Nothobranchius furzeri (turquoise killifish): 107384177
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Entry
107384177 CDS
T05163
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107384177 (chd7)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107384177 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
Chromo_MIT1
HDA2-3
HTH_CHD1_Hrp3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
107384177
NCBI-ProteinID:
XP_015812753
UniProt:
A0A9D2YNV5
LinkDB
All DBs
Position
sgr09:complement(44286379..44398345)
Genome browser
AA seq
3290 aa
AA seq
DB search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NT seq
9873 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagggatgttgagcttgtttggggatgatgcagggttgttctcagatgga
ttagacagtttaggagactgctttcctcagcagtcagcccctggtcaaaccaaccctttg
gctcaacagaccagttcttcactgacccatgagcacccgggaactaggagttaccaccaa
gggatgctacatggtacagggcctggaccagggcagtccaaattggggcaaatgtatgag
catggttcctacggtggttatgatcaacctggagcccctggagggcgaatgatggcccag
aatggtcctagtcaggggccacagaatgtgaacacagctatgaatggtatggcctcccac
tataacccaaataactctagcaacccccatcatggctatcagggtgatgctgggggagga
agtggggctggagtttggactcagcagcagagcagaacagtgtatcaacaggcatctgca
ccatcagggggtggccccaaccagatgggaggctaccagatgtctcaaggcaattattct
gggatgcaaggtccacccgcgacaagtgcagctcacatgaaccaacactacccttcacaa
aatgtggtgccccctccagctcaggacccatctcactacttaggacatgttgggatgggt
ggggtccagatgagacagcctcagccacaaccacagggctatcccaacatgggccacacg
cctcgatacccacactccccctcacgacaacctccacacacccaccagcaccaacagggc
atggcaccatttgggggtgctcagtaccctggttaccaggcccagtatgctgctatggga
cctgggatgggccagggggctaatgctaatgtcagcgctaacaccagccaggccatggga
tcagggcagcttggccagcggtttagccagggaacgagttcagcaccagggcaacaagga
cagcgatacccccctggaccgcaacaccaacctcagccccatcagacccactctgcctcc
atgcagcagggccagactatgcaccccttaaaccacccccagagcctgccacagccacaa
aaccagccccagtcccaccttgcccccccaactcagggatcttacccctccccttcctct
atgtccccaatgcgggttttgggaactccaactcctcctccacagggaagacctcctagt
gcaggattagctgggtcagaggttgcaggatacacagccctccagtctccacccagtgct
ttggcccatgcacagagaaccccccaaaccccactaactgccacacacccccaacaccag
cagacccacaacatgcctcccagtgcaggtccagtgtatcctggcatgggaccacagcgt
ggtcctcaaatgggaccaaacaggcttcagcagcagccaggtcctcttgaagcctcagtc
acccagggaggggaccagcggctgctccagacccagcagcagacctctcgaggtggacag
cctatgcagcctgctcccttgggtttccagggtccacctattggtcaacatggagcctct
gcccccacccagggcttagctccacccacacagaacactcaaactcagcacacacatttg
cccccacacccccaccacctgccgagcacgcccccttcctccaaccaggcctcccaccca
tgggcacctccacctcctggctcccaccccctctcctcaccccctcttaccccacagaaa
gtgcctcacatacagcattccccctcagacctgtcaggtgatgcctccaggatggttcct
gacaggccaacaattggcaccggagcccccggccagcctatcagcacagagaaccctagt
gatcaggagaccaagccaaaaaagaagaagaaaaagaaagcaaaagtagtagatgaagag
ggaggcaaaaaagcaacgagggaaggaggagatgacaacgtaaagttggagtttcttgga
