Nothobranchius furzeri (turquoise killifish): 107384801
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Entry
107384801 CDS
T05163
Name
(RefSeq) collagen alpha-1(X) chain-like
KO
K19479
collagen type X alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
107384801
NCBI-ProteinID:
XP_015813739
UniProt:
A0A9D2XST2
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Position
sgr10:complement(12146769..12149193)
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AA seq
601 aa
AA seq
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MGPPGPPGERGVGHTGPRGPPGPPGAPGHSQAGKPGTPGAPGKPGNPGIPGDKGATGATG
QMGPRGAPGTPGTPGPAGLSATGKPGPAGIAGAMGPRGEPGLKGHPGIPGLPGPAGERGI
GVPGVQGPPGPTGPMGPTGMPGKSGIGTPGATGYPGEPGKPGMPGRDGAPGPKGLPGPKG
HTGPPGVGSSGKPGQNGTPGMPGPMGPKGPQGPAGQPGSPGMPGVGKTGEAGIPGSRGAP
GTPGTTGQKGEPGPTGFTGHPGAPGPIGPAGPQGARGFQGESGPVGPKGDIGMVGAPGPR
GAKGEQGAQGFTGKPGIPGAVGPSGIPGHNGAQGPKGSQGHAGPPGLPGSNGAPGLKGHT
GPAGAPGKSGEPGRPGPVGPVGPPGPTGPAGLKGHPGHPGPPGPAGLTAKGVSGPQGPPG
LPGERGQDGLPGAAGPPGPPGPPGEVVYHHDKSMPIKSHEVMMPHEMMKAPMSAFSAVLT
VAYPPAGSPIQFNQVVYNGEQHYDPHSGVFTCQVPGLYFFSFHMHVNGANALVALYKNEE
PVVFTYDEYNKGFLDQMSGSAVLMLHPGDRVYVQVPDEESNGIFAADNVHCIFSGFLIAS
T
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggggccaccaggacctccgggagaaagaggtgttggacacacaggaccacgaggccca
ccagggcctcctggggccccaggccactctcaagcgggtaaacctggtaccccaggagca
ccaggaaaaccaggtaaccctggcattcctggtgacaaaggtgcaactggtgcaaccgga
caaatgggaccaagaggtgcacctggtacacctggaacccctggacctgctgggctttca
gctactggaaaacctggaccagctgggatcgctggtgcaatgggtccaaggggtgagcct
ggtttgaaggggcaccctggcatccctggtcttccagggcccgcaggagaaagaggcatt
ggtgtacctggagtccagggaccaccaggtccaactggaccaatgggcccaacgggtatg
ccaggcaaatctggaattggcactcctggtgccactggttatccaggagaacctggaaaa
ccgggcatgccaggaagagatggagcacctgggccaaagggattgccaggccctaagggt
cacactggaccaccaggtgtaggatcttcagggaagccaggtcagaacggtacgccaggt
atgcctggacctatggggcctaagggtccacagggtccagctggtcagccaggttcccct
ggtatgccaggtgttggtaaaacaggtgaggctggaattccaggaagcagaggtgctccc
ggcactccgggaaccactggtcaaaaaggagaaccaggcccaactggatttactggtcac
ccaggtgctccgggtccaattggcccagctggtccacagggtgcaagaggatttcagggt
gagtcaggtccagtgggacccaaaggtgacattggtatggtaggtgcaccaggtccaaga
ggagccaaaggtgagcagggagctcagggtttcactggaaaaccaggtatccctggggca
gtaggtccttcaggaattccaggtcataatggtgctcagggtccaaagggttctcagggt
catgctggtcctccaggtctccctggttcaaatggtgcacctggactaaaaggacataca
ggccccgcaggagcaccaggaaaaagtggtgaacctggtaggccaggaccagtgggacca
gttggaccacctggtccaacaggtccagctggacttaagggtcatccagggcacccaggt
ccacctggtccagctggtctgacggccaagggagtttctgggcctcagggtcctcctgga
cttccaggtgagagaggccaggatggtctccctggtgcggctggtcctcctggtccacct
ggtccaccaggagaagtagtctaccaccatgacaagagcatgccaatcaaatcccatgaa
gttatgatgcctcatgaaatgatgaaggctcccatgtctgcctttagtgctgtgctgacc
gtggcctacccccctgctggaagccccattcagttcaaccaggttgtttacaacggagag
caacactatgatccccacagtggtgtcttcacctgtcaggtcccaggcctttacttcttc
agctttcacatgcatgtcaatggtgccaatgcactggtggcactctacaagaacgaggag
ccggttgttttcacctatgatgagtacaacaagggtttcctggaccagatgtctggcagt
gctgttctcatgctgcatcctggtgacagagtgtatgtgcaggttcctgatgaggagagc
aatggtatatttgctgcagacaacgttcattgtattttctctgggttcttaattgcatca
acgtga
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