KEGG   Nothobranchius furzeri (turquoise killifish): 107384143
Entry
107384143         CDS       T05163                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfu03019]
    107384143
   04121 Ubiquitin system [BR:nfu04121]
    107384143
Enzymes [BR:nfu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107384143
Messenger RNA biogenesis [BR:nfu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107384143
Ubiquitin system [BR:nfu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107384143
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_BICC1_1st zf-C3HC4 KH_2 RING_XB3-XBAT31 KH_DEAH11_2nd KH_PNO1_2nd Prok-RING_4 Mito_fiss_reg zf-RING_5
Other DBs
NCBI-GeneID: 107384143
NCBI-ProteinID: XP_015812711
UniProt: A0A1A8UTJ1
LinkDB
Position
sgr09:complement(43312088..43319977)
AA seq 655 aa
MPSPLFHPEIIDHDVMISSQHGGVALSRETDQESRDEDHQEALRFALDQLSLMAMEKVDC
GVVVVGSGGNGLVDTLDGTQGPGSESCNGVGGGGYVDLQLLEHPSGSRDSPSSCSPSPEY
YGSGGYHMAGSHPMLHGEQSSVLCNRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRA
KTNTYIKTPVRGEDPVFIVTGRREDVEMAKREIVSAAEHFSMIRASRCKAGGAGGGSSLP
GPPHLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPE
NVDRAREEIETHITLRTGTFVDLQGDNDFHTNGTDVSLEGLNSLSGGLGASLWSRATGHH
SAPPPPPPSPPPSIPMSMHHSSSRKMSSSVAYHTHNGGMSSESFSTTRKANEGGSPTSPF
STGSSSAGGGFTFGGDSTPGLPPSDELGFEFSASNIWAPFVNGGAGSKTAGNSQQQPLRR
NSSGLSGGAITPRLSPTLPQDTGVGPLDHPLARRAQSDPLSTLSWLQSGSTGGGSFSGAS
SSGGSSTGYSSCSASSLPGGSPTDSEGGGSGVGLSSGMLSRLKGGPSSGVVGLVGVSPGV
NRDCFVCFESEVTAALVPCGHNLFCMDCAGQICQSAEPECPVCHTPTTQCIRIFS
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgcctagcccattattccatcccgaaattatagaccacgacgtgatgatcagcagccag
cacggcggagttgctctgtccagggaaacggaccaggagtcccgggatgaggatcaccaa
gaggctctgcgcttcgccctggatcagctgtcactcatggccatggagaaagtggactgt
ggggtcgtcgtcgttggcagtggaggcaacgggcttgtggacaccctggatgggacccag
ggtccgggttctgagagctgcaatggtgttggtggaggggggtacgtggatctacagttg
ctggaacatcccagcgggtcgagggactctccgtcgtcctgctctccttccccggagtac
tacggctcaggcgggtaccacatggccggatcgcacccaatgctccacggggaacaaagc
tccgtcctctgtaacagaaaaagaagcgtcaacatgacagaatgtgtgcccgttccgagc
tctgaacacgttgcagaaatagtaggaagacaaggttgtaaaatcaaggccctgcgcgcc
aaaacaaacacctacataaagactcccgtcagaggggaggatcctgtgttcatcgtgaca
ggacgcagggaggatgtggaaatggccaaacgcgaaatcgtatctgcagcggagcatttc
tccatgatccgggcttcccgctgtaaagccggaggtgctggaggaggaagctccctgccc
ggaccacctcacttacctgggcagactaccatacaggtgagagtgccctacagagtggtt
ggtttagtagtcggaccgaagggagcaaccattaagcgcattcagcagcagactcacact
tacatcgtgactcctagccgagagaaagacccggtgtttgaggtgaccgggatgccagag
aacgtggacagagcgagagaggagattgagacccacatcaccctccgaactggaaccttt
gtagacctgcagggagacaacgacttccacaccaatggcacagatgtcagccttgaaggc
ctcaactccttgagtggaggactgggagcatccctctggtccagagctacaggccaccat
tctgccccgcctcctcctcctccatccccaccaccatccattcccatgtccatgcatcac
tcctcaagtcgtaagatgtcctcatcagtcgcctaccacacgcacaatggcgggatgagc
tcagaaagtttcagcaccacccgaaaggccaatgaggggggcagccccaccagtcctttt
agcacaggctccagcagtgcaggggggggtttcacatttggaggtgactcaaccccagga
ctgcctccctcagatgaactgggctttgagttcagcgcttcaaacatctgggcgcctttt
gtaaatggtggagcaggaagtaagacagccggcaacagccagcagcagcctctacgacgc
aacagcagtggcctcagcggtggcgccatcactccacgattgtctccaaccctgcctcag
gacacgggcgtgggccctctggatcaccccctggctcgccgtgctcagagcgaccccctc
agcactctgtcttggctgcagtctggcagcacaggtggcggctccttctctggagcttcc
agctctggcggctcatcgactggctactcctcctgctcggcctcctccttgcccggcggc
tcgcccaccgactctgagggcggcggcagcggcgtgggcctcagctctgggatgctgagc
cgtctgaaaggtggccccagctctggggttgtgggtctggttggcgttagcccgggggtc
aacagggactgctttgtttgctttgagagcgaggtgacagcagccctggtgccttgtggc
cacaatctgttctgcatggattgcgctgggcaaatctgccagtcagctgagcctgagtgc
cccgtctgtcacactccgaccacacagtgcatccgcatcttctcctaa

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