KEGG   Nothobranchius furzeri (turquoise killifish): 107383969
Entry
107383969         CDS       T05163                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nfu01009]
    107383969 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nfu03036]
    107383969 (kdm5a)
Enzymes [BR:nfu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     107383969 (kdm5a)
Protein phosphatases and associated proteins [BR:nfu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107383969 (kdm5a)
Chromosome and associated proteins [BR:nfu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107383969 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD_UBR7-like PHD_5 PHD_JHD1 PHD_Pygo
Other DBs
NCBI-GeneID: 107383969
NCBI-ProteinID: XP_015812421
UniProt: A0A1A8AXU6
LinkDB
Position
sgr01:complement(72214684..72232006)
AA seq 1741 aa
MSAYAEFVPPPECPVFEPSWEDFSDPLGFINKIRPIAEKNGICKIRPPQDWQPPFACEVR
NFRFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGSKIRFPHVERKVLDLYQLSKIVSS
EGGFETICKEKRWSKVSSRMGFPPGKGTGSLLRSHYERILYPYELFQSGATLTGLQRLYD
EATDGEDVDEGVGEETMEEDEDQEEEDEKDKEKDVEGEVTQTKGQLLPERRSRRLKSERE
NKDPKGLKIFETSPRMVDLEIVSADDGFIKKQRHLKAQAFAIKMRPRKETLEVNFIDLYL
CLVCGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKPREAFGFE
QAVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISS
KEVGSGFPVKDGKRRLLGDEEEYANSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGM
CFSSFCWHIEDHWSYSINFLHWGEPKTWYGVPASAAEKLEAVMKKLAPELFDSQPDLLHQ
LVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPLG
RQCVAHYRRLHRYCVFSHEELLCKMAADPESLDVELAASIFKEMGEMIEEETKLRQAVQE
MGVLSSEQEVFELVPDDERQCHKCKTTCFLSALTCPCCPDRLVCLHHAKDLCDCPLGNKC
LRYRYDLEEFPSMLYGVKTRAQSYDTWAKRVSEALVADQKNKKDLIELKVLLEDAEDRKY
PENSLFRRLREMVKEAETCSSVAQLLLSRKQRHSSRLRSESSRNRTKLTVDELKAFVGQL
YRLPCIISQARQVKELLETVEDFHERAQVALSDETPDSAKLQELLDLGSGLDVELPELPR
LKQELQQARWLDEVRVTLSEPHCVTLELMKRLIDWGVGLAPHHAVEKAMAELQEVLTVSE
RWEDKARACLGARPRHSMVTLESIVLEARNIPAYLPNILALEDALHKAKEWSAKVEAIHN
GSSYAYLEQLESLLARGRSIPVRLDPLALVETQVASARAWRERTARTFLKKNSTYTLLQV
LSPRMDIGVYSNSKSKRRRVKELMEKERGGFDPHTLSDLEESLEEVRDPSTVVAAFKAKE
QKEVNAIHSLRAANLAKMAMADRIEEVKFCLCRKTASGFMLQCELCKDWFHGACVPLPKT
GTQKKVGVAWQSNSKDSKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTE
RAMSWQDRARQALATEELSSALAKLSVLSQRMVEQAAREKTEKIINAELQKAAANPDLQG
HIQTFQQSGFSRATSPRQCMDYDDEETDSDEDIRETYGYDMKDPGEVKPYLFCDEEIPVK
SEEVVSHMWPAATPSFCAEHAYSSASKSCVQNLGTPRKQPRKTPLVPRSLEPPVLELSPQ
AKAQLEDLMMLGDLLEVSLDETQHIWRILQATQPPSEERFLQVLEPDNSLMEKPLKIKLK
DSEKKRKRKLKRAEHHHMLMATAGGVSAMGDIRLSKAKELKRAGLELGLGGKPKKKKLKL
GLEKNREMKQLAKRLAKEEKERKRKEKAAAKVEAIKEGLEKRKEKKILDIPSKYDWSGAE
DSNDENAVCAAKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSCEMAENEDYICVDCSEK
AGSVGGGITVEEVAEESVVVLSTCGGVQSLSSASLPMSSWSSLTHITPAAPGLQQEPGLG
S
