Nothobranchius furzeri (turquoise killifish): 107383760
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Entry
107383760 CDS
T05163
Name
(RefSeq) rab effector MyRIP-like isoform X1
KO
K22237
Rab effector MyRIP
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107383760
Membrane trafficking [BR:
nfu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107383760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_eff_C
FYVE_2
DUF1133
Motif
Other DBs
NCBI-GeneID:
107383760
NCBI-ProteinID:
XP_015812032
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Position
sgr09:29989869..30011237
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AA seq
1286 aa
AA seq
DB search
MMGRKLDLTGLSDNEATHVLQVVQRDMRLRKKEEERLSELKQELDEEGSRCLLLSRQSCF
NQRCCIRCCSPFTFLLNPKGRCRDCSYNVCKACRVYNQRDKAWLCSACQKCRLLKTQSLE
WFYTNVKKRFKRFGSAKVLKTLYRKHLAEHSALSELTEGSACDESICNEDSVSGSDSTFY
RQTEEHSLEETLTVAMRVAEEAIDEAISRAEFDTSTQKKQNEAHYLQEHKGELIEELART
IVQKITSRRNSSAEMRAEYDHKWPSEQNTSLHPHQSNCDQVSGSLKANLWRSHSAFTLDD
CSCTPEQNCLTALKNEASGLAMTAWKSVDRLDNSVLKSPDGNWIALQSAQLSRPSLLTKR
KSLVYSALERESGVVSAYEGLGSDNETKPEADSAWGAVLQEIHRKMTDSKFTSHGHNVTP
LVDPHVCSDDPFSDSEGHWKPIKHLLVHLKKKVPAEIRKPLSSRRTSIIDVNFNLKGGGE
REGVKMAAQPETRKIRKSRKKRSKKKPSSVLDLNRESDPLHPSDAVTPTTPTSEASTPEP
FDLDGDVTGKDFSLNVHQSEGRVSDFDMREGPEKDRSDGETGVMTRQRDMDLGGLTPEEE
EKEKDEEVRCSLYRLVSQSNLTYFSSTKDDLDRVGQSEGEGDTEEEQKSLSNRLFQLEKR
VQAMQFSSTEDELDRMGVEEDENEEDLAVKLCRLANEVNASQFSSTEDELDRVGRGEDEE
EVTDEETLWKLQPDRSQLRDLVSLVRASQFSSTEDELDRVGEKEGEMEQKVKQEIGSEMK
ELWEGAESMGDIDMKMFDLTDETEEMREQKSDENTREDVFDSWKETEDVWDDERDVKKGR
NLLDERVKGNTSAGKEQLCVKDLEVFKPEKVLEPKERQEAHFKTREDAERTEHEIKPEPE
TEPAAKMNDEMEEFIKEGNERERKWKLAARSDEEDLEFDRIISSMLMMTLEDMQVETMKD
TDGKSERRLEEVENSREQERKSVEQRKDASEETEQVSDERTEKIISNQRTRGVRGGNMED
GGQTCLTREKIKDSDQTSPESDLEETRVEGDMMETNAANENIKEVEQSSSPPHGGFLSPE
EFQSDSNMELYQTIQLISSLLEQKYSAASLRSITTEVLKVLNTTEELLQGVDAQNHTWHP
SVSLPPNMDPKTLDQQFSRLEENVYVAAGPVYGLEAELSDLEECARGICSSTSDMELTFL
EEQVAATAARVQQSELQIGNISARIAALKSAGLNVDPQLRVTKARTSSVTPVTLDSSRHM
RRRLPAPPVKGENLLSRIVFAHQSAV
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtcgtaagctggatctgactggtctgtcggacaacgaggccactcatgtgctg
caggtggttcagagagacatgaggctccgcaagaaggaggaagagagactcagtgaactg
aagcaggagctggatgaggagggcagtcgttgtctcctcctgtcgcggcagagttgcttc
aaccagcgttgctgcatccgctgctgctcgcccttcaccttcctgctcaacccgaagggt
cggtgcagagactgcagctacaacgtgtgcaaggcctgccgggtctacaaccagcgggac
aaagcctggctctgctccgcctgccaaaagtgcaggttgctgaagactcagtcactcgag
tggttttatacgaacgtgaagaaacgctttaagaggttcggcagtgccaaagtgctgaag
actctctacaggaaacacctggcagagcacagtgctctttcagagctcacagagggcagc
gcctgcgacgagagcatctgcaatgaggacagcgtcagtgggagcgactcaaccttctac
aggcaaactgaagagcacagcctggaggagacgctcactgtggccatgcgggttgcagag
gaggccatagatgaagccatttctagggctgagtttgacacctctactcagaagaagcag
aatgaagctcattatctgcaggagcacaaaggagagctcatcgaggagctggccagaact
attgtgcaaaaaatcaccagcaggaggaactcttcggctgagatgagggcagaatacgac
cacaaatggccctcagagcagaacaccagccttcatcctcatcagtcaaattgtgatcaa
gtctccggctccctgaaggcaaatctctggaggtcccattcagccttcacactggacgac
tgctcttgtactccggagcaaaactgtctgacagccttaaagaacgaagccagcgggttg
gctatgacggcgtggaagagtgtggatcgactcgacaactctgttctgaagagtccagat
gggaactggatcgccctgcagagtgcccagctgtctcgccccagcctcctcaccaaacgc
aagagcctggtttacagtgccttggagagggagtccggcgtggtgtcagcctacgaaggt
ctgggctctgacaacgaaaccaaaccagaggctgatagtgcctggggagctgtcctccag
gagatccacaggaaaatgacagactctaagttcacctcacacgggcacaacgtcacacct
ctggtggacccccacgtctgcagcgatgatccattttcagactctgaggggcactggaaa
cctattaaacatctgctggttcatctaaagaagaaagttcctgcggagatcaggaagcct
ttgtcgtctcgtaggaccagcatcatcgatgtgaactttaacctcaaaggaggaggggaa
agggaaggggtgaagatggctgctcagccagaaacgagaaaaatcaggaaatcacggaag
aagaggagtaaaaaaaagccctcttctgtactggatttaaacagagaaagtgatcctcta
catccatctgatgctgtgactcctaccactcccacctccgaagcatcgactcctgaacct
tttgacctcgatggtgacgtaacaggaaaggacttttctttgaatgtgcatcaatctgaa
ggcagagtttctgactttgacatgagagaaggaccagaaaaagacagaagtgatggagaa
acgggggtgatgacgagacagagggacatggacttgggtggactgacaccagaggaggaa
gagaaagaaaaagatgaagaggtgagatgcagtttgtacagacttgtttcacagtccaac
ctcacctacttctcttctactaaagatgatttagacagagtgggacaaagcgaaggggag
ggagacacggaggaggagcagaagagtctttctaatagactttttcagttggaaaaacga
gtccaagcaatgcagttctcgtccactgaggacgagctggacagaatgggtgttgaagag
gacgagaacgaggaagatctggccgtgaaattgtgccgactagctaatgaagttaatgcc
tcccagttttcttctactgaggatgagttggacagagtgggaagaggagaggacgaagag
gaggtgactgacgaggagacgttgtggaagctgcagccagacagaagtcagctgagggat
ttggtcagtttggtcagagcctcgcagttttcctccactgaggatgagctggacagagtt
ggagagaaggaaggagaaatggagcagaaagtaaaacaggaaatcgggagtgagatgaag
gagctgtgggagggagcagaatccatgggagacatcgacatgaaaatgtttgatttgaca
gatgaaacagaggaaatgagagaacagaaaagtgatgaaaatacaagagaagatgttttt
gatagctggaaggagactgaggatgtttgggatgatgaaagagatgtaaagaaaggtaga
aatctcctggatgaaagagtaaaggggaatacatcggctggaaaagagcaactatgtgtc
aaagatctggaagtcttcaaacctgagaaagtactggagccaaaagaaagacaagaggca
cactttaaaacaagagaggacgccgagaggacagaacacgagataaaacctgaaccagag
actgagccagcagcaaaaatgaatgatgaaatggaagagttcataaaagaaggcaacgag
agagagaggaaatggaaattggcagcaagaagtgatgaagaagacttagaatttgacaga
ataatcagcagcatgttgatgatgactctggaggacatgcaggtggaaacgatgaaggac
acagatggaaaaagtgagcgaagactagaggaggtagagaatagcagagagcaggagaga
aaatcagtggaacaaagaaaagatgcttcagaggaaacagaacaagtttcagacgaaagg
acagaaaaaatcatctctaatcaacggactagaggtgttagagggggaaacatggaggat
ggaggacagacatgtttaactagagagaaaatcaaagactcagatcagacaagtccagag
tctgatttggaggagacaagagtggagggagacatgatggagacgaatgcagcaaacgaa
aacattaaagaggtggagcagagcagctctcctcctcacggagggtttctgtcaccggag
gagtttcagagcgatagcaacatggagctttatcaaactatacagttaatatcatccctt
ctggagcagaaatattctgcagcgtctctgcgcagcatcaccaccgaggtgttgaaggtt
ctgaacaccactgaagagctgctgcagggagtggatgctcaaaaccacacctggcatcct
tctgtctcgctgccaccaaacatggaccccaaaacactggaccagcagttctccagactg
gaggaaaatgtgtacgttgcagccggtccagtgtacggtctggaggcagagctcagtgat
ctggaggagtgcgccagaggaatctgcagctccacatccgacatggagctgactttcctg
gaggagcaggtggcagcaactgctgctcgagttcagcagtcagagctacagataggcaac
atctctgcaagaatcgctgctctgaagagcgccggcctcaacgtggaccctcagttacgc
gtcactaaagccaggacctcgtcagttacgcctgtgactctggactcctcgagacacatg
agaagaagattgcctgccccgccggtgaaaggtgaaaacttactcagtaggattgtattt
gcacatcagtctgctgtttga
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integrated database retrieval system
