KEGG   Nothobranchius furzeri (turquoise killifish): 107384271
Entry
107384271         CDS       T05163                                 
Symbol
wdr48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    107384271 (wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nfu03400]
    107384271 (wdr48)
DNA repair and recombination proteins [BR:nfu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     107384271 (wdr48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_Vps41 WD_LRWD1 WD40_RFWD3 Beta-prop_ACSF4 Beta-prop_IP5PC_F WDR54 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 WD40_like RAWUL Beta-prop_VPS8 Tfb2_C
Other DBs
NCBI-GeneID: 107384271
NCBI-ProteinID: XP_015812912
UniProt: A0A1A8U9G3
LinkDB
Position
sgr09:complement(50022805..50036166)
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHSDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRTTDPPPAIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCTTPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTRIN
PMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSANDKPGEQEKEEDMAMLAEEKIELMCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggctacgcatcacagacaaaatgctgctgggcggaggaaagtgcaggtatcgtacgtt
attagagacgaagtggagaagtataatcgaaatggggtgaacgccctccagctagaccct
gctctgaaccggctcttcaccgccgggagagactccatcatccggatatggagcgtctac
cagcacaaacaggatccttacattgcctccatggagcatcacacagattgggtgaatgat
atagttctctgttgcaatggaaaaacattgatatcagcttcatctgatacaacggtcaaa
gtgtggaatgcacataaagggttttgcatgtcaacattacggacacacaaggattatgta
aaagctttggcgtacgctaaggacaaggagctggtggcgtcagctggtctggaccggcag
atctttctttgggatgtaaacacactaacagcgctcacagcttccaacaacactgtcacc
acgtcgtcgctgagtgggaacaaggactcgatctacagcctagctatgaaccagatgggt
acagttattgtttctggatccactgaaaaggttttgagagtgtgggatcctcgaacttgt
gcaaaactaatgaagctaaaaggtcactcagacaacgtcaagtcgttgctgctgaatcga
gatggcactcagtgcctatctggtagctcggacgggaccatccgcttgtggtcacttggc
cagcagaggtgtattgccacctaccgtgtgcacgacgagggggtgtgggccctgcaggtc
aatgaagcttttacacatgtttattctggaggcagagacaaaaagatttactgcactgac
ctgcgtaacccagacatcagagtgctcatctgtgaggagaaggctccggtgctcaaaatg
gaactggacagaaccactgacccacctccagcgatctgggtttccaccaccaagtcatct
gtcaataaatggtctctaaaaggaatgcacaacttcagatcatcaggagagtacgacaac
gactgcaccacccctctgactccactgtgtactcaaccagaacaagtcatcaagggaggg
gccagcattatacagtgccacattctgaatgacaagaggcacatcctcaccaaagacact
aacaacaacgtggcattttgggacgtgctaaaggcttgtaaaggtgaagatttgggcaaa
gtggagtttgatgaagaaattaaaaagcgcttcaagatggtctacgtgccaaactggttc
tcggttgacctgaaaactgggatgctgaccatcaccttggatgagagtgactgctttgcc
gcctgggtgtcagcaaaagatgcagggttttcaagttctgatggatccgacccaaagttg
aacctcggtggattgctgctccaagctctgctggagttctggcccagaactcgtatcaac
ccaatggatgaggaggagaatgaggtgaaccacgtgaacggagagcaggagaaccgggtg
cagaaaggaaacggatatttccaggttcctcctcacacaccagtcatctttggagaagca
ggagggagaactctatttaggctgctatgtagagattcaggtggagagactgagtcgatg
ctgctgaatgagacggtcccacagtgggtcattgatataactgtagataaaaatatgccc
aagttcaacaaaattccattctacctccagccccattcttcctctggtgcaaaaacgcta
aaaaaggaccgcctctcggccagtgacatgctgcaggttaggaaggtgatggagcacgtc
tacgagaagatcattaacctggacaacgagtcgcagaccaccagctcctctgccaacgat
aaacccggagaacaggagaaggaggaggacatggccatgctagctgaggagaagattgag
ctaatgtgtcaagaccaggttctagaccccaacatggacctgcggacagttaaacatttt
atctggaagagtggaggggacttgacacttcactataggcagaagtccacatga

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