcatggccgacatcgctaacctgcagaacatcaacagcaccatccctggcggctgcttt
aacagcccccccatagaggaggcctga
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