Nothobranchius furzeri (turquoise killifish): 107384501
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Entry
107384501 CDS
T05163
Name
(RefSeq) transcription factor Sox-19a-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107384501
Transcription factors [BR:
nfu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107384501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107384501
NCBI-ProteinID:
XP_015813262
UniProt:
A0A8C6M4D6
LinkDB
All DBs
Position
sgr10:174035..178525
Genome browser
AA seq
308 aa
AA seq
DB search
MYSMMEHELKPPGQTQTHQSHHTSPGMASITGNLTGSMGTNGNSHPKPACPPGSDPMDKV
KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDTEKRPFIDEAKRLRAVH
MKEYPDYKYKPRRKTKPLLKKDPPGAKYPLSAGNLLAAAAQNQGASPRMDGFGWAPTGTY
SGMQADPLGYTQPLHRYDLSALQYPPTMGPAQTYMSGTNSYSPMSYSTSPQQLSPVTMSM
VKAEPVTHSPSAGTQNHHRGALQGDLRDMISMYIPGPGGDSSDPATAQRGYTGVQQHYLT
GTVPLTHI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggagcacgagctgaagcccccgggtcagacacaaacccaccagagc
caccatacttcaccgggcatggcatcaattaccggaaacctcaccgggagcatggggacc
aacggaaactctcacccgaaacctgcgtgcccgccgggaagcgacccaatggacaaggtg
aagagacccatgaacgccttcatggtgtggtcccggggccagaggcggaagatggcccag
gagaaccccaagatgcacaactctgagatcagcaagcgtctgggggcggagtggaagctg
ctgaccgacaccgagaagcgtccgttcatcgacgaggccaagcggctccgggcggtccac
atgaaggagtacccggactacaagtacaagccccggcgcaagaccaagccgctgctgaag
aaggaccccccgggggccaagtacccactgtccgccgggaacctgctggcagcggcggcg
cagaaccagggcgccagtccccggatggacgggttcggctgggcgcccaccggaacctac
tccggcatgcaggcggacccgctcggatacacgcagcccctccaccggtatgacctgtcc
gccctccagtacccgcccaccatgggcccggctcagacctacatgagcggaaccaactcc
tacagccccatgtcctacagcaccagcccgcagcagctgagcccggtcaccatgtccatg
gtgaaggcagaaccagtgacccattcaccctcagcaggaacccagaaccaccaccgagga
gctctgcagggggacctgagggacatgatcagcatgtacatccctggaccaggaggggac
tcttcagacccggccacggcgcagaggggctacaccggggtccagcagcactacctcacc
ggaaccgtcccgcttacacacatctag
DBGET
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