Nothobranchius furzeri (turquoise killifish): 107384230
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Entry
107384230 CDS
T05163
Name
(RefSeq) leucine-rich repeat-containing protein 16B-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107384230
Membrane trafficking [BR:
nfu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
107384230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Sec66
Motif
Other DBs
NCBI-GeneID:
107384230
NCBI-ProteinID:
XP_015812846
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All DBs
Position
sgr09:complement(48547436..49106230)
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AA seq
1406 aa
AA seq
DB search
MASKESTAAGFVNVSRDITESIRKMLDKQVIKFVRAIKQETRSGKSEDRILVLATWRLYL
FAVKVPTKMEVTFNFLEIRAMNTYPEHQVIIDTDKTTYNLRLQTQDQVDQMVSHINYALS
RVFNNSIYAPPICRAEEELPDGSHKFSPNSESSPLEPPKTCGGFSETYAALCDYNGIGCK
EEVQWDVDTIYHSQDNREFNLLDFSHLDSRDLAVIVTSIAYNTWFTKLYCKDMRIGSEVV
DQVLHTISKSNSLEELTLENAGLKPDFPQKMASALSENPASVIHSLSLAHNTLDNQGVSN
LIQQVCRLNKGLRLLNLSKTSLSSKGVVSLSQALCSSDDYSNSLLHLDLSKNPGVLSGED
ATNLYLFLAQPNCLVHLDLSGTDCTVDSLFGALLRGCCADLSYLNLSKNSFSHRKARDSL
PSFRQFFSSAFSLTQVSLASMKVPPDSLRALFLGLSNNPHISDLHLDISSCELRSAGAAV
IQELFPRVSCVGTLDISDNGLDADLLAVIPALSRHPSLKHLMLGKNFNIKGRGLEEILQK
LVHLVQEEECALQSLSLADSRLRQRGTVLVNALGSNACLRKVDLSGNLLEDSGAKMLSKA
LQINTTLRSVTWDRNNTTATGFQDVARALEHNFTLQYMPLPFCDITQAYRSAPEKTEQAL
AKIQRALLRNNQTQRFSQKQALRLHQGLVTSTAEQVMERLCVRVQQQVCVLKGCEDGEEV
QTARQILKEARNSRALYPSLCELAHVLSVDGPVKQRLDTLAGELAKAADKELQVVVDSMV
SLCRELCPMSCSAAERLSPPLSSISEQVSIPRTTIRCALMERAAEDINRALEEVKLSVVS
YLTNSIVDQILQELYTTHKTLLRQVSQAKRWDDVGTGRRTVRQSRLVEPLEFPDEDFGVN
LGIDTMAIKKRSSRTRRIRPVSTRLSLGDEPSPSPTPSAPSHSVSLTHSASWECLSTLPT
NGSPLHHVTHVRPRPPRRHRAMNLSPESHSAENGAVSMLEDGLPDFYSKRVLPDSQLSSL
HQAQSLRRKKRRSVLSIFSGFRKNRNSTFSVQDSDGASENVYSMIQHPKEMGRPESAVPG
PNGAMPSPRSTQGALVYGLRAASPPCPIQRQSTDLVSMVYSCIGAEIEDSDSSSTCDIKE
DNTDGSNAISDAPTDTRSNGHVASSKQQTDRQMETDRQERVVPLMDARTETAEDVQSTGA
GSVGPCGLRPEPPPPSSKSVLAVMKQRHLQESLEETGRLEGEDQSEKMQEEKQRGRGPKG
QHPLIPKKPSIDLQRDRSPDKTKTSPTTSASSEDEQTSNQRSSPPIAQDKLPNEARSPAA
PATEPADPVIIRHGEDRGRNGCPASHHTRKSNSFDIGMDQDTPYDLDRSSDRRFPVNKSC
FPQYRNRSLDYPAGTGCYEGGDRDAL
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaaggagagcacagcggctggcttcgtcaacgtgagcagggacatcacagag
agcatcaggaagatgttggacaagcaggtcatcaagtttgtgcgagccatcaagcaagag
acccggagcggcaagtctgaagacagaattctggtcctggcaacatggagactgtatctc
tttgctgtcaaagtgcccaccaagatggaggtcacgtttaacttcctggaaatcagagcg
atgaacacctacccagaacaccaggtaatcatcgataccgacaagactacgtacaatctg
agactacagacccaggaccaggtggaccaaatggtcagccacatcaactacgccctctcc
agagtcttcaacaactctatttatgctccacctatctgtcgagcagaggaagagctgcca
gatgggagtcacaagttctcaccaaactccgaatcatcgcctttagagcctccgaaaacc
tgtggtggattttctgagacgtacgctgccctttgtgactacaatggaattggctgcaag
gaggaagtgcagtgggatgtagacacaatctaccactctcaggacaacagggagtttaac
ctactggatttcagccatctggacagcagggacttggcagtgatcgtgacatccattgct
tacaacacctggttcaccaagctgtactgcaaagacatgcgcatagggtcggaggtggtg
gaccaggttcttcacactatcagcaagtccaacagcttggaggagctcacgctggagaac
gccggacttaaaccggatttccctcagaagatggcgtcggcgctatcggagaacccagcc
tctgtgattcactccctcagcctggctcataacacgctagacaaccaaggcgtctctaac
ctgatccaacaggtctgccgcctcaacaaaggtctgcgcctcctcaacctctccaagacc
tccctctcctccaaaggtgttgtgtctttgtcccaggctctgtgctcaagtgacgactac
tccaactctctgctgcatctggatctaagcaaaaacccaggagttctgtccggagaggat
gccacaaacctgtacctgtttttggcccagcccaactgcctggttcatttggacctgtct
gggaccgactgcacagtggactcgctgtttggggctttgctgcgggggtgctgtgctgac
ctctcctacttgaatctgtccaagaactccttctctcacagaaaagcgagagactctctg
ccctccttccgtcagttctttagctcagcgtttagcctgacccaagtcagcctggcctcc
atgaaggtcccccctgactcactgagagctctattcctgggtttgtccaacaaccctcac
atctctgatttacacctggacatcagcagctgtgagctcaggtccgccggtgccgccgtg
atacaggagctgtttcctcgggtttcctgcgtcgggactttagacatctctgataatggt
ttagatgctgacttgttggccgtcatcccagcgctctcccgacacccctccctcaaacac
ctgatgttgggtaaaaacttcaacatcaagggcagggggctggaggaaattctgcagaaa
ctagtacatttggtgcaagaagaagagtgtgccctgcagtccctctccctggccgactcc
aggcttcgtcagcggggcaccgtgctggtcaacgctctcggctccaatgcctgcctgcgg
aaggtggacctgagcggcaaccttctggaggactcgggggctaaaatgctcagcaaagcc
ctgcagataaacacaaccctcagaagtgtgacgtgggatcgcaacaacaccaccgcaact
ggcttccaagatgtggcgagggcgctcgagcacaactttaccctgcaatatatgcccctc
cccttttgtgacatcactcaggcgtatcgcagtgcaccagagaagacggagcaggccctg
gccaagatccagcgtgcactgctgaggaacaatcagactcagcgtttctctcagaagcag
gctctcaggctgcaccaaggcctcgtcaccagcaccgccgagcaggtgatggagcgtctg
tgtgtgcgggtgcagcagcaggtttgtgttctgaaaggctgcgaggatggggaggaggtc
cagacagccagacaaatcctcaaggaggctcggaactcgagagctctgtatccgtctctg
tgcgagctggcccatgtcttatcggtggacgggcccgtcaaacagcgcctggacaccctg
gctggagaactggccaaggctgctgacaaggaactgcaggtggtcgtggactcaatggtg
tctctttgccgcgagttatgtcccatgtcctgctcagctgcagagagactcagcccgcct
ctctcgtccatctcagagcaagtttctattcctcgcaccaccatccgctgcgccctgatg
gagagggcggccgaggacatcaacagagccttggaggaggtgaagctgtctgtggtctcc
tatctgaccaactccatagtggatcagatcctacaggagctctacaccacccataaaaca
ctgctgcggcaggtgtctcaggcaaagagatgggacgacgtcgggacaggcagacgcact
gtcagacagtcgagactggtcgagcctctggaatttcctgatgaggattttggcgtcaac
ctgggaatagacacaatggcgatcaagaagcggagctccagaactcgaagaatccgcccc
gtctccaccagactgagtttgggtgacgagcccagtccctcccctacaccgtccgctcct
tcccactctgtctctcttacccattcggcatcatgggaatgcctttccaccctccccacc
aacggctcacctttacatcatgtgacccacgtcaggccacgcccacctcggcgacaccga
gccatgaatctttctcctgaatctcatagtgcagagaatggagcagtcagtatgctggag
gatggactgcctgacttctacagcaaaagggtccttcctgacagtcagttgtcatccctc
catcaggcccagtcactgaggaggaagaaaagacgcagcgtcctgtcgattttctctggc
ttccgaaagaatcgtaactccaccttctctgttcaggactcagatggagcctccgagaac
gtctactccatgattcagcaccctaaggagatggggaggcctgagagtgctgttcctggg
cctaacggggccatgccttcacctcgatcaactcagggagctcttgtttatgggttgagg
gctgctagccccccctgtcccatccaaagacagtccacagaccttgtcagcatggtctac
agctgtatcggagcagaaatcgaggactcggatagcagcagcacctgtgacatcaaagag
gacaacaccgatggctcaaacgccatctcagatgccccaacagatacccggagtaatggc
catgtggcgtcctccaaacaacagacggacagacagatggagacagacaggcaggagagg
gttgtccctctgatggacgcacggacagagacggcggaggacgtacagagtactggtgct
ggtagtgtgggtccctgtggactgagaccagagcctcctcctccaagcagcaaatcggtt
ctggctgtgatgaaacagagacacctgcaggagagtttagaagagacaggaaggctggag
ggagaggaccagagtgaaaaaatgcaagaggaaaagcaaagagggcgcggaccaaagggg
cagcatcctcttattcccaaaaagcccagcatagacctccagagagaccgctctccagac
aaaaccaagacttcgcccaccacttcggccagttcagaagacgaacaaaccagcaaccag
aggagttcgcctcccatcgctcaggacaagctgcccaatgaggcgagaagcccggcagcg
cctgctacagagccagccgatccggtcatcatcaggcatggtgaggacagaggacgtaat
ggatgcccagcgtctcaccacaccaggaagtccaactcattcgacataggcatggaccag
gacaccccctacgatctggacaggtcctcagatcgcaggttccctgtgaataaatcctgc
tttccccagtacagaaacagatctctggactacccagctgggaccgggtgttacgaaggt
ggtgacagagatgcattatga
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