Nothobranchius furzeri (turquoise killifish): 107384767
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Entry
107384767 CDS
T05163
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107384767 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107384767 (taf6l)
03036 Chromosome and associated proteins [BR:
nfu03036
]
107384767 (taf6l)
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107384767 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
107384767 (taf6l)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107384767 (taf6l)
STAGA complex
107384767 (taf6l)
TFTC complex
107384767 (taf6l)
SAGA complex
107384767 (taf6l)
SLIK complex
107384767 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
107384767
NCBI-ProteinID:
XP_015813698
UniProt:
A0A1A8UG77
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All DBs
Position
sgr10:complement(10531558..10540288)
Genome browser
AA seq
639 aa
AA seq
DB search
MAADREERRFAEVSRDSVKLMAESAGLELGDEVAALLAEDVCYRLREAAQSSAQFMRHAK
RKKLTVDDFNKALRWSNVEAICGYGAQDAMLFRSVKEGELFFVEDRDINLIELALATNIP
KGCAETMVRANVAYLDGKGNVGPQGTVPAAVQSLSDDLLKYYQQITRAILGEDPHLMKVA
LQDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLV
SSVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYRQILLSLQKVLSD
PVRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVY
GAILVAVERLLKMKALSLPQPAEGCSSSQPGCLAGPMGYRVSSPGLSPPPEPLAEAGLGI
ASHLQAGGAGCQWEEWSPVPLPAMYSELYSFFGDSLAVRFSTEQSFGGFSPCTPSHFRET
RKEPLGHVSNPDTTRKMPQLTANLNISPRQDGSPRTDPPPPSLAATGSVRSLARSSMQRS
RASSSRSGQRSIGLSRDVFPKARFTSPHSGPPTFSFVIGGRQMGRRCQGRRPFQTIFVPT
PPPPVVLPRVYTHKLPVIGRVCKPLRRWTRSHYSLHLPL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaccgggaggagcgccgcttcgcagaggtttcccgggactccgtgaaactc
atggccgagagtgcgggcctggagctcggggacgaggtggccgcgctgctcgccgaggac
gtctgttaccggttgagagaagcagcgcagagcagtgctcagttcatgaggcacgctaaa
cggaagaagctgacagtggacgactttaacaaagccctgcgttggagcaatgtagaggct
atctgtggctacggggctcaggatgcaatgcttttccgctcagtaaaagaaggagagctt
ttctttgttgaagatcgagatatcaacctaattgagcttgctctggccaccaatattcct
aaaggttgtgctgaaacaatggtgcgagccaatgtggcgtaccttgatggtaaaggcaac
gtaggacctcaagggacggttcccgctgcagtacagtctctctcagatgacctcctcaag
tactatcagcagatcacacgggccatccttggagaggacccccatctcatgaaggttgct
ctccaggaccttcagtcgaactcaaagattgctgccctgctgccgtactttgtttatgtc
attagtggggtgaagtcggtaagccatgacctggagcaactcaacagactgctgcacatg
gtgaagagcctggttcagaacccctacctgtacctgggctcatatgtgcgcagcctcgtc
tccagtgttatgtactgcatcctggagccactggctgcctccatcaaccccctcaatgac
cactggaccctccgggactacgctgccctgctcctcagtcacatattctggactcatggt
gatctagtgagtggtctctaccgccagatcctgctttccctgcagaaggttctgtctgac
ccggtgaggccactctgttcccactatggagctgtggttggccttcatgctctgggatgg
aaggctgttgagagagtgctctttccacaccttcctgcctactgggccaacctccaggcc
gtgctggatgattactctgtgtctaatgctcaggttaaagcagatggacacaaggtttat
ggagccatcttggtggcggtggagcgtcttctgaagatgaaggctctgtctctgcctcag
ccagcagaggggtgttcaagctctcagccgggttgcctagcaggcccaatgggctataga
gtaagctctccaggtctcagcccccctccagagcctctagcggaagctggccttggaatt
gcaagccacctccaggcaggtggggccggctgtcagtgggaggagtggtccccagttcct
ctccctgctatgtattccgagctgtactcgttttttggagacagccttgccgtcaggttt
agcacagaacagagctttggcggcttctctccctgtactccgtcccattttagagaaacc
cggaaggaaccactcggccatgtctccaaccccgatacgactcgcaaaatgccacagctg
accgccaacctcaacatcagccccagacaggatgggagcccccgcactgatccaccccca
cctagccttgcggccacaggatcagtgaggtccttggctcgctcctccatgcagcgctcc
agagcttcctcatcgcgttcaggccagcgttccataggtctgtcccgtgatgttttccct
aaggctcgtttcacctcgcctcacagtggacccccaacattttcctttgtcattggtgga
cggcaaatgggtcgacggtgccaaggccgtcgcccttttcagaccatttttgtcccaacg
ccgccgcctcccgtggttctaccacgtgtttacactcacaaactgcctgtgattggcagg
gtgtgcaaacctttgaggcgctggacacgctcccattactcacttcatctgcccctgtag
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