Nothobranchius furzeri (turquoise killifish): 107383896
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Entry
107383896 CDS
T05163
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107383896 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107383896 (exosc4)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107383896 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
107383896 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107383896
NCBI-ProteinID:
XP_015812273
UniProt:
A0A1A8U6U9
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Position
sgr09:34878751..34880310
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AA seq
245 aa
AA seq
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MAGIELLSDQGYRLDGRKATELRKVQARLGVFAQADGSAYLEQGNTKVLAVVYGPHEMRG
SRSRTLHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLFPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALVQMDARLHQDHLEALIEAATTACKGVSKVLDEVVRQHLQEAS
VLTGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatcgagctgctgtcggaccagggataccgcctggatggaaggaaagccacc
gaactgcggaaagttcaggctcgcctgggtgtgttcgctcaggccgacggttccgcttac
ctggaacagggaaacaccaaagttctggctgtggtttacggtccgcacgagatgcgaggt
tcaagaagtcgtactctccacgatcgagccgtcattaactgccagtacagcatggccaca
ttcagcaccgcagaaaggaagaggaggccgcacggagaccgtaaatccaccgagatgagt
ctccacctgaagcaaacgtttgaagctgctgtgatgacccagctcttcccgcgctctcaa
atagacatttatgtcaagattctgcagtcagatggtgggaactacagtgtgtgtgttaat
gcagccaccttggctgtgattgatgctggcatcccgatgcgagactacgtgtgcgcctgc
accgtgggctttgtggatgagactcccctcgctgacctttgctacgccgaggagagcgga
ggagtcagctctctggcgttggcgctgcttcccaggggaggacagattgctctggttcag
atggacgccaggctgcatcaggatcacctggaagcactgattgaagctgcaacgacagct
tgtaaaggtgtgagcaaggtgctggatgaggtggtgaggcagcatcttcaagaagcatcg
gtgctcaccggagagtaa
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integrated database retrieval system