NT seq 5226 nt   +upstreamnt  +downstreamnt
atgtctgcatacgccgagttcgtgcctcctcctgaatgcccggtgttcgagccgagttgg
gaggacttttcggatcctttagggtttattaacaaaatcagacccatcgcggagaaaaat
ggcatctgcaagataaggcctccacaggactggcagcctccattcgcctgcgaagttaga
aactttcgcttcactccaagagtgcaaagactaaatgaacttgaggccctaactcgggtt
aaactaaactttctggatcaaatagcaaagttctgggagctgcagggatcaaagattcga
tttcctcacgtggagagaaaggttctggacctctatcagctcagcaagattgtgtcatcc
gaaggtggctttgagactatctgcaaagagaagagatggtccaaagtgtcgagtcgaatg
ggtttcccaccgggaaaaggcactggttccctgctgcgttcccactatgagagaatcctt
tacccttacgagctcttccagtctggagctacgctcaccggactccaacggctgtatgac
gaggcaacggacggggaagacgtagatgagggggttggcgaggaaacaatggaggaagac
gaggatcaagaagaggaggacgagaaggacaaggagaaagacgtggagggcgaagtgaca
caaaccaaggggcagcttcttcccgagaggcgctccagacgtctcaagtcagagagggag
aacaaggaccctaaaggtctcaaaatctttgaaacaagtcccaggatggtcgatttagag
atcgtgtctgctgacgacgggtttattaagaagcagcgtcacctcaaagctcaagccttt
gccatcaaaatgagaccacgtaaggagaccctggaggtcaacttcattgacctttacctc
tgcctggtgtgtggacgcggagacgaggaggaccgcctcctgctgtgtgacggctgtgat
gacagctaccacaccttctgcctcatcccccctctgcaggatgtgcccaagggggactgg
cgttgccccaagtgtgttgctgaggagtgcagcaaacccagagaggcgtttggctttgag
caggcggtcagagagtacacgctgcagagcttcggagaaatggccgacaactttaaatca
gactattttaatatgccggttcacatggtccctacagagctggtggagaaggagttctgg
cgtctggtcagcagcatcgaggaggacgtaatcgtagagtacggagctgacatcagctcc
aaggaggtgggaagtgggtttcctgtgaaagatggcaagaggaggcttctgggagatgag
gaggaatacgccaactctggctggaacttgaacaacatgccggttctggagcagtcggtt
ctcgctcacattaatgtggacatatccggcatgaaggttccctggctctatgttgggatg
tgcttctcctccttctgctggcacatcgaggaccactggagttactccattaacttcctg
cactggggagaacccaagacttggtatggagtaccggcctctgcagcagagaaactggag
gctgtgatgaaaaaattggccccagagctgttcgactctcaacccgacctccttcaccag
ctggtcaccatcatgaatccaaacgtcctcatggagcacggtgttcctgtttacaggact
aaccagtgtgccggggagtttgtggtgaccttccccagagcctatcacagcggcttcaac
cagggctacaactttgcagaagctgttaatttctgcacagctgactggttacctttgggg
cgccagtgcgttgctcactaccgacggctccaccgctactgcgtcttctcccacgaagaa
ctgttgtgcaagatggcggctgatcccgagagcctcgacgtggaactggctgcgtccatt
ttcaaggagatgggagagatgatagaggaggagacgaagctcaggcaggctgtccaagaa
atgggggtgctgtcatcagaacaggaggtctttgagctcgttccagacgatgagcgtcag
tgtcacaagtgtaagaccacctgcttcctttcggcgttgacctgtccctgttgtccggac
cggctggtttgcctccatcatgccaaggatctctgcgactgtcctcttggcaacaagtgt
cttcgatatcgttatgatctggaggagtttccatccatgttgtatggcgttaagacccgg
gctcagtcctacgacacctgggccaagagggtctctgaagctttggtagcggatcagaag
aacaaaaaagatttgattgaactcaaggttttgctggaggacgcagaagacaggaaatac
cctgagaactcgttgttccgtcgcttgagggagatggtgaaagaagcggagacgtgttcc
tcagtggctcagttgttgctcagccgtaagcagaggcacagcagccgccttcgttctgaa
agcagccgtaatcgcaccaaactgaccgtagatgagctgaaagcctttgtgggccagctc
tacaggctgccatgtatcatcagccaggcgcgacaagtcaaagagttactggagactgtg
gaggacttccacgagcgagcccaggtggctttatcagacgagacgcccgattccgccaag
ctgcaggagcttttggatctgggaagcggcctggacgtagagctgcccgagctgcctaga
ctcaaacaggagctgcaacaggccaggtggcttgatgaggtccgtgtcaccctttctgaa
ccacactgtgtcactctggagctgatgaagaggctgatcgactggggggtgggactggct
ccacatcatgctgtggagaaggcgatggcagagctacaagaggtcctcactgtctcagag
aggtgggaggacaaggcacgtgcctgtctaggtgccagacctcgacacagcatggtgacc
ctggagagcatcgtgctggaggccagaaacatcccagcatatctgcccaatattctggct
ctagaagacgccctccacaaagcaaaggagtggagcgctaaggtggaggccatccataac
ggaagcagctacgcttatctggagcagctggaaagcctcctggccagaggtcgctccatc
cccgttcgacttgatccactggccctggtggagacccaggtggcttcagctcgggcctgg
agggagaggaccgctcgcacattcctgaagaagaactctacgtacacgctgctccaggtt
ctcagcccacgtatggatatcggcgtttacagcaacagcaagagcaagcggaggcgggtc
aaggagcttatggagaaggagagaggtggctttgacccccacactttgagcgacctggag
gagagccttgaggaggtccgagacccttcaactgttgtagctgctttcaaagccaaagag
caaaaggaagtgaacgccattcactcgctccgtgctgctaatttagccaaaatggccatg
gcggaccgcattgaggaggtcaagttctgtctgtgtcgaaagacagccagtggcttcatg
ctgcagtgtgagctttgtaaggactggttccacggcgcctgcgtccctttacctaaaaca
ggaactcaaaagaaagtgggcgtggcctggcagagcaacagcaaagactccaaattcttg
tgtccgctgtgtcagaggtcgaggagaccgaggctggagaccattctgtccctgctggtt
tccttacaaaagctgccggtgcgtctgccagaaggagaagctctgcagtgtttaacagag
agagcaatgagctggcaggaccgagcgcgtcaagctctggctaccgaggagctgtcctcc
gctctggccaagctgtctgtgctgagtcagcgtatggtggagcaggcggcgagggagaag
acggagaagatcatcaacgccgagctgcagaaagctgctgccaatccagacctgcagggc
cacatccaaacctttcaacagtccggtttcagcagagccacgtcgcctcgccagtgcatg
gactacgacgacgaggaaacggactcggatgaggacatcagagagacctacggttatgac
atgaaggacccaggcgaggtgaagccctacctgttctgtgacgaggagattcccgtcaag
tccgaggaggtggtcagtcacatgtggccggcagccactccttccttctgtgccgagcat
gcctactcatcagcgtccaagtcctgtgttcaaaacctgggcactcccagaaagcagccc
cggaagacccctctggtccctcggagcctggaaccgccagtgctcgagctgtccccacaa
gctaaggcccagctggaggacctgatgatgctgggagacctgctggaggtgtctctggat
gagacccagcacatctggaggatcctgcaggccacgcagcctccctctgaggagagattc
ttacaagtcttagagcctgacaactctctcatggagaagcctctgaagatcaaactcaag
gattcagagaagaaaaggaaacggaagctgaagcgagccgagcaccaccacatgctgatg
gccactgccggcggagtctcggccatgggagacatccgactgtccaaggccaaagagctg
aaaagagctggtctggaactcggcctcgggggcaaacccaagaaaaagaagctcaaactt
ggcctggagaagaaccgggagatgaaacagttagctaaacgtttagccaaggaggagaag
gagaggaagaggaaggagaaagcggctgcgaaggtggaggccatcaaggaggggctggag
aagaggaaggagaagaagatcctggacattccctccaagtacgactggtcaggagccgag
gactccaacgacgaaaacgcagtgtgtgctgccaagaactgccagaggccatgtaaagac
aaggtggactgggtgcagtgtgacgggggctgtgacgagtggttccaccaggtgtgtgtg
ggggtttcctgcgaaatggcggaaaatgaggactatatttgcgtggactgctctgagaag
gcgggcagcgtgggcggagggattacagtggaggaggtggcggaggagagcgtcgtggtg
ctgtccacgtgcggtggagtgcagagcttatcctcggcatctctgcccatgtcctcgtgg
tcctctttgacccacataaccccagctgctccaggtctacagcaagaaccagggctgggc
agctag

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