gcaggaagtgacattggtgaacaggttactggcacaggaattgttgaaggaagttcaccg
ctggtggaagggaagaaaaagcggaaaaagaaaccaaaggagaagactgagggcaaggag
cccaaagagcccaaaaccccgaagacacccaaaacacccaagactcccaaagagcccaag
gagaagaaagccaagagcaccacgcccaaggtcaagactcctaagaaaaccagcagtaaa
aaggtggaatcagagggtggggctagcaccgctaagaaggattccaagaggaagagagag
ttgtcgggtggcgacgatgtggaggtgaagtctccactgccctctcctcctgaagaagag
gatgatgatggcgtacagaagcgtcgttcgagtcgtcaggtgaagaggaagaggtacacg
gaagatctagagtttaggatctctgaggacgatgacagcggagatgactcgccagcaccc
aaatctccatcctccttgcaacaacaggatgtggctgaggctgaagggcctgttgtggag
aagatcatgggaatgcgcacctctaagaaacagctggagtcgggggaggaagtggaggtg
gaggagttctacgtcaagttcaagggcttttcttacctccactgtcgctgggcagagctg
gaggagctggagaaggacaagagaattcaccagaagattaagaggtttagggccaaacag
ctacttaacaactttataactgagatggatgatgagccttttaacccggactatgtagag
gtggaccgtgtcctggacgtttcagagagcacagatgaaaacggagaggtggtgacctta
tatttggtgaaatggtgcagtttgccttacgaagacgccacctgggagctgaaggcagac
atcgaccaatccaagatagatgaatatgaacgcatcgcagcacgcacacccaacactaac
agagtggatcggccttctgcagctgactggaaaaagctggagagctccagagattacagg
aacggcaacgcactcagggaataccagctcgaaggcctcaactggctgactttcaactgg
tacaactcacggaactgcatcctggctgatgaaatggggctcgggaagaccatccagtcc
attacattcctctatgagatatacatgaagaacattgaggggccgttcctgatcatcgcc
ccgctctccaccattcccaactgggagagggagttcaggacctggacagagctcaatgtg
gtggtctaccacggcagccaggccagccggaaaaccattcaggcctacgagatgcactac
agagatgcacagggtaaggtaataaagggcgtgtatcgtttccatgccgtgataacgaca
tttgagatgattctcgccgactgtccggagcttcgcagcatcccatggcgctgtgtggtg
atcgacgaagcccatcgtctcaaaaaccgaaactgcaaactactggagggactcaaaatg
atggatatggagcacaaagttctgttaacaggaactcctcttcagaacacggtggaggag
ctttttagcttacttaacttcctggaacctgagagattcccatctgaacagaccttcatg
actgaatttggagacctaaagactgaagagcaggtccagaaactgcaaggcatcctgaag
cccatgatgctgagaagactgaaggaggatgtggaaaaaaatcttgcccccaaggaggag
accatcatcgaggtggagctgacaaatatccagaagaaatactatcgggccattttggaa
aagaatttctccttcctctccaaaggaggtgcaggtggagggggaggaggaggaggagga
ggggggggagctaatgttcctaacctcctcaacaccatgatggagctaaggaaatgctgc
aatcacccctacctcattaacggagcggaggagaagatcattgaggagttcagggactct
cactttggtaggacggactttcctgagatgggtcttcaagccatgatccaggctgccggt
aaactggtgctgatcgacaagctgctgcccaaactgaaggccggtggacaccgagtcctg
attttcagtcagatggttcgctgtctggacattctggaggattacctcattcagaaacgg
tatccatatgagcggatagatggtagagttcgtggtaacctgcgacaggcggccattgat
cgcttctccagaccggactcggaccgtttcgtcttcctgttgtgtaccagagccggtgga
ctcggcatcaacctgactgcagcagatacgtgtatcatttttgattctgactggaatcct
cagaacgatcttcaggcgcaggcgaggtgtcatcgtatcggccagtccaagtccgtcaag
atctaccgtctgatcaccaggaacagctatgagagggagatgttcgacaaggccagtctg
aagctggggcttgacaaggccgttcttcagagtatgagtggacgagagaacgcaaacagc
ggggtccagcagttgtccaagaaggagatagaggacctactgagaaagggagcctatgga
gctctgatggatgaggaggacgaaggctccaaattctgtgaggaggacatcgaccagatc
