Nothobranchius furzeri (turquoise killifish): 107384331
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Entry
107384331 CDS
T05163
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107384331 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107384331 (uimc1)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
107384331 (uimc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
zf-WRNIP1_ubi
Prp3_C
PRP21_like_P
Motif
Other DBs
NCBI-GeneID:
107384331
NCBI-ProteinID:
XP_015813031
UniProt:
A0A8C6NQG0
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Position
sgr09:51833311..51849879
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AA seq
972 aa
AA seq
DB search
MALRKQLSRNIFSDDQQTEENTQEDESADDGDSGKEFTSLLLAKSPARERRRNERANKPK
EEMTEEEMMDLALRLSEKEASDVAFQQEQEKEAVMKAIQESMVGQTQPCLNSPSKTDRSH
RLSCRRRLSYREGLSAVDPGAPVDGCTAENDLKSETKGPGDENVSKKRKRSAGSPELEVP
PSFQSQDSPCSLESLPAPLHSPQSSDSTQIDDAHLQKSPVFALTGRNVALHIDRLKQELV
DTCRSSGFVLCSQDSLTISEKSAQPRSPTFPRSNPTSFPKSPFFSKMVQGEDGETEPSPE
FSSKGASPSACGLPNWETAVFGFSSQDSLTPSVTSFCPKSPVFPRSPNPPNAPLLLEGLS
ASRSNGRRRRRWNDEPPMSPVFGKTPSVTNVQEKSLNPSAAGCNREEELHHWQMKDPKPD
GSPRPSRSEELNLKAQMSAESEPPSQMALVWSDEDEQDEADQTFLVSPVFPEERAAPQAE
HRTASQNHKAAGSPGEPGPDSSQETGKRDLELHKRTLPSTSTSRLQISITEEELSPTSRQ
EAAGNTPPPEESLNQPTIHYYWGVPFCPQGLDPDRYTQVIVAQMEVYEKSLKQTQRVLLR
KAEWGEGIQPQSEKSPSPDAPTPSPQPQVPPRRGLRRRGRKRNDAVEEEENEEKNDGDEE
QMETDDCDVCPETQLSDDGTQDLIVVTDGAEETHAELQEGEAIPQEGSPIRDDLGEDEED
GGEEMGVATCTKTKENISGCSSWTLRDEKEVKGDRRDMEETKDRGIQRSASPELESAVVP
RSPTASVDCPICQASFPASEIEMHAAYCDGEVAVVGERRVGGGRFQEVATLRRRKRRAGK
TAEETIRNLEKCYICQKVVPLSDYSQHTELCCLRPTSRTPAKGNLLSALKQTEKRDSVAG
PSGSKLQPQAVIDLREDDDDDDEEEEEEEEEAAEFRIRDSPIRFYTSISEATGCLIDFKK
QQRSKKPSQKRR
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggctctgagaaaacagctgagcaggaacatcttctcagacgaccaacaaacagaagaa
aacactcaggaggacgaatctgctgatgacggggacagtgggaaagagttcacttcttta
cttctggcaaagtcaccggcaagagagagacgccggaatgagagagcaaacaaacccaaa
gaggagatgacggaggaggagatgatggacctcgctcttcgtctgagtgaaaaggaagcc
agcgatgtcgcgttccagcaggagcaggagaaggaggctgtgatgaaggccatccaggaa
agcatggtcggacagacgcagccgtgcctcaactccccgagtaaaacggatcgctcccac
aggctcagctgtcgacggaggctctcgtacagggaggggctgtccgccgtcgatccggga
gcgccagtggacggctgcacagctgaaaacgacctgaagtcagaaacaaaaggacccgga
gacgaaaatgttagtaaaaagcggaaaaggagtgcaggaagtcctgaactggaggtgccg
ccctcgttccagagtcaggattctccctgcagcttggagtctctccctgctcctctccac
tccccacagagctcagactccacccagatcgacgacgctcacctccagaagtcccccgtc
tttgcgctaaccggacgcaacgtagcgctccacatcgaccgcctcaaacaggaactggtg
gacacctgcaggagctccggttttgtcctgtgctctcaggacagtttgaccatatctgaa
aagtctgctcaacccaggagccccacgtttccccgaagcaaccccacctcgtttcccaaa
agtccttttttctcaaagatggtccagggagaggacggagagactgagccgagtcctgag
tttagcagcaagggggcgtctccaagcgcctgcggacttcccaactgggaaaccgcagtg
ttcggattctcctcccaggacagtttaaccccctctgtgacgtccttttgccccaagagc
ccagtgttcccccgaagccccaatccccccaacgccccacttctcttagagggactgtca
gcctccagaagcaacggccgaaggaggaggaggtggaacgacgagcctcccatgagcccg
gtgtttggaaaaactccgtccgtcacaaatgtgcaggagaagtctctgaatccttcagct
gcaggttgtaaccgcgaggaggagctgcaccactggcagatgaaggatccaaagcccgat
ggaagtccacgtccctccagatctgaagagctgaatctaaaagcccagatgtccgccgag
tcggagccgccaagccagatggcgttagtctggtcggacgaagacgagcaagacgaagca
gatcaaacatttctcgtcagtcccgtcttcccagaggagagagctgctcctcaggcagaa
caccggacggcctcccagaaccacaaagctgcaggttctccgggggaacctgggccggac
tccagtcaggaaacggggaaacgtgatttggaactccacaaacgcacgttgccatccaca
tccaccagcaggctgcagatttccatcacagaagaagaactttctcccaccagcagacag
gaagcggctggcaacacccccccacccgaggagtccttaaaccagccgaccatccactac
tactggggggttcccttctgtcctcaaggcctggacccagacagatacactcaggtgatc
gtggcccagatggaggtttatgagaagagtctgaaacagactcagagggttctgctcagg
aaggctgagtggggggagggcatccagccgcagtcggagaagtcgccgtcgcccgatgca
ccgacgccgtctcctcagcctcaggttccaccgagaagaggactccgacggagaggcaga
aaaaggaatgacgcagtcgaggaagaagagaatgaagagaagaacgatggtgatgaagag
cagatggagaccgatgactgtgatgtttgtccagaaacacagctgagcgacgacggcact
caagacctgatcgtggtcaccgatggagcagaagagacgcatgctgagctgcaagaggga
gaggcgatcccccaagagggttctcccattagggatgatctgggtgaggacgaggaggac
ggaggagaggaaatgggagtggcgacgtgcacgaagacgaaggagaacatctcgggctgc
agcagctggactctgagagatgaaaaggaagtaaagggggacaggagggacatggaggag
acgaaggaccgagggatccaaagatcagcgtctcctgagctggagtcggcagtcgtccct
cgcagccccacggcgtccgtggattgtcccatctgccaggcgtcgttccctgcgagcgag
atcgagatgcacgcggcgtactgcgatggcgaggtggccgtcgtaggtgagaggagagtc
ggaggaggccgtttccaagaagtggcgactcttcgcagaaggaagaggagagcagggaag
acggctgaagagaccatcaggaacctggagaagtgttacatctgccagaaagtcgttcct
ctgagcgattacagccagcacacggagctctgctgccttcgtcccacctccaggacgcca
gcgaaggggaacctgctgtcggctctgaagcaaacagaaaaaagggattcagttgctgga
ccttctggatccaaactccaacctcaagctgtgatcgacctgcgggaggatgatgatgat
gatgatgaggaggaggaggaggaggaggaggaagctgcagagttccggatccgtgactct
cccatcagattctatacttccatctccgaagccaccgggtgccttatcgacttcaagaaa
cagcagcgttccaagaagccgagtcagaagcgaagatga
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