Nothobranchius furzeri (turquoise killifish): 107384543
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Entry
107384543 CDS
T05163
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107384543 (ddx4)
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107384543 (ddx4)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107384543 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
107384543
NCBI-ProteinID:
XP_015813328
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Position
sgr10:complement(2703867..2953995)
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AA seq
627 aa
AA seq
DB search
MDDEWEEQETTTTTTTFTGFTSNGAGAERSSWKDDRREFGRGRGGREQGRGSENSDEGSW
NNERSGFRGRGRGQRFGSDQNGSHGNSEGGFGGRGRGGRGRFGSDGDNGGRGGFRGGYRG
KDEEDFSTGNSGDPEKEANGEERPRVTYIPPTLPEDEESIFFHYKSGINFIKYDDIPVEV
SGTNPPPAIMTFEEAGLCESLKKNISKSGYVKPTPVQKHGIPIISAGRDLMASAQTGSGK
TAAFLLPILQKLMADGVAASQFSELQEPEVIIVAPTRELINQIYLEARKFSHGTCVRPVV
VYGGVSTGYQIRDICRGCNVLCGTPGRLLDMIKREKVGLSKLKYLVLDEADRMLDMGFEP
DMRRLVGSPGMPSKENRQTVMFSATYPEDIQRLAADFLKVDYVFLAVGVVGGACSDVEQK
FVKVTKFAKREQLLDFLKNTGSERTMVFVETKRQADFIATFLCQEKVPTTSIHGDREQQQ
REQALRDFRTGKHPVLVATSVAARGLDIPDVQHVVNFDLPKEIDEYVHRIGRTGRCGNIG
RAVSFFDPDNDSQLAGALVSILSKAQQEVPPWLEECALSGPGGFNAARKMFSSTDSRKGP
NTGSFQQSSSQIQPAPAAAAEEDEEWE
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagtgggaagaacaggaaactacaacaactacaactacttttacaggcttc
acttctaacggtgcaggtgcagagaggagctcgtggaaagatgaccgcagagagtttgga
agaggtcgtggtggaagagagcaaggaagaggatctgaaaactcagatgaaggaagctgg
aacaatgaaaggagtggcttcagaggcagaggaaggggtcaaaggttcggatcggaccag
aatggatctcatggtaactcggagggtgggttcggaggacgaggaagaggaggcagagga
aggtttggatcagatggtgacaatggaggaagaggcggcttcagaggaggttaccgtggg
aaggatgaagaggacttctcaacaggaaactccggagatccagagaaggaggcaaacggc
gaggaacgacccagggtcacgtacatccccccgacgctccccgaggacgaagagtccatc
ttctttcattacaagtctgggatcaatttcatcaagtacgacgacatcccggtggaagtc
agcggcaccaacccaccacctgccatcatgacctttgaggaggcggggctctgtgagtcc
ctgaagaagaacatcagtaagtctggatacgtaaagccgactccagtccagaaacatggc
atccctatcatctctgctggccgagacctcatggcctctgcccaaaccggatccggtaaa
acggctgcgttcctgctgcccatcctgcagaagctgatggcggacggcgtggcagccagt
cagttcagcgagctccaggagcctgaagttatcattgtggctccaaccagagagctcata
aaccaaatctacctggaggcccggaagttctcacatgggacgtgtgtgcgcccagtggtg
gtttatggaggagtcagcactggctaccagatcagagatatctgcaggggctgcaatgtt
ctgtgtggaactcctggacgtctgttagacatgatcaaaagagagaaggttggtctgagt
aagctgaaatacctcgtgctggacgaagccgaccgcatgctagacatgggctttgaaccc
gacatgcgtcgtctggtgggatctcctgggatgccctccaaagaaaaccgtcagactgtg
atgttcagcgccacctaccctgaggacatccagaggttggcagcggacttcctcaaagtg
gactatgtgtttctggctgtgggggttgtgggcggagcctgcagtgatgtggagcagaag
tttgttaaggtcaccaagtttgccaagagggagcagctgctggacttcctgaaaaacacc
ggatcagagagaaccatggtgttcgtagagaccaagagacaagcagacttcatcgccaca
ttcttgtgtcaggagaaggttccaaccaccagcatccacggggaccgggaacagcagcag
cgtgagcaggccctgcgtgacttccgtactggtaaacacccggttctggtggccacgtcg
gtggcggctcggggtttggacatccctgacgtgcagcatgtggtgaactttgacctccct
aaagaaatcgacgagtacgtccaccgcattggcaggaccggtcgctgtggtaacatcggc
agagccgtgtccttctttgaccccgataatgacagccagttggctggtgccctggtgtcc
atcctgtccaaggcccagcaggaggtccccccctggttagaggaatgtgccttgagcggt
cctggaggcttcaacgctgccaggaagatgttttcctccacagactccagaaagggtccc
aatactgggtccttccagcaaagcagctcccagatccaaccagcccctgctgctgctgcc
gaggaggacgaggagtgggagtag
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