Nothobranchius furzeri (turquoise killifish): 107384793
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Entry
107384793 CDS
T05163
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107384793 (lama4)
04518 Integrin signaling
107384793 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107384793 (lama4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_I
EGF_LMN_ATRN
Laminin_G_3
ConA_2nd_BAM2
Phage_scaffold
Motif
Other DBs
NCBI-GeneID:
107384793
NCBI-ProteinID:
XP_015813733
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All DBs
Position
sgr10:complement(11768668..11856717)
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AA seq
1882 aa
AA seq
DB search
MNQKAKTNMATRSLSSLCLFCIFSGLACPASATRLGEQEQTALKVCERGFFLSDKNLCLP
CNCKGHSDHCEDITGVCIKCRGHRIGDFCEMCEDGYILSLQPDGQLICSPCACPLAIPSN
NFAVHCDNAGQRCKCQEGYAGPHCERCAPGYYGNPLLVGSSCQRCDCNDNTDPNLIFNKC
HNVTGHCEHCWGNTAGARCERCAPGFYGDAINAKDCRECECSQCGTSSCDDRTGVCHCRP
GVTGQRCDKCEEGYSGFSSCQGCRRCECGPASLRSTCHPLTHSCPCRPGAGGRYCERCLP
GYWDYSPAGCSKCDCESGYCDMKTGECLLEATVNLCNNSCDACIWQLTEDVKVSSKTLDK
LRVGVLNISTGAAANDRLKYYNYTSQRLQKQFQSWQNKSSVMKSQTDELEETTDMVVLDI
KELQDSETLVKSLVNSLDKESDDTMTLSQQLNKNLTNLKSHIEEIILDWEVYNVNQDVDP
EVVRQNTETAHKTITWMRQLELSQKETTATDESTMSHDLLRQIRQLEKKQLITAGLLPSV
KEVLSRYSARLSESQTGLLKAASSVRETEDKNKASLLKLSRKEVKQQRMSEVHSAVNRTL
ETSRVFISDSERNVAEVDTLVKNVTQYHAAIDGASQELEKKMDPLSLVDRQLVQRADEHA
SELERQSNELEKDLRDSDANGFVQRAISAANVYNNIVKYIENANITSLTTFNLSRSAEDA
VSGINAQLEHLVKMSGHVFKESVSLHSEQNEVEGKVSDERKYVEEIQETMETNEMKLKEI
VNDIDEMQTDRTEQRLNHTLHVAQRTLHRSTEVLQTITPISSKVEEWATNMRNNQYSTAA
YEQAISSAGQAVEKLNVLVPELLNKLKVVEDKKPANNVTTNIMRVRELISQARSVVRKVQ
VSMRFNGQSSVEVHPHGNLEELKTVTSISLFLRVDPDKDPIEDRFILYLGERNGRKDYMG
LAIKNDNLVFVYNLGSEDVEIPLTSKPVSQWPAVFNHIKIERLGRHGKVFLTIPSQGSTD
EQKFIQKGEAPSSLFDVDPKNIVLFVGGAPEGVKLPPPLSLAPFVGCIELSSLNNGIISL
YNFKETHNMNVASSVPCSRYKLAFSESRIASYLFDGRGYALISNMERRAPFAVVTRFDIA
VRTVSKNGAVFLMVNRDKFFLLEIKNGFLNLVYDFGFTDGPKRFQDDSPKRQINDAKYHE
VTVIYHHSRKVILVVDKNLVKTFENPKTTLPFSDIYIGGAPSGILKARPELSSVVSLKGC
VKGFQFQKKDFNLLEEPGTIDISSGCPEESFMSREAYFTGKSFLGSTAKISPFDSFEAGL
NFRTQQSSGLLFYHREGSSEFSISLENGAVVLNNRGSKVKSHKKQYSDGRTHFLMASVNN
QKYSLVVDDKDKQEKKRSSATVPSPDSPVRTFYYGGSQSSSFKNFTGCISYAYINRQDQD
IEAEDFQKYKERVDVSLQDCPMQHPPAGLLSKERDYTSRAKQSLSQKVTRDKPSLSLNIQ
ELQSDDQVQTESRIEACYLSSTPTSTHQAFHFCGVANSRQHYTDLTDSFSESFNFSLSMK
TQSAFGLILYVSDVQEDNFVALFLAQGKLVFTFNVEDKKVKIQTEERFNDGTWHNIFLKR
HGSMGQVIINGFTGLEDRAQGNNIQWRMSDSLFIGGVPPGRGQKSIKRNSAYSFTGCLKN
AQLNGQKLSPLAETFGVSPCFEGPSEAGTYFSKEGGYVVLDESFDLGLRFELVMEVRPRV
ASGVLLHVRTGKGYFVIYIHQGEVVVLVNNGRNEFFTKVAPKQSVCDGSWHRITVIRDAN
VVQLNMDSAISHVVGPVSPSSTDTRKPVFIGGAPDFFLPDSIATRKPYVGCMKNLIINKS
QASFNKAVLVSGAVSIGSCPSA
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaaggcaaagacaaacatggctaccaggtctctgtccagtctctgtctcttc
tgcatcttctcaggacttgcctgtccagcttctgccaccaggcttggggaacaggagcag
actgcgctgaaagtgtgtgaaaggggttttttcctcagtgacaagaacctttgcctacca
tgtaactgcaagggacactctgaccactgtgaagacatcactggtgtttgcataaagtgc
agggggcacagaataggtgatttctgtgaaatgtgtgaagatggatatattctgagtctc
cagccggatgggcaacttatctgctcaccctgtgcctgtcccctcgccattccctccaac
aactttgctgtgcactgtgataacgccggccagcgttgcaaatgccaagaaggctatgct
ggacctcactgtgagcggtgtgctccaggttactatggcaacccactgctagttggaagt
tcctgccagaggtgtgactgtaatgacaacaccgaccccaacttgatcttcaacaaatgc
cacaacgtgaccggccactgcgagcactgctggggaaatacagccggagccaggtgtgag
cgctgtgctcccggtttctacggcgacgccatcaatgccaaggactgtagagaatgtgaa
tgcagccagtgtgggacatcttcctgcgatgatcggacaggggtgtgccactgcaggcca
ggagtcactgggcagcgctgtgacaagtgtgaggagggttactccggtttctccagctgt
cagggctgtcggagatgtgaatgtggaccagcctcccttcgctccacctgccatcccctc
acccacagctgcccatgtcgcccaggggccggaggtcgttactgcgagcgctgcctccca
ggatactgggattacagtcctgctggctgcagtaagtgcgactgtgagagtggctactgc
gacatgaaaaccggcgaatgcctgctagaggctacggtcaacctgtgcaacaacagttgt
gatgcctgtatatggcagctgactgaggacgtaaaagtgtccagcaagacactggacaag
ttgagggtcggagtgctgaacatctctactggtgctgctgctaatgacaggctcaagtac
tacaactacacctctcagcgcctccagaaacagtttcagagttggcagaacaagtcatct
gtgatgaaatcccagactgatgagctggaggagaccacggacatggtggtgctggacatc
aaggagctccaagactcggaaaccttggtgaagagtttagtgaacagcttggacaaagag
tcagacgacaccatgaccttgtctcagcaactcaacaaaaacctcacaaatctcaaatca
cacatagaagagattatcctggactgggaggtgtacaatgttaatcaggacgttgatcca
gaggtggtcagacaaaatactgaaacagcgcataaaacgatcacttggatgaggcaactg
gagctgtcccaaaaagaaaccactgccactgatgagtctaccatgagccatgacctgctg
agacaaatccgccagttggagaagaaacagctgattacagcgggtcttcttccatctgtc
aaagaggtcctgtcccgctactccgccaggctgtcagagagtcagactggtctgcttaaa
gctgccagttctgtgagggagaccgaggacaaaaacaaggccagcctccttaaattaagc
agaaaagaggtgaagcagcagaggatgagtgaggtccactcggctgtcaacagaacactg
gaaaccagtagagtgttcatctcagactctgagaggaacgtggctgaggtggatactcta
gtgaagaatgtgacccaataccatgctgccattgatggtgccagccaggagctggagaaa
aagatggaccctctctcgctggtggaccgacagctggttcagagggctgatgaacatgcc
tcagagttggagaggcagtcaaatgaactggagaaggatctgagggacagtgatgccaac
ggcttcgttcagcgagcaatcagtgctgccaacgtttacaacaacatagtgaaatacatc
gagaatgccaacattacctcactgaccactttcaacttgtctcgaagcgctgaagatgcc
gtctctgggatcaacgctcagctggaacacctggtaaagatgagcggacatgtcttcaag
gagtctgtttcattacattcagaacaaaacgaggtagaaggtaaagtgtctgatgaacga
aaatacgttgaggagatccaagagaccatggaaacaaatgagatgaagctgaaagaaata
gtgaacgacattgatgagatgcaaacagacagaacagagcagcgtctgaatcacaccttg
cacgtggctcaacggactctccaccgttcaactgaagtccttcagaccattactcccatc
agcagcaaggtggaggagtgggccaccaacatgaggaataaccaatactccacagctgct
tatgaacaggccatttcttctgctggacaagcagtggagaagctgaacgttcttgtgcct
gaactgttgaataagctgaaggtggttgaagacaagaagccagccaacaatgttaccacc
aacatcatgagagtccgagagctcatctcccaggccagaagtgtagtcaggaaggtccag
gtgtccatgaggttcaatggacagtcttcagtggaggttcatccacacggcaatctggaa
gagttgaagacagtgacatccatcagcctgttcctcagggtggacccggacaaagatcct
atagaagacaggttcatcttatacctgggagagcgaaatggccggaaagactacatgggt
ttggccatcaagaatgacaacctggtttttgtctacaacctcggaagtgaagacgttgaa
atcccactgacatcaaagcctgtcagccaatggcctgcagtcttcaaccacatcaaaata
gagaggctgggtagacatgggaaagtttttctgaccatccccagtcagggatctacagat
gagcagaagttcatccaaaaaggtgaagctccgagctccctttttgatgttgaccccaag
aatattgtgctgttcgtcggcggtgccccagaaggtgttaagcttccacctcctctgagc
ctcgccccttttgtgggctgcatcgagctgtcgtctctgaacaacggcatcatcagcctg
tacaactttaaagaaacccataacatgaacgtggcttcttcagtgccatgctcgaggtac
aagttggccttctctgagagtcggattgcaagctacttgtttgacgggagaggctatgcg
ctcatcagtaacatggagagaagagcaccgtttgctgttgtcacaagatttgatattgcc
gtacggacagtctcaaagaatggtgccgttttcctcatggtgaacagggataaattcttc
cttttggaaataaagaacgggtttttgaatttagtttatgactttggcttcactgacggg
ccaaagcgttttcaggatgactcaccaaagcgtcagataaacgatgcaaaataccacgag
gtgacagtaatctaccatcactccaggaaggtgatcctagtagtagacaagaacctcgtg
aaaacgtttgagaatcctaaaaccaccctgccgttctctgatatctatataggcggggct
ccttccggcatccttaaagccaggccagagttgtcctcggtggtcagtctgaagggctgt
gtgaaaggattccagttccagaagaaagacttcaacttgctggaggagcccggaactatt
gacatcagcagtggctgcccagaggagtcttttatgtctcgcgaggcatatttcactgga
aagagcttcctcgggtccacagcaaagatatcaccatttgacagctttgaagcggggctc
aacttcagaacacagcagagcagcggacttctcttctaccaccgtgaagggtccagcgag
ttcagcatctccctggaaaacggagccgtggttctaaacaacagaggatctaaagtcaaa
tctcacaagaaacaatacagcgatggaaggacacacttcttaatggcttcagtcaacaat
cagaagtattcactcgtggtggatgacaaagataagcaggagaagaaacgttcatccgcc
acagtcccctcaccagattcaccagtaagaactttctactatggaggatctcagagcagc
agctttaagaacttcacaggctgcatcagctatgcctacatcaacagacaagatcaggac
attgaggcggaggattttcagaagtacaaagagagggttgacgtgtctctgcaggactgt
cccatgcagcaccctcctgctggacttctgtcaaaggagcgagattacacttccagagcc
aaacagagcctatcacagaaggtcaccagagacaagcccagcctttctctaaacatacaa
gaactacaaagtgatgaccaggtgcaaacagagtcacgaatcgaggcttgttacctctcc
tcaactccaacgtcaacacaccaagccttccacttctgtggtgttgccaacagcagacag
cattacacagatctcactgactctttctctgagagtttcaacttttcattgtccatgaag
acacagtcggcctttggcctcatcttatatgtgtctgatgtccaagaagacaactttgtc
gctcttttcctggcacaaggaaaacttgtattcacattcaatgtagaggacaaaaaagtt
aaaatccagactgaggagagatttaatgatggcacatggcacaatatttttttgaagcgc
cacgggagtatgggccaggttataatcaatggcttcacagggctggaagacagagctcag
ggaaacaacatccaatggcgaatgagcgactcactctttattggaggagttcctccaggg
agaggccagaagagtattaagcggaactcagcctacagctttactggctgtttgaagaac
gctcagctgaacggacagaagttgtctcctttggcagagacatttggggtcagtccatgc
ttcgaaggaccgtctgaggcaggaacttatttctcaaaggagggaggatacgtcgttctg
gatgagtcctttgatctggggctgaggttcgagctggtaatggaggtgcgccctcgtgtg
gcatctggggtgctcctacatgtgcgcacaggaaagggctattttgtcatctacattcat
caaggggaggtggtggtacttgtaaacaacgggagaaatgagttctttaccaaagtagca
cccaaacagagtgtgtgtgatggaagctggcacagaatcacagtgatccgggatgccaac
gtggtgcagctgaacatggactcagccatcagccacgttgtgggacctgttagccccagt
tcaacagacacaaggaagccggtattcatcggtggagctccagacttcttcctcccagac
agcattgccaccagaaagccatacgtgggttgtatgaagaacctgatcatcaacaagagc
caggcaagctttaataaagcggttctggtcagtggcgctgtcagtattgggtcctgtcct
tcagcttaa
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