ctccagagacgaacccacaccatcactatcgagtcagagggcaaaggttccacgtttgct
aaggccagctttgttgcaacaggaaaccgaacagacatttctctggaggatccagacttc
tggcagaaatgggccaagaaggctgagctggatatggatgccatcaatggacggaacacg
ctggtcatcgacactccgagggtgaggaaacagacgcgccactacagcagcgtcaaagag
gatgaaatacttgagttctccgagctggagagcgacgatgatgaacccagcaagccctcc
accaaacagcgacgacctcaggacaaaacccagggttaccctcgatccgagtgcttcaga
gtggagaaaaacctgctcgtctacggttggggcaggtggagtgacatcctggctcatggt
cgcttcaagcgcccgctaaaggaggcggatgtggagaaaatctgcagggctctcctggcc
tactgcctgctgcattaccgtggagacgagaacatcaaaagtttcatctgggacctgatc
accccgactgaagacgggaccaccaagacgctcaccaatcactcaggtctctccacacct
gttcccaggggcagaaagggcaagaaggggaagctgacgtctccagttccacagactccg
cgagccgattggctggccagctgcaatcctgaccacttactgcaggaggacagctacaag
aggcacctgaagcatcactgtaacaaggttctgctgagagtgagaatgctgtattatctg
cgacaggaagtcataggcgaccaggccgagcgcatcctggaaggagctgactccagcatg
ttggacgtctggattcctcagccgttccatgctgaggtcccagctgactggtgggacagt
gaggctgacaagtccctgctcattggcgtcttcaaacacggctatgagaagtacaactcc
atgcgcgctgatcctgccctgtgtttcctggagagagtgggcatgccagacgccaaagcg
atcgccgctgagcagaggggcgctgacatgatggcagatggtgttgaaggtgaggatgaa
gatccagagtacaaaccgctgcggatgccttttaaggacgacatggacgactttaccaac
tctccactggatgacaaagaagatgctgtggagggtgagactgaagttaaatcaggcgaa
aatggtctaagtgcaccaacattgggcggagcttctggctcaaacgagcgactctattgg
ccagcagcctcggccctgacagctcggctgcgtcgtctaatcacggcttaccaacgctcc
aaccgcagagagcagctccgccaggaggcactcagcagacccgatggtcgccgccggcga
cgtagggagttcctgccttccatcgccatggttcctgaaaccggaggtggagcaacgttc
atccaagatggctcagggatgttcataacagaaggaagcccatatttggctaaaggaggt
gcctactttgccaagagtggtcagttcatgccagaggcttcgccggtgatgaccgccagt
tctctgatgtctgaaggagtcatgtattataaagagaggagacaaagatggacacgtcgg
gaggaggctgatttctatcgagtcatctccacctttggagtcgtttttgacaccaagcgt
cagaggtttgattggactcagttcagagctttcgcccgactggacaaaaaaactgacgag
agtttggagaaatattactactccttcatcgccatgtgtaagcgggtctgcaggatgcag
gtcaagactgaaacagaacttccagacccaactctgattattgaccccatcacagaggag
cgtgcctctcgcacgctttaccgcattgaacttctccgccgcatcagagagcaggtcctt
cctcacccgctgttgactgagcgcctcaagctctgtcaaccctccccagacctcccagag
tggtgggagtgtgggcgccatgatcgcgacctcctcctgggggcctccaagcatggtgtg
agccgtacagattaccatatcctaaatgacccaacgttgggctttctggaggcccaccag
cgtcacaccagtcagcgaggggccagcgttggcatgggagccatgggagagcccatcaga
gttgggttggcatctttagaaaccacctctgctccacttctcactcctgcagagctagca
agtgctgcagctgctgccagaatggctgttgatgcagctgaagaggaagaggatgatgtg
aaggaggtgaagccagaggagggtaaactacaaatggaggtaaagatggaaacagcggga
gaagacaccaacatcattccaagtaccaagactgaaacccttactgaagtaaaagagaac
gagggaggggatggagaagtgacggacaagactgttggatcaccgattaaggagattaaa
acagaagtcctgccaaaggtagaagctgaagcagaggagcagagtaaagaagacaagagc
ttgaatttaaccagtgaccaaaataaagagttgaccgtggagaaaagtagctcatgtcct
aaagattgtctgagcatccagaatgacactgaagtcgtgcctccaggactcccagactcc
tctcctgatgcacagccgggccccaagactgcagaggaagatggagaggagagggaagct
ccagagtctcttaaatctccaaagtctgcagacacactgaagagcccagaggaggaagag
gaggagaggctggatgaggacgacaaatcggagaaatcctctcaggctgaagcgagcaca
gagcagaagaactttgatgaggagagtattgcttctctgagcacatcagttcgagacgag
acccgagatggtttctgcgctgacgacctgactgaaacatctgctctccaggctctgcag
gaacgaacctacggcttctcgttctggcctaaagaccgagtgatgatcaataggttggat
aacatctgcgacgcagtcttgaagggcaagtggccggtcaacagacgccacatctttgac
ttccctagcaacatcttaccgggtcatgggtccacagccaccacggcggctgtagctatg
atgagcgagagcccgctgcagaggcgaagcctggccgagctggccatggctggtctccat
acgccgtacagtgggagtgaggataaaacgcggtcactgcaggttcgtgaggaggctctg
agtttgacggtgcctcggcagaggaggaggagacggaagaagattgagatcgaggcggag
agagcggccaagaggcgtaacttgatggagatggtggctcagctgagagaaagccatgct
gctgcagaatctcagaatcaggctatagacctcactaagggtgtgcaccatcaccacaag
gcttctcccacattgacgggcttccccagtgccttggtgacgaccccctccctcaaagcc
caaatggatttgcttcagcaagtcccgccctctgcacaccgagctaacggctcgctggaa
gctgacctgcccatcattaggaggaggcggggccgtaggaaaaatgtggagggcctagag
ctgctgtttatggccaacaagagagcgggaggggaggatgctgatgggacaaaggtttct
ggtgtagagggggttcatgaggccacccattcccacagacccctcagtgtccccgagcag
agccccaacgccaggtctctgacctctggcagcctggaggaggaggaggctgctgtttcc
agcaaagatctgggagagtggctgaggcagcacccgacctacaccatggacatgcctgga
tacacaccaaagagcgaggagttgctgctctctcagttctccaaacccaaacaaaagcgt
catcgctgtcgaaacccaaacaagatcgacataaacaccctgactggggaggagagggtg
cctgtggtcaacagacgaaatggacgaaagatgggcggtgccatggctcctccaatgaag
gagcttcccaggtggttactggagaacccagagttctccattgctcctgactggactgac
atagtcaaacagtctgggttcctcccagaagccatgtttgaccgccttctgacaggtcct
gtagtcagagaagagggcgtgcgtcgtcgggggcggcggcctaaatctgagatcgtaaaa
gcagctgcagccgctcaggcagccgccgctgcccaggctgcacaggcgtctctggccaca
actgcttccactgcaggaggcatcaatcctctgctgctgaacagtctgtttggagggatg
gacttgtcttctctccagagcctccagtctctgcagttggccgctggtctgatggccttc
cctcctgctgaccccaagcaggctgcctccatgctgccccttatgctgcctggtatggga
ggcctgcctaacatggctgccgccctccccaacatgttcagccttggagggctctttggc
agtaacctggccgcggccgctgctgcctctacagcgtccaactccgtctccactgctgca
gtcaacaccaacggcatggcaggaggagagggaggtaacggtgaggtgaggacaaagaga
aagagagaggaggaggaggaagacaaggaagagggagaagactttgacgacgggggagag
gaggacgaggggggagaggggaatgaggagggagtgaagaaggccaagaagagggagggg
gaggaaggttcagagaaactggaaaaacctgccagtgatgtcacagctgcttctaagata
tcagctactgatctgtcagcagaggtgtccatcaacggggacaccgcctccctgctggct
gcagcgggcatgtccgccaactccctggcatttaacccattcctcctctccaccatggcc
cctggcctcctctacccctccatgttcctccccccaggcctcggaggactcagcctgcca
ggatttgccacagcctccacccttgctgagctgcagagtgccatggctggagcgatgggg
gacagcgcctccaccccgaatcctctgagagacaaggatgaggacaagaaggacagcatg
aaatctgcaggagaggaggagtgtgaaggaagggacttggctgagaaagggggagagact
ggaggagaggctgatcctccagctctagaggaaggaggtgtggaggaggaggcagtagca
gcagtgtctcctcagaagggaacaagtgactga
DBGET
integrated database retrieval system
