Nothobranchius furzeri (turquoise killifish): 107384860
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Entry
107384860 CDS
T05163
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107384860
Spliceosome [BR:
nfu03041
]
Common components
Common spliceosomal components
General mRNP proteins
107384860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
RBD_DEAH11
DUF8400
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
107384860
NCBI-ProteinID:
XP_015813826
LinkDB
All DBs
Position
sgr10:complement(14378800..14389638)
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AA seq
497 aa
AA seq
DB search
MADDLDIEAMLEAPYRKEDDKNPSPGEQEERNKRKKRSRSPDRKRSRDRKKSRSRERKRS
RSRDRRRSRSRERRRSHSRERGGRYKDHHKHRRRSKSKSPIKKEKSPIRLPVDNLTPEER
DARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEASSVPLA
IGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKALCGPMRLYVGSLHFNITEEMLRGIF
EPFGRIENIQLMMDSETGRSKGYGFITFSDTECAKKALEQLNGFELAGRPMKVGHVTERT
DPSMASSFLDNDEMDRTGVDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGAIAIGAL
AAVSAAMNPSLSMNMNPPPLSLPSQPIATHCFQLSNMFNPNSENAPRWEVDIQHDVIEEC
NKHGGVVHIYVDKNSAEGNVYVKCPSIPAAMASVNALHGRFFGGKMITASYVPLPTYHNL
FPESVTAMKLLAPPPRW
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacctggacattgaggcgatgctggaggctccgtaccggaaggaagacgac
aagaacccgagtcctggcgaacaggaagagcgcaacaagaggaagaagcgcagccgcagt
cctgacaggaagcgcagtcgggacaggaagaaaagccgcagtcgagagcgcaaacgtagc
cgcagccgagacagacgcagaagtcgtagccgagaacgtcggcgcagccacagtcgagaa
cggggggggcgctacaaagaccaccacaagcaccgcagaaggtcgaagagcaagagtccc
atcaagaaggagaagagtcccatcaggttacctgtagataatctgacaccagaggagcga
gacgcccggactgtgttctgcatgcagctggcagcccggatccgacctcgggatctggag
gagttcttctctgctgtgggaaaggttcgagacgtgaggatgatctctgacaggaactca
cgcaggtcaaagggcatcgcttacatcgagtttgtggaggccagctcagttcctctggcc
atcggcctgacagggcaaaggctgctgggagttcccatcatcgttcaggcgtcacaggct
gagaagaaccgggctgcagctgcagccaacaacctgcagaaggcattatgtggaccgatg
agactgtatgtcggctcgcttcacttcaacataaccgaggagatgctgcgtggaatcttt
gagccatttggacggattgagaacatccagctgatgatggacagtgagacgggtcgttct
aaaggctatggcttcatcactttttcagacactgagtgtgctaagaaagctctggagcag
ctgaacgggtttgagctggcgggtcggcccatgaaggtgggtcatgtgacggaaaggacc
gacccctctatggcttcatccttcctggacaatgatgagatggatcggaccggagtggac
ctgggaaccaccggcagactgcagctgatggctcggctggctgaaggcacgggcctgcag
atccctccagctgctcagcaggctctacagatgagtggagctatcgctatcggagcgctg
gctgctgtgtcagctgccatgaacccgtctctcagcatgaacatgaaccctccgcctctg
agtcttccatctcagccaatcgccacccactgcttccagctgtccaacatgttcaacccc
aacagtgagaacgctcccaggtgggaggtggacatccagcatgatgtcattgaggagtgc
aacaaacacggaggagtcgttcacatctacgtcgacaagaattcagctgaggggaacgtc
tacgtcaagtgtccgtccatcccagctgccatggcttctgtgaatgctcttcatggacga
ttctttggaggtaagatgatcacagcatcatacgtccccctgcccacctatcacaacctg
ttcccagagtctgtcactgccatgaagctgctggctccacccccaaggtggtga
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