Nothobranchius furzeri (turquoise killifish): 107384512
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Entry
107384512 CDS
T05163
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107384512
Spliceosome [BR:
nfu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107384512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
107384512
NCBI-ProteinID:
XP_015813286
UniProt:
A0A8C6M4N8
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All DBs
Position
sgr10:complement(577699..596488)
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AA seq
685 aa
AA seq
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MSSRRTDVKENQNLDKFSFKVDVVKLSSKKAGCGRKRPLEEGNNGHKPSNYKPKKHKKVS
GPSLTKNALVQLNEIRPGLQYKLLSQTGPIHAPVFVMTVEVNGQLFDGSGPTKKKAKMKA
AEKALCSFTQVLSAPDAHLAVSRTRPVLTDFTSDEADLPSMLFNAFETSVPVDVSLYLAS
SSSFSFLGEKCPFPCFPTSNQLQSPKPPEPSPFCSPTGGKNPVMILNKMRPGLKYDFVSE
SGESHAKNFIMSVSVGAQTFHGSGRNKKLAKARAAQAALSAAFNVQLDQAPSQQPIPREG
TQPHLPQVLADIVSRLVLGKFSELTDNLASPCAQRKVLAGVVMTTGTDLKEAQVICLSTG
SKCIRGEHRSHRGLALNDCHAEILARRALIRFLYCQMERFLSTDKKEQQESIFARCENKE
GYSLKDKVQFHLYISTSPCGDARIFSPHEAGLEQENRLPNPKARGQLRVKVDSGEGTIPV
SSSDSIQMWDGVQQRDRLLTMSCSDKMARWNVVGFQGSLMSYFTEPLYFSSIILGSLYNA
DHLSRAVYQRISEIQALPPSFSLNKPLLSGISNTETRQPGKAPNFSVNWTVGDQGVEVIN
ATTGKDDLDQPSRLCKHNLYGRWMGLYAKLSSTMRIRSVQPSSYHQVKQAAAHYQSAKQT
LFRTFHRAGLGAWVKKPTELDEFSL
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgtcgtacagatgtgaaggaaaaccaaaatttggacaagttctccttcaaa
gtggatgtagtcaaactctccagtaagaaggctgggtgtggaaggaagcggcctttagag
gagggcaacaatggccacaaaccttccaactacaagccaaagaagcacaagaaggtctct
ggaccctctctgactaagaatgcactggtgcagctgaatgagatcagacccgggctgcag
tacaagctgctgtctcagaccggacccatccacgctcctgtttttgtgatgactgtcgag
gtcaacgggcagctctttgatggctcaggacctaccaagaagaaggccaagatgaaggca
gccgagaaggctctgtgttctttcacccaggtcctcagtgcacctgatgcccacttggcc
gtgagccggactcgacccgttctcacagactttacctcagatgaggccgacctgcccagc
atgctctttaatgcttttgagacatcagtccctgtagatgtctcgctttacctggcctca
tccagctccttctcatttctgggggaaaagtgtcctttcccatgtttccctacatcaaac
cagctccaatcccccaaacccccagaaccatcccccttctgctcccccacaggtggcaaa
aatcctgtcatgatcctcaataagatgcggccaggcctcaaatatgattttgtgtcagag
agcggggagagccatgccaaaaactttatcatgtcggtgagcgttggtgctcagaccttc
catggatctggacggaacaaaaagctggctaaggctcgggctgcacaagcggctctgtct
gctgcctttaacgtgcagcttgaccaagctccgtcccagcagcccatacccagagaggga
acacagcctcacctgcctcaggtcctggcagatatcgtctctcgtttggttctgggcaaa
ttcagtgagctgaccgataatctcgcatctccatgtgctcaacggaaggtgctggcaggg
gttgtcatgacgacaggtacggatctgaaggaggctcaagtcatctgtttgtccacgggg
tcaaagtgcatccgtggagaacataggagccatcggggtttggctctgaacgactgtcat
gctgagatcttagctcggcgtgctctcatcaggttcctgtactgccagatggagcgcttc
ctcagcacagacaaaaaggagcagcaggaatccatctttgcgagatgtgaaaacaaagaa
ggctacagcctgaaggacaaggtccagttccacctgtacatcagcacctccccttgtgga
gatgcccggatcttctccccccacgaggctggactagaacaagagaaccgactcccaaat
cctaaggcccgtgggcagcttcgtgtgaaggtagactctggtgagggaaccatccctgtg
agctccagtgactccattcagatgtgggatggggttcagcagagggacagactgctcacc
atgtcctgcagtgacaagatggccaggtggaacgttgttgggttccagggttctttgatg
agctacttcactgagcctctgtacttctccagcattatcctgggaagcctgtacaatgca
gaccacctctccagggccgtgtaccagaggatctctgaaatccaagctcttcctccatcg
ttcagcctcaacaaaccacttctcagtggtataagtaacacagaaactcgtcaaccagga
aaagcaccaaacttcagcgtgaactggacggtcggagaccaaggtgtagaggtgattaat
gccaccacagggaaagatgacctggatcaaccctccagactctgcaagcataatctgtat
ggtcgctggatgggcctgtatgccaagctgtcctccacgatgcgaatccgaagcgttcaa
cccagcagctaccaccaggtgaaacaggcagcagcacactatcagtctgcaaagcaaaca
ctcttcagaacctttcacagagctggacttggagcctgggtgaagaagcctacagaactg
gacgagttttctctctga